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Heatmap: Cluster_182 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.42 1.47 -1.59 -2.03 -1.69 -0.47 -0.29 0.9 0.52 0.48 0.85 0.55 -1.21 -1.75 -1.67 -1.08
0.27 0.64 -2.22 -1.74 -1.73 -0.97 0.36 -0.68 0.7 0.49 0.74 0.43 0.23 -0.05 -0.83 0.33
0.57 1.16 -1.49 -1.42 -0.9 -0.65 0.04 -1.03 0.49 0.67 0.62 0.43 -0.26 -0.8 -1.19 0.17
-0.12 0.84 -1.94 -1.53 -1.72 -0.98 -0.53 -0.42 0.1 0.16 0.21 0.07 0.54 0.39 -0.6 1.39
0.11 0.37 -1.58 -1.82 -0.76 -1.12 0.26 -1.02 0.3 0.36 0.77 0.43 0.53 0.32 -0.38 0.3
-0.21 0.92 -1.75 -1.48 -1.19 -0.7 0.76 -0.58 0.61 0.07 1.11 0.56 0.05 -0.83 -1.37 -0.03
0.79 0.85 -0.76 -0.98 -1.11 -0.65 -0.31 -0.9 0.4 0.37 0.53 0.62 -0.33 -0.48 -0.8 0.32
0.92 1.03 -1.11 -1.29 -1.3 -0.71 -0.05 -0.43 0.41 0.05 1.05 0.47 -0.52 -1.03 -1.21 0.03
0.47 0.67 -0.76 -1.17 -0.46 -0.82 0.07 0.12 0.01 -0.97 -0.56 0.41 0.39 0.55 0.26 0.07
0.6 1.33 -2.03 -2.38 -2.17 -0.8 -0.88 -1.13 1.0 0.21 0.26 0.5 -0.07 -0.23 -0.69 0.63
0.33 0.61 -1.28 -1.04 -0.32 0.29 0.55 -2.09 0.45 0.54 0.85 0.44 -0.52 -0.3 -0.85 -0.86
0.65 0.65 -1.05 -1.29 -0.98 -0.41 -0.11 -1.52 0.06 0.38 0.58 0.52 -0.09 -0.26 -0.24 0.63
0.8 0.54 -1.65 -2.28 -1.15 -0.25 -0.0 -0.33 0.44 0.11 0.43 0.55 -0.01 -0.11 -0.0 0.05
-0.12 0.37 -1.27 -1.05 -0.73 -0.46 0.27 -0.56 0.75 0.35 1.05 0.48 -0.44 -0.58 -0.64 0.27
0.1 0.49 -0.82 -0.38 -0.28 0.09 0.09 -0.32 0.5 0.47 0.66 0.31 -0.27 -0.72 -0.72 -0.35
-0.21 0.44 -1.48 -1.12 -0.62 -0.98 -0.11 -0.31 0.36 0.25 -0.18 0.19 0.88 0.21 -0.36 0.84
1.36 1.59 -5.55 -4.48 -3.84 -2.78 0.32 -1.05 0.78 0.61 1.45 1.25 - -4.0 - -
0.73 0.83 -0.93 -1.16 -0.95 -1.04 0.05 -0.95 0.58 0.6 0.61 0.07 -0.5 -0.17 -0.31 0.06
1.02 0.89 -1.78 -1.89 -1.34 -1.48 0.34 0.23 0.48 0.08 -0.06 0.69 -0.48 -0.33 -0.16 -0.08
0.23 0.62 -0.77 -0.58 -0.33 -0.45 -0.05 -0.73 0.21 -0.24 0.09 0.53 0.23 0.27 -0.51 0.42
0.6 0.44 -1.53 -1.39 -0.89 -0.07 -0.03 -0.93 0.33 0.37 0.47 0.44 0.2 0.04 -0.56 0.33
0.58 0.72 -0.61 -0.63 -0.36 -0.46 -0.14 -0.52 0.7 0.34 0.0 0.66 -0.49 -0.51 -0.54 -0.22
