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Heatmap: Cluster_94 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.6 -0.57 1.06 1.39 -0.02 -0.54 1.2 -0.05 -0.07 -0.48 0.29 -0.61 -1.07 -1.62 -3.01 -0.85
-7.84 - 1.49 1.97 1.07 0.95 1.68 -4.58 - - -0.39 0.3 - - - -
-5.35 -3.72 1.42 1.43 0.7 0.5 1.77 -0.46 -2.95 -1.81 0.81 -0.13 -3.7 -4.92 -4.44 -3.27
- - 2.27 2.75 0.61 - 1.35 -3.05 - - -2.3 - - - - -
-1.9 -0.24 1.53 0.8 1.61 0.73 0.97 -0.89 -2.68 -4.0 -1.49 -2.4 -0.1 -0.53 -2.17 -1.21
-3.63 -0.74 2.02 1.52 0.48 1.13 1.69 -0.28 - - -2.54 -1.33 - - - -2.4
-2.77 -1.4 1.66 1.77 0.78 0.14 1.63 -1.76 -3.24 -4.07 -0.94 -0.83 -1.67 -1.84 -0.96 -1.66
-3.04 -5.0 1.83 1.04 -2.32 -1.73 1.92 0.83 -5.29 -5.23 -1.23 0.5 -0.11 -2.31 -4.56 0.15
-7.08 - 1.8 1.93 1.41 -0.05 1.56 -0.83 -4.12 -4.65 -0.16 -1.33 - - -2.39 -
-0.39 0.05 0.5 0.58 0.27 0.0 0.34 -0.39 -0.36 0.02 -0.14 -0.14 -0.07 -0.8 -0.51 0.3
- - 2.24 2.34 0.23 -0.69 0.86 -2.42 - - -0.8 0.89 - - - -
- - 1.87 2.12 1.02 -0.18 1.94 -4.36 - - -1.48 -0.23 - - - -
0.14 -0.4 0.95 1.15 -0.43 -0.66 0.44 -0.21 -0.22 -0.16 -0.03 -0.19 -0.64 -0.77 -0.55 -0.2
-2.7 -0.59 2.08 1.86 1.33 0.54 1.21 -2.56 -5.58 -0.71 -3.13 -3.96 - -8.02 -5.61 -5.42
- - 2.29 2.03 0.69 -2.12 1.87 -0.24 - - -3.82 -0.7 - - - -
-7.29 - 1.58 2.08 1.05 1.29 0.98 -1.83 -0.67 -0.22 -1.98 -1.94 - -6.69 - -
-1.11 -2.07 1.65 1.79 0.9 0.31 2.01 -1.27 -2.81 -3.27 -2.85 -3.28 -2.59 -3.03 -3.43 -1.83
-2.51 -2.73 1.35 1.24 1.2 0.63 1.04 -0.12 -0.71 -0.8 -0.1 -0.6 -1.27 -1.61 -2.78 -1.82
-0.81 -1.47 1.15 1.17 0.07 0.34 0.53 -1.13 0.17 -0.19 -1.13 -0.2 0.26 -0.61 -1.04 -0.48
-1.68 -2.98 1.73 1.72 1.3 -0.04 1.08 -2.39 -2.58 -2.32 -0.07 0.24 -2.18 -2.59 -3.65 -2.16
- - 2.29 1.22 0.84 1.19 2.0 -5.59 - - -3.57 -0.67 - - - -
-8.32 -5.07 1.85 1.21 1.86 0.26 1.36 -1.45 -1.8 -2.27 -0.16 -0.25 -7.61 - -4.64 -7.74
-2.54 -1.6 0.85 1.92 -2.01 -3.71 0.74 0.93 -0.61 -2.44 -1.17 -1.5 1.44 -0.45 -1.84 -0.61
-4.86 0.39 2.07 1.7 0.25 0.59 1.21 -2.03 - -7.14 -0.58 0.07 -4.27 -4.14 - -2.98
