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Heatmap: Cluster_244 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.38 0.89 -1.82 -1.35 -1.88 -1.97 0.05 -0.68 -0.02 0.43 0.02 0.0 0.32 0.34 0.45 0.82
-0.49 0.79 -1.4 -1.05 -1.17 -1.25 0.31 -0.45 -0.21 0.3 0.68 0.41 0.7 0.39 -1.57 0.63
-0.07 1.15 -5.53 - - -3.95 -2.63 -1.87 -0.09 0.55 -0.99 -4.91 1.22 1.59 0.51 1.37
0.91 1.87 -1.69 -1.83 -0.59 -0.46 0.0 -0.28 -1.76 -1.23 0.16 0.27 -0.08 0.08 -0.76 0.04
-0.68 0.71 -2.17 -1.98 -1.36 -1.07 -1.36 -2.06 -0.33 0.12 -0.91 -0.2 0.82 1.26 1.32 0.87
0.63 1.23 -1.0 -0.12 -0.71 -0.06 0.34 -0.91 0.07 0.7 0.45 0.43 -1.11 -1.12 -1.23 -0.77
-0.1 1.33 -5.14 -5.07 -4.79 -2.76 -2.17 -2.16 -0.88 -1.57 -0.27 -1.43 1.39 1.23 -0.38 2.02
0.53 2.27 -5.14 -2.35 -4.01 -2.47 -1.64 -3.12 1.21 1.27 0.48 -0.53 -2.64 -0.46 -0.25 -1.76
0.98 1.9 -1.16 -1.71 -1.39 -0.48 -0.97 -1.01 -1.64 -2.36 1.16 0.69 -0.43 -1.01 -0.9 0.38
-0.94 0.3 0.87 - - - - - 2.78 1.51 - 1.44 - - - -
-0.11 1.92 -3.15 -5.99 -2.49 -3.35 -3.53 - 1.17 1.2 1.31 0.38 -0.6 -0.29 -0.62 -1.53
- 1.2 - - - - - - 0.26 - - 0.25 - - 3.5 -
1.39 - - - - - - - 2.75 - - 2.74 - - - -
0.01 0.98 -1.07 -0.8 -0.81 -0.86 0.63 -0.23 0.42 0.63 0.54 0.79 -0.84 -0.93 -0.9 -0.38
0.31 1.26 -1.5 -2.43 -0.99 -0.6 -0.16 -0.27 -0.35 -0.5 0.57 -0.4 0.39 0.16 0.64 0.29
0.82 1.91 -0.33 0.04 0.01 -0.25 -0.83 -0.72 -0.07 0.14 0.08 -0.06 -1.26 -1.61 -1.91 -0.88
0.86 1.86 -2.47 -1.89 -2.65 -0.96 0.16 -0.89 0.07 -0.11 0.52 -0.4 0.07 -0.47 -1.25 0.5
0.05 0.63 -0.52 -0.64 -0.25 -0.6 -0.35 -0.68 0.6 0.65 0.01 0.01 0.26 0.12 -0.12 -0.22
0.11 0.77 -1.01 -0.57 -1.04 -1.47 0.34 -0.36 -0.39 0.02 -0.24 0.36 0.6 0.2 -0.11 0.73
0.06 0.72 -1.11 -1.2 -1.02 -0.56 0.01 -1.06 0.56 0.56 0.0 0.03 0.0 0.27 0.55 0.15
0.76 1.48 -0.51 -0.5 -0.62 -0.57 0.42 0.01 -0.16 -0.37 0.18 0.43 -0.82 -1.11 -1.13 -0.26
0.62 1.88 -4.21 -3.88 -2.15 -2.69 -0.14 -0.38 -1.32 -2.0 -0.01 -0.05 0.47 0.61 -0.84 1.34
0.1 1.24 -0.8 -0.7 -0.52 -0.6 -0.17 -0.83 0.2 -0.23 -0.68 -0.63 0.42 0.37 0.08 0.68
0.43 1.12 -0.15 -0.06 0.09 -0.93 -0.33 -0.71 0.67 0.63 0.26 0.27 -0.62 -1.02 -1.39 -0.85
0.59 1.43 -1.08 -1.03 -0.92 -0.95 -0.27 -0.5 0.87 0.38 0.06 0.4 -0.61 -0.51 -0.83 -0.27
1.74 2.87 -1.75 -1.32 -2.41 -1.4 -1.88 -5.09 -0.97 0.16 0.2 -0.37 -3.94 - - -2.48
- - - - - - - - 2.09 - - 1.07 - - - 3.27
0.8 1.44 -1.29 -1.61 -1.06 -0.87 -0.68 -1.62 -0.78 -1.14 -0.45 -0.03 0.68 0.53 0.49 0.71
0.41 1.74 -2.35 -2.02 -2.01 -1.44 -0.97 -1.91 0.23 -0.02 0.53 -0.2 0.18 0.09 0.01 0.87
- - - - - - - -5.21 -3.44 - - -3.45 2.4 1.42 0.79 2.6
-0.89 2.17 -2.27 -2.42 -2.93 -2.36 -0.94 -0.24 1.42 0.56 0.42 1.12 -1.91 -1.65 -1.72 -1.62