0.31 0.66 -1.16 -0.66 -0.63 -0.24 0.16 -1.01 0.24 0.79 0.48 0.68 -0.43 -0.25 -1.02 -0.0
-0.02 0.54 -3.45 -2.61 -2.97 -2.5 0.14 -1.33 0.77 1.21 1.36 0.91 -0.25 -0.56 -0.97 0.02
0.5 0.69 -0.99 -1.34 -0.56 -0.51 0.16 -0.64 0.4 0.27 0.62 0.48 -0.32 -0.34 -0.07 -0.08
-0.03 0.56 -1.54 -1.61 -0.97 -0.65 0.28 -0.16 0.46 0.22 0.42 0.59 0.08 -0.06 0.02 0.26
0.41 0.92 -1.12 -1.2 -0.87 -0.19 -0.39 -0.73 0.5 0.21 0.31 0.39 -0.03 -0.15 -0.54 0.48
0.01 -0.08 -1.71 -2.86 -1.79 -1.14 -0.27 -0.83 -0.75 0.2 -0.08 -0.2 1.18 1.3 0.61 0.72
0.87 0.73 -0.86 -0.89 -1.25 -0.54 0.19 -0.13 0.48 -0.68 0.28 0.44 -0.1 -0.45 -0.53 0.4
0.41 0.97 -1.45 -1.48 -1.3 -1.05 0.7 -0.21 0.55 0.31 0.6 0.66 -0.9 -0.59 -0.78 0.05
0.15 0.47 -2.35 -2.47 -1.0 -0.85 -0.4 -1.0 0.35 0.1 -0.2 0.04 1.02 0.76 0.14 0.81
0.78 1.21 -0.74 -0.85 -0.11 -0.42 0.21 -1.22 0.34 0.65 0.81 0.64 -1.39 -1.73 -1.89 -1.08
0.01 0.38 -1.15 -1.2 -1.2 -0.55 -0.07 -0.67 0.21 -0.05 0.23 -0.3 0.32 0.41 0.87 0.66
0.23 0.19 -1.76 -1.42 -0.9 -0.49 0.02 -1.43 -1.38 -0.1 0.63 -0.14 1.15 0.54 -0.23 1.06
0.29 0.25 -0.65 -0.47 -0.54 -0.73 0.26 -0.92 0.06 0.23 0.62 0.67 -0.02 -0.27 -0.26 0.29
0.55 1.08 -4.81 -3.48 -2.03 -2.26 -0.95 -0.03 -0.18 -0.6 0.83 0.4 0.53 0.12 -0.46 1.29
-0.48 0.22 -3.19 -2.36 -2.36 -1.53 -0.4 -0.31 0.9 0.39 1.0 0.66 0.57 0.06 -0.94 0.93
0.06 0.54 -0.78 -0.36 -0.44 -0.63 -0.0 -1.68 -0.17 0.64 0.26 0.63 -0.1 0.07 -0.57 0.66
0.64 0.98 -1.71 -1.23 -0.5 -0.44 0.33 -1.01 0.35 0.58 0.88 0.42 -0.42 -1.17 -1.26 -0.03
0.25 0.68 -0.28 -0.65 -0.16 -0.21 0.38 -0.18 0.46 0.44 0.38 0.8 -1.01 -0.93 -1.18 -0.84
0.49 0.84 -1.65 -1.27 -1.29 -1.08 0.34 -0.84 0.18 0.28 0.64 0.83 -0.28 -0.32 -0.39 0.37
-0.37 0.57 -1.39 -1.16 -1.23 -0.59 0.5 -0.35 0.53 0.25 0.78 0.53 0.07 -0.13 -0.27 0.06
0.22 1.01 -0.89 -0.98 -1.29 -1.27 0.2 -0.75 0.61 1.09 1.02 0.7 -1.16 -1.45 -1.32 -0.53
0.13 0.77 -0.5 -0.41 -0.35 0.26 0.44 -0.86 0.03 0.37 0.87 0.63 -0.95 -0.79 -0.85 -0.99
0.34 0.32 -2.14 -1.66 -0.69 -1.67 -0.19 -0.21 -0.21 -0.25 -0.34 0.17 0.63 0.49 0.3 1.3