- - 1.5 1.27 1.29 0.64 1.7 -1.78 -2.56 -1.02 0.21 0.47 - - - -
-1.34 -6.29 1.28 1.66 1.29 0.58 1.78 -1.88 - - -0.9 0.79 -4.64 -6.84 -5.58 -4.97
- - 2.69 1.17 -4.82 -3.4 2.19 -3.08 - - -0.47 0.82 - - - -
- - 1.9 1.98 -0.64 -0.13 1.95 -0.4 -2.8 -3.32 -0.04 -0.14 - - - -
-1.7 -3.65 0.59 1.3 0.38 -0.2 1.19 -0.21 -1.78 -1.4 0.51 0.14 0.1 -0.69 -1.46 0.09
- -9.02 1.38 1.69 1.36 0.28 1.79 -4.58 -7.83 -7.77 0.92 -0.01 - - - -
- - 2.13 1.94 0.95 1.18 1.44 -3.79 - - -3.76 -1.06 - -2.09 - -
-0.22 -0.36 0.79 1.27 0.74 -0.58 0.8 -0.81 -0.81 -0.6 0.03 -0.2 -0.73 -0.54 -0.89 -0.71
-5.63 -2.16 1.9 2.37 -0.78 -1.23 1.69 0.29 -2.47 -5.73 -2.38 -2.0 -4.41 -2.34 -1.89 -2.19
- - 1.82 1.94 0.24 0.94 2.21 -4.23 - - -1.2 -1.31 - - - -
- - 2.71 2.4 0.06 - 1.2 -4.34 - - -0.94 -2.04 - - - -
-0.63 -0.26 0.96 0.85 0.18 -0.37 1.09 -1.9 -7.98 -5.92 -0.51 0.09 0.48 -0.02 -0.66 0.72
-3.89 -2.2 1.93 1.91 0.46 0.44 1.67 -0.88 -2.1 -4.0 -1.21 -0.19 -4.11 -8.53 - -4.97
-1.97 -0.8 0.55 1.4 0.72 -0.2 1.41 0.01 -0.49 -1.48 0.82 0.73 -5.33 -3.47 -2.84 -3.06
-0.42 -1.15 1.25 1.35 0.56 0.34 0.48 -1.33 -0.12 -0.37 -0.64 0.57 -1.52 -1.54 -1.38 -1.21
-9.26 -1.24 1.36 1.76 1.66 0.09 0.95 0.45 -1.99 -1.0 -0.61 -0.65 -5.54 -6.63 - -7.66
-1.38 -1.63 1.66 1.12 1.2 -0.12 1.3 -0.82 -1.27 -1.24 0.04 -0.21 -1.43 -1.92 -3.84 -1.86
- - 2.04 2.11 1.16 -0.68 2.23 -6.97 - - -5.91 - - - - -
-5.09 -2.26 1.04 1.33 -0.2 -0.19 1.11 0.4 -0.69 -1.4 -1.25 -2.97 0.59 -0.06 -0.47 0.3
-3.98 -1.87 0.99 1.37 1.27 0.73 1.32 0.11 -0.83 -0.99 -0.22 -0.46 -2.83 -2.91 -2.42 -1.63
0.05 -0.99 1.01 1.32 -0.34 -0.24 0.94 0.06 -0.26 -0.48 0.24 -0.32 -0.82 -1.35 -2.5 -0.53
-0.82 -4.83 2.03 1.74 0.34 0.5 1.62 -4.04 -3.56 0.08 -1.88 -1.09 - -2.78 -4.04 -3.55
-6.05 -6.68 1.94 2.04 0.72 -0.66 1.55 -0.46 -4.06 -4.13 -0.52 -0.05 -4.05 -4.88 -4.4 -2.69
-1.45 -0.85 1.83 2.1 0.27 -0.31 1.53 -4.7 -1.8 - -0.11 0.11 - - - -
-1.62 -1.71 1.32 1.21 0.76 -0.14 1.53 -0.65 -1.14 -0.8 -0.48 1.01 -2.06 -5.55 -3.48 -1.67
-4.89 - -1.82 -1.91 -2.36 -2.76 -2.06 -3.21 -7.86 -5.29 -5.76 -3.75 2.64 1.25 -0.85 2.44
