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Heatmap: Cluster_219 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
3.55 5.05 27.32 20.81 64.27 28.96 24.26 3.86 4.65 9.29 13.13 17.93 21.61 44.08 23.05 11.7
0.03 0.62 2.92 6.91 26.79 10.17 0.03 0.39 4.38 4.34 5.93 4.76 0.7 0.24 4.8 0.16
0.04 0.18 1.88 0.45 8.42 1.17 3.65 0.02 0.0 0.0 0.0 0.0 0.24 0.0 0.24 0.22
6.32 0.03 38.42 45.47 93.58 35.11 36.06 15.95 0.47 0.56 1.72 11.02 3.55 9.96 21.26 3.26
0.0 0.0 12.63 16.33 218.58 25.37 1.08 0.27 0.99 0.47 0.79 0.53 0.0 0.0 0.0 0.0
0.0 0.0 22.37 14.32 48.31 7.27 10.15 0.01 0.0 0.0 0.0 0.43 0.0 0.0 0.0 0.0
60.41 259.23 565.93 611.48 1116.9 534.6 309.32 206.59 99.45 114.08 230.83 395.31 44.39 46.64 73.44 45.18
0.0 0.0 852.4 548.79 1744.34 520.52 552.89 7.65 0.0 0.0 42.2 628.73 0.0 0.0 10.34 0.0
0.26 0.1 5.14 1.69 11.27 4.25 3.84 0.11 0.26 0.13 0.83 0.21 0.17 0.18 0.62 0.49
0.0 0.0 3.19 1.46 13.64 2.05 1.04 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0
0.18 0.21 64.63 76.2 273.85 73.71 117.06 2.31 7.04 3.1 14.6 19.56 0.0 0.58 4.84 0.23
0.13 0.44 3.78 2.25 9.32 1.63 1.65 0.29 0.59 0.61 0.38 1.05 0.0 0.14 0.0 0.27
1.13 2.05 6.85 7.69 83.95 7.78 3.05 0.8 1.5 1.04 9.27 9.06 102.06 14.64 14.33 4.12
14.72 4.27 43.34 42.11 77.21 24.03 8.94 3.2 5.15 7.54 22.55 14.03 3.69 2.13 1.45 5.76
5.76 6.24 27.64 12.88 67.78 10.53 2.86 0.95 0.62 0.54 7.68 8.37 0.52 1.1 0.51 0.36
0.65 0.5 3.44 3.41 10.1 3.32 0.28 0.19 0.18 0.38 1.37 1.28 0.62 0.14 0.91 0.42
0.0 0.0 59.19 69.43 501.14 167.81 154.74 0.99 0.0 0.0 101.33 83.48 0.0 0.0 0.0 0.0
0.8 2.21 12.61 8.07 60.23 17.33 8.22 0.05 0.5 0.64 9.0 1.11 0.49 0.23 0.19 0.0
0.09 1.48 2.63 4.94 10.37 2.27 5.24 0.37 0.07 0.04 0.07 0.1 0.86 0.64 1.02 2.13
0.0 0.11 2.44 5.36 16.21 6.73 7.88 0.31 0.04 0.12 1.5 1.13 0.0 0.14 0.19 0.27
0.0 0.0 2.55 4.28 14.4 0.44 0.14 0.0 0.0 0.0 0.5 2.78 0.0 0.0 0.0 0.0
0.02 0.38 17.44 52.3 389.67 33.82 29.84 0.1 0.0 0.0 0.88 1.51 0.0 0.0 0.0 0.0
0.02 0.0 1.07 1.07 7.1 2.7 1.69 0.86 0.0 0.0 0.04 0.54 0.43 0.5 0.42 0.1
0.0 0.0 11.84 5.58 58.63 9.97 11.6 0.6 0.0 0.0 0.1 0.53 0.61 0.06 0.48 0.45
0.0 0.0 2.55 1.77 9.84 4.36 1.47 1.59 0.1 0.52 0.96 1.85 0.0 0.0 0.0 0.0
2.7 0.65 5.25 5.52 13.34 6.09 0.56 0.43 0.98 0.47 0.9 0.56 1.65 0.94 1.41 3.16
0.02 0.0 2.64 1.01 5.98 1.68 2.12 0.0 0.0 0.0 0.33 0.57 0.11 0.31 1.54 0.0
0.48 0.0 5.96 7.71 16.28 1.57 6.61 2.72 0.0 0.08 0.16 0.26 0.0 0.45 0.57 0.0
0.11 3.4 19.27 21.09 55.75 23.93 17.23 11.44 9.15 2.32 7.02 8.07 0.27 0.3 0.0 0.25
0.0 0.0 2.57 1.83 4.75 1.23 1.36 0.01 0.0 0.0 0.48 0.48 0.0 0.0 0.0 0.0