0.12 0.85 -1.65 -1.18 -1.11 -0.85 -0.09 -1.08 0.21 -0.21 0.37 0.23 0.63 0.41 -0.53 0.89
0.55 0.66 -4.29 -2.37 -2.57 -1.51 -1.37 0.01 -0.54 -0.56 0.34 -1.02 0.76 0.66 -0.08 1.79
-0.16 0.95 -0.67 -1.05 -0.35 -0.28 0.07 -0.87 -0.29 -0.05 0.47 0.63 -0.09 0.25 -0.16 0.17
0.06 0.78 -1.2 -1.19 -0.89 -0.66 0.19 -0.07 0.53 0.32 1.01 0.96 -0.58 -0.87 -1.08 -0.39
0.8 0.67 -0.85 -0.66 -0.98 -1.01 -0.14 -1.01 -0.17 0.51 0.76 0.92 -0.6 -0.59 -0.39 0.12
-0.18 0.5 -2.47 -1.69 -1.33 -1.07 0.18 -0.57 1.02 0.87 1.26 0.69 -0.43 -0.92 -1.95 0.17
0.13 0.8 -0.77 -1.22 -0.28 0.1 0.18 -0.9 -0.25 0.21 0.63 0.95 -0.25 -0.42 -0.71 -0.15
0.23 0.57 -1.81 -1.13 -1.63 -1.17 0.2 -0.8 0.36 0.25 0.87 0.98 -0.07 -0.17 -0.87 0.53
0.05 0.74 -0.55 -0.38 -0.88 -0.88 0.22 -0.58 0.43 0.54 0.78 0.66 -0.59 -0.43 -0.37 -0.63
0.12 0.73 -1.89 -1.18 -1.27 -1.28 0.35 -0.87 0.96 0.17 0.39 -0.28 0.32 0.21 -0.44 0.63
0.64 0.37 -0.33 0.03 -0.38 -0.23 0.12 -0.39 0.46 0.3 0.57 0.22 -0.38 -0.84 -1.03 -0.36
0.26 0.89 -3.31 -3.46 -3.89 -5.06 -4.04 -0.53 0.11 0.25 0.15 0.04 1.43 0.71 -0.04 1.13
0.42 0.75 -1.18 -1.21 -0.69 -0.17 0.21 -0.86 0.46 0.49 0.66 0.72 -0.53 -0.51 -0.57 -0.3
0.34 0.58 -1.14 -1.11 -0.51 -0.34 -0.08 -0.75 0.37 0.15 0.26 0.42 0.21 0.03 0.02 0.21
-0.39 0.87 -1.32 -0.96 -0.32 -0.03 0.47 -0.56 0.44 0.24 0.78 0.97 -0.27 -0.93 -1.66 -0.41
0.53 1.08 -1.75 -1.44 -1.62 -1.19 0.06 -0.66 0.56 1.05 0.52 0.83 -0.54 -1.04 -1.64 0.11
0.29 0.7 -0.97 -0.79 -0.75 -0.47 -0.04 -0.6 0.59 0.32 0.37 0.62 -0.37 -0.12 -0.65 0.26
0.25 0.77 -0.51 -0.22 -0.36 0.02 0.46 -0.18 0.74 0.61 0.51 0.24 -1.01 -1.38 -1.74 -0.94
0.13 0.64 -1.86 -2.15 -1.34 -1.59 0.21 -0.95 0.41 -0.03 0.55 0.47 0.47 0.39 0.29 0.45
0.65 0.8 -0.94 -0.55 -0.68 -0.37 0.07 -0.65 0.54 0.05 0.67 0.67 -0.42 -0.66 -0.84 -0.34
0.37 0.74 -0.6 -0.18 -0.5 0.06 -0.07 -1.32 0.33 0.45 0.85 0.76 -0.9 -0.71 -1.02 -0.67
-0.29 1.39 -1.72 -1.77 0.08 -0.6 -0.51 -0.95 0.15 0.43 0.63 0.62 0.33 -0.03 -0.76 -0.6
0.67 0.72 -1.91 -2.62 -0.8 -0.84 0.22 -0.25 0.32 0.1 0.11 0.23 0.09 0.12 0.49 0.09