-2.56 -2.42 1.04 2.22 1.01 -0.68 1.62 -2.39 -2.73 -3.38 -2.77 -2.71 -0.56 -1.0 -0.94 -0.35
- - 2.28 1.83 1.09 0.33 1.37 -4.2 -8.97 -8.91 -2.36 -0.51 -1.96 -2.31 -4.71 -2.68
-5.43 - 2.78 2.32 1.43 -0.47 -0.5 - - - - - - - - -
-2.45 -0.24 1.31 1.05 0.07 0.11 1.21 -1.04 -3.04 -1.37 -0.82 -0.67 0.3 0.45 -1.64 -0.21
- -5.11 1.9 2.03 0.28 -0.09 2.0 -3.42 - - -0.91 -0.26 -3.66 - -2.69 -1.79
-4.07 -4.79 2.07 2.01 -0.71 -0.37 1.79 -1.93 -3.25 -2.54 -1.18 -2.08 -3.0 -3.6 0.33 -2.92
- -8.68 1.64 2.07 -3.56 -6.54 1.59 0.83 -10.1 - - - -0.18 -0.18 -0.24 0.26
-2.66 -2.97 1.0 1.54 -1.35 -0.98 0.47 0.29 - - - - 1.22 0.55 -0.49 1.48
- - 1.83 1.62 2.36 -0.68 1.7 -6.35 -9.25 - -1.57 -5.94 - - -5.92 -
-0.99 -0.45 0.7 0.42 -0.46 -0.15 0.57 -0.12 -0.3 -0.58 -0.03 -0.21 0.3 0.2 -0.74 0.55
-7.65 -8.39 1.82 2.11 0.84 0.72 1.53 -5.57 - -7.26 -2.37 -2.08 -1.27 -1.85 -2.41 -1.05
-6.77 -5.52 2.0 1.79 1.25 -1.09 2.13 -1.94 - - -2.33 -0.48 - - -3.1 -
- -7.83 1.97 2.46 1.4 -0.56 1.54 -3.38 -5.54 -5.96 -2.93 -4.36 -5.41 -7.5 - -5.53
-2.9 -1.83 1.04 0.36 -0.44 -1.26 0.86 0.24 -1.91 -1.31 -0.19 0.26 -0.11 0.65 1.1 -0.48
- -1.75 1.99 1.28 1.45 1.16 1.33 -1.02 -2.27 -3.11 -1.13 -0.93 -6.45 -9.13 -7.06 -5.35
-5.63 - 0.73 1.12 -0.71 -0.47 0.26 0.16 -1.47 -2.26 -1.49 -3.65 1.48 0.42 0.34 1.08
-1.12 -1.31 0.78 1.27 -0.17 0.1 0.51 -0.27 -0.54 -0.06 -1.57 -1.8 -0.8 -0.7 1.42 -0.63
-1.63 -0.62 1.27 0.78 0.61 0.06 1.33 0.03 -1.04 -0.84 0.35 0.63 -1.73 -1.99 -2.5 -2.38
-1.93 -1.03 0.96 -0.03 -1.11 0.34 -0.19 -4.01 -1.79 -3.31 -4.28 -1.06 1.43 0.46 -0.47 1.98
-2.84 -0.77 1.91 0.77 1.74 0.77 1.05 -0.82 -2.84 -3.08 -1.22 -0.7 -2.9 -2.26 -1.69 -2.59
- -4.29 2.08 1.67 0.92 -0.48 1.49 0.65 -3.17 -4.43 -1.31 -0.7 -4.15 - -3.18 -2.28
-1.96 -0.17 1.33 1.54 0.62 0.01 1.46 0.78 -1.12 -1.83 -0.38 -0.39 -5.1 -9.01 -6.93 -3.18
-2.64 - 0.25 1.5 -1.54 -1.95 0.04 0.14 -0.93 -1.01 -1.1 -2.08 1.66 0.15 0.22 0.93
-1.2 -1.87 1.63 1.8 0.96 -0.07 0.68 -1.61 -2.11 -1.55 0.1 0.07 -1.26 -1.82 -2.54 -1.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.