0.0 0.0 2.83 4.04 14.72 2.43 1.01 0.17 0.0 0.24 0.06 0.23 0.0 0.0 0.0 0.0
0.0 0.0 2.92 9.75 34.79 9.2 2.72 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0
0.0 0.09 4.92 5.07 13.31 3.88 1.86 0.07 0.0 0.0 2.7 2.37 0.0 0.0 0.12 0.0
0.21 0.0 6.5 4.05 17.83 6.72 2.93 1.82 0.09 0.04 0.2 2.25 0.14 0.09 0.19 0.04
5.72 1.08 16.51 16.36 399.97 43.6 0.44 0.61 0.06 0.29 4.43 6.75 152.6 25.21 259.61 23.84
0.91 7.19 10.45 6.81 73.72 14.71 2.71 0.57 1.69 4.44 7.45 10.51 3.13 12.85 3.99 0.85
0.21 0.72 31.9 36.73 196.47 60.23 12.43 1.82 3.69 1.58 19.55 15.89 0.38 0.13 0.09 0.35
15.36 7.8 1034.89 741.5 2126.01 528.15 4.27 14.21 250.82 276.16 58.49 149.85 23.75 129.53 160.88 22.46
0.09 0.4 2.5 1.19 12.47 2.95 0.45 0.09 0.0 0.09 2.85 2.81 0.42 0.19 0.0 0.38
4.55 1.57 32.67 25.93 66.83 28.23 13.05 7.3 0.03 0.66 11.5 15.26 4.44 4.31 3.65 7.86
5.22 5.65 10.37 10.95 18.04 6.78 3.09 2.84 3.62 4.42 5.39 4.9 9.11 6.69 7.89 9.17
0.04 0.3 1.57 0.64 6.52 3.6 2.69 0.03 0.05 0.05 1.3 1.4 0.0 0.0 0.0 0.0
0.0 0.0 0.1 0.0 2.14 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.76 0.36
0.0 0.0 16.68 36.31 318.83 11.69 0.43 0.01 0.0 0.0 0.57 0.27 0.0 0.0 0.0 0.0
0.0 0.0 3.71 11.41 190.3 4.74 2.04 0.02 0.0 0.0 1.19 1.26 0.0 0.0 0.0 0.0
0.0 0.77 1.44 1.17 19.23 0.65 0.41 0.0 0.0 0.0 0.43 1.21 0.0 0.0 1.92 0.0
26.01 4.96 1034.4 431.97 1912.66 425.94 259.56 11.79 32.57 7.7 126.3 241.44 8.03 23.04 54.49 20.58
3.03 0.47 16.86 14.26 43.19 17.33 17.68 3.4 0.99 1.54 7.08 11.49 3.38 2.81 1.51 6.92
0.0 0.02 0.08 0.13 7.57 0.92 0.0 0.01 0.02 0.0 0.02 0.16 0.0 0.1 1.07 0.0
0.04 0.0 2.75 1.36 5.99 0.87 0.52 0.0 0.0 0.0 0.0 0.0 2.33 1.74 0.92 0.96
0.0 0.06 0.0 0.26 48.5 7.07 0.0 0.03 2.76 2.55 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 56.26 0.0 200.67 20.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.06 0.0 0.14 0.04 0.5 0.03 0.18 0.01 0.0 0.0 0.0 0.0 0.0 0.37 0.0 0.0
0.02 0.0 0.09 0.08 0.69 0.15 0.02 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.23 0.0
0.0 0.0 1.28 24.43 66.24 0.9 0.0 0.0 0.0 0.0 6.88 5.27 0.0 0.0 0.0 0.0
10.97 39.5 49.82 71.8 154.48 53.14 108.44 5.91 8.12 3.98 39.1 39.18 1.63 0.67 1.02 2.63
0.0 0.08 36.49 11.45 69.65 13.01 1.25 0.49 0.0 0.0 0.3 0.56 0.0 0.0 0.0 0.0
0.0 0.0 1.9 1.26 5.9 0.62 0.65 0.01 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0
1.1 18.75 39.46 92.74 665.86 110.96 0.0 1.43 3.49 0.0 3.84 10.52 43.16 100.97 763.5 118.85
0.0 0.0 1.69 6.14 27.65 4.1 4.1 0.03 0.0 0.0 0.4 1.06 0.0 0.0 0.0 0.0
0.02 0.0 0.72 0.91 7.67 2.24 0.0 0.0 0.0 0.0 0.15 0.14 0.0 0.0 0.46 0.0