-0.03 0.52 -1.61 -1.41 -1.07 -0.89 0.14 -0.56 0.58 0.47 0.01 0.18 0.11 0.36 0.42 0.45
-0.29 0.42 -0.84 -0.62 -0.32 -0.28 0.31 -0.33 0.54 0.71 0.6 0.14 -0.11 -0.57 -1.22 0.31
0.3 0.98 -1.01 -0.93 0.03 -0.58 0.08 -0.81 0.18 0.07 0.45 0.34 -0.44 -0.17 -0.29 0.28
0.11 0.82 -0.69 -1.14 -0.47 -0.67 0.28 -0.49 0.53 0.11 0.31 0.43 -0.12 -0.06 -0.0 -0.28
0.84 0.9 -2.18 -1.78 -1.8 -1.56 -0.24 -0.59 0.08 -0.12 0.51 0.93 -0.26 0.18 0.31 0.23
0.98 0.91 -0.75 -0.8 -0.54 -0.4 0.1 0.14 0.55 -0.17 0.14 0.75 -0.92 -0.96 -1.0 -0.57
0.44 0.22 -2.02 -3.35 -4.55 -2.05 -0.28 -0.71 -0.37 -0.14 0.84 -0.01 0.46 0.64 0.71 1.25
-0.25 1.21 -1.41 -1.23 -1.63 -1.08 0.36 -0.31 0.61 0.3 0.92 1.2 -0.6 -0.91 -1.7 -0.5
0.77 0.62 -1.23 -0.7 -0.35 -1.04 -0.22 -1.0 0.33 0.36 0.72 0.61 -0.09 -0.24 -0.89 0.06
-0.28 0.36 -1.28 -1.72 -0.98 -1.14 0.1 -0.54 0.61 0.5 -0.19 0.38 0.28 0.63 0.46 0.28
0.47 0.8 -2.44 -2.07 -2.25 -1.58 0.07 -0.55 0.85 1.2 0.67 0.87 -0.83 -0.75 -0.96 -0.01
0.55 0.53 -0.32 -0.18 -0.35 -0.07 0.05 -0.45 0.24 0.18 0.34 0.13 -0.44 -0.36 -0.58 0.07
-0.28 0.94 -1.76 -1.32 -0.69 -1.06 0.7 -0.39 1.09 0.9 0.8 0.8 -1.41 -1.71 -1.48 -0.89
0.35 0.79 -0.82 -0.65 -0.13 -0.64 0.18 -0.7 0.58 0.58 0.56 0.92 -1.16 -0.7 -0.92 -0.85
0.81 1.09 -1.83 -2.11 -0.61 0.08 -0.56 -1.26 -0.6 0.22 0.6 1.21 -0.24 -0.73 -1.65 0.45
0.21 0.96 -1.31 -1.8 -1.28 -0.45 0.25 -0.48 0.33 -0.05 0.8 0.92 -0.76 -0.45 0.05 -0.09
0.45 1.27 -1.58 -1.03 -0.11 -0.34 0.24 -0.87 0.59 0.62 0.62 0.52 -1.36 -1.44 -1.1 -0.5
0.23 0.31 -0.64 -0.4 -0.98 -0.35 0.02 -1.42 -0.2 0.58 0.67 0.85 0.11 -0.21 -0.47 0.12
0.42 0.77 -1.11 -1.52 -1.03 -0.79 -0.39 -0.85 0.05 0.49 0.57 0.29 0.17 0.25 0.1 0.3
-0.16 1.03 -2.33 -1.96 -1.42 -0.92 0.4 -0.44 0.87 0.82 1.04 0.74 -0.57 -0.63 -0.82 -1.21
0.5 0.8 -0.67 -0.32 -0.65 -0.15 0.01 -0.43 0.8 0.18 0.31 0.26 -0.28 -0.37 -0.81 -0.65
0.26 0.86 -1.68 -1.55 -0.93 -0.9 0.45 0.06 1.03 0.87 0.39 0.62 -0.92 -0.87 -1.01 -0.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.