0.03 0.02 6.3 4.71 21.32 9.9 5.91 0.02 0.08 0.02 0.07 0.36 0.0 0.0 0.0 0.0
0.44 0.22 3.91 7.64 66.87 4.78 0.58 0.61 0.2 0.31 1.18 0.1 1.24 0.47 0.49 0.46
0.0 0.11 39.37 9.29 116.05 32.53 29.54 0.13 0.0 0.0 0.07 0.12 0.0 0.0 0.0 0.0
0.0 0.0 1.49 0.83 6.47 0.7 3.52 0.02 0.0 0.0 0.1 0.98 0.0 0.0 0.44 0.0
0.0 0.0 0.35 0.73 7.42 0.34 1.09 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.03 0.0 0.38 0.8 5.28 0.37 0.36 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.92 0.26 105.87 0.41 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.31 0.0
0.13 0.0 0.66 0.83 3.57 1.08 0.14 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.27 0.0
16.82 13.2 44.49 36.89 64.56 22.69 12.26 3.17 1.26 0.69 7.83 6.5 10.15 10.35 5.96 9.59
8.48 215.69 129.86 292.77 1065.17 96.98 18.44 33.02 6.78 1.6 6.68 12.23 3.05 0.12 0.5 1.64
0.39 0.0 3.79 4.44 12.51 6.16 3.59 0.01 0.0 0.03 0.52 0.18 0.0 0.0 0.0 0.0
0.65 0.29 0.9 0.56 2.1 0.56 0.89 0.52 0.3 0.03 0.27 0.33 3.67 2.71 2.08 3.31
0.95 7.49 38.55 16.48 69.63 16.66 4.56 21.08 3.09 3.88 4.92 6.62 17.75 24.86 36.36 15.95
0.0 0.0 2.61 3.49 13.07 1.96 6.05 1.05 2.14 4.45 1.03 1.4 0.0 0.0 0.2 0.0
8.0 8.38 112.13 159.8 774.24 104.12 1.88 1.51 6.23 3.13 69.62 104.18 130.3 39.3 201.93 27.83
0.01 0.05 1.63 1.9 4.58 1.83 2.73 0.35 0.06 0.0 0.22 0.29 2.37 1.56 2.18 1.29
0.0 0.0 0.23 0.49 7.51 0.15 0.63 0.16 0.0 0.0 0.0 0.0 0.0 0.27 0.0 0.0
0.53 1.48 45.87 13.25 231.92 90.61 98.42 4.03 1.33 1.21 1.32 3.13 0.0 0.09 0.39 0.36
0.48 0.01 4.44 3.84 29.12 5.09 0.74 3.46 1.25 2.15 5.41 5.03 2.05 4.67 3.7 3.64
11.71 12.15 41.39 58.29 262.16 25.27 7.42 2.22 2.25 2.66 57.1 83.09 88.05 37.2 57.94 24.69
0.02 0.02 4.69 8.83 131.41 17.92 0.02 0.0 0.22 0.18 6.16 8.81 55.91 15.42 22.78 1.96
0.02 0.0 1.51 3.58 11.77 3.89 2.01 0.06 0.0 0.0 0.05 0.04 0.0 0.0 0.0 0.0
15.69 0.0 51.45 40.95 380.32 12.95 0.09 0.43 0.0 0.11 2.97 31.14 2.02 0.0 74.54 25.11
0.17 0.0 1.05 1.24 3.82 1.28 0.62 0.89 0.0 0.0 0.0 0.02 0.68 0.38 0.12 0.34
0.49 0.0 23.17 8.1 68.17 31.22 5.11 0.56 0.04 0.0 1.0 1.83 0.2 0.23 0.2 0.09
0.54 0.94 8.52 17.64 41.89 6.96 25.4 1.06 0.55 0.91 2.24 1.65 2.45 0.77 1.9 1.43
0.0 0.0 9.55 34.18 87.34 9.22 3.1 8.33 2.18 3.51 10.11 14.65 0.0 0.0 0.0 0.0
0.0 0.0 5.98 22.31 52.97 11.07 11.3 0.04 0.0 0.0 0.95 1.57 0.0 0.0 0.0 0.0
0.0 0.0 24.85 66.15 154.29 19.0 86.85 0.3 0.0 0.0 7.56 13.22 0.0 0.0 0.0 0.0
13.39 12.83 32.78 26.4 61.08 34.15 15.16 20.74 13.11 10.16 22.22 18.79 6.7 6.19 5.69 8.73

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)