-0.01 1.07 -1.14 -1.01 -0.93 -0.66 0.17 -0.29 1.02 0.87 0.42 0.19 -0.82 -0.82 -1.26 -0.05
-0.46 1.18 -1.35 -1.37 -0.87 -0.48 0.11 -0.86 0.53 0.89 0.84 0.35 -0.07 -0.37 -1.15 -0.33
0.27 1.3 -1.41 -0.87 -2.32 -1.24 0.06 -0.17 -0.92 -0.42 0.21 -0.17 0.47 0.43 -0.31 0.99
0.03 1.39 -1.15 -0.9 -0.47 -1.04 0.62 -0.64 0.65 0.65 0.68 0.37 -0.74 -1.18 -1.9 -0.64
0.64 1.11 -1.29 -1.31 -1.82 -1.59 -0.14 -1.11 1.03 0.94 0.49 0.28 -0.76 -0.58 -0.37 -0.21
1.57 1.93 -3.49 -3.28 - - - - -0.14 -0.85 0.09 -1.44 0.98 0.77 - 1.29
2.3 2.95 - - - - - - -0.69 -0.71 0.15 -0.01 - - - -
-0.42 1.98 -2.71 -2.23 -1.41 -1.27 -0.03 -1.64 1.26 1.5 0.42 0.6 -2.16 -2.26 -3.11 -2.06
-0.49 1.02 -3.2 -3.41 -2.03 -2.64 0.47 -0.16 0.05 0.19 0.24 0.37 0.89 0.32 0.03 0.68
0.09 2.3 - - - - - - 1.73 1.78 - 1.72 - - - -
-0.42 2.12 - - - - -1.2 -1.22 2.08 - 0.17 1.07 1.37 - - -
0.58 1.21 -1.34 -0.48 -0.61 -0.71 0.08 -0.09 -0.04 0.23 -0.15 -0.16 -0.34 -0.11 -0.23 0.38
-0.15 1.04 -0.67 -0.74 -0.42 -0.47 0.4 0.07 0.77 0.57 0.04 0.54 -0.64 -0.98 -1.03 -0.6
0.69 2.17 -4.01 - -3.88 - -3.68 -3.66 -0.11 -0.56 -0.17 -1.44 0.91 0.63 0.47 0.96
- 0.35 - - - - - -1.77 1.46 - - 0.45 1.8 - 2.77 -
0.78 2.14 -1.49 -1.44 -0.97 -0.71 -0.85 -0.93 -0.39 -0.43 0.62 0.56 -0.67 -0.81 -0.81 -0.59
0.49 1.65 -3.05 -2.08 -1.77 -0.62 -1.04 -1.5 0.82 0.88 -0.17 -0.86 0.9 -0.41 -1.34 0.32
0.3 1.14 -0.59 -0.82 0.07 -0.66 0.27 -0.55 0.78 0.82 0.29 0.54 -1.36 -1.91 -1.49 -0.77
0.62 1.65 -1.55 -1.74 -1.25 -1.47 -0.32 -0.58 1.04 0.99 0.53 0.4 -1.35 -1.74 -1.42 -0.83
0.4 1.11 -1.26 -2.04 -1.56 -1.1 -0.37 0.12 -0.13 -0.21 0.16 -0.38 0.05 -0.04 1.12 0.45
-0.18 1.8 -2.95 -3.0 -2.69 -2.14 -1.06 -0.3 1.17 1.1 -0.72 -0.83 0.2 -0.31 -0.6 0.6
0.36 1.27 -2.16 -2.13 -1.44 -2.03 -0.72 -1.17 -2.01 -0.95 0.23 -0.74 0.84 0.94 0.9 1.05
- - - - - - - - 3.15 0.88 - 2.4 - - - -
- - - - - - - - -2.45 - - -2.45 2.34 2.03 1.44 1.92
0.59 1.21 -1.13 -1.62 -1.01 -0.77 0.51 -0.41 0.76 0.06 -0.25 -0.06 -0.32 0.12 -0.4 -0.07
0.25 1.19 -1.75 -1.34 -1.71 -0.91 0.21 -0.4 1.04 1.17 0.23 0.31 -0.88 -0.83 -1.05 -0.36
-0.06 0.35 -0.25 -1.1 -0.68 -0.57 -0.39 -0.0 0.36 0.48 -0.54 0.07 0.18 -0.19 0.62 0.52
-0.28 0.86 -1.67 -1.27 -1.74 -1.31 -0.15 -0.39 0.04 0.16 -0.25 0.12 0.34 0.53 0.18 1.23
0.31 1.12 -0.62 -0.46 -0.85 -0.77 0.62 -0.42 0.45 0.78 0.5 0.29 -0.76 -1.08 -2.67 -0.25
-0.58 2.05 -7.02 -6.04 -4.68 -5.89 -1.44 -0.07 1.7 1.46 0.73 0.45 -2.1 -2.31 -5.73 -1.7
0.7 1.61 -1.75 -1.48 -0.89 -0.53 0.26 -0.19 0.8 0.5 -0.15 -0.27 -0.41 -1.02 -1.65 -0.13
0.2 1.51 -1.71 -2.39 -1.46 -0.76 -1.03 -0.39 1.13 0.6 0.01 -1.28 0.31 0.11 -1.49 0.6
0.57 1.84 -1.74 -1.69 -1.05 -0.88 0.18 -0.58 -0.52 -0.9 0.35 -0.11 0.06 -0.07 -0.04 0.14
0.43 1.29 - - - - -1.38 - - - 0.09 - 1.3 1.79 2.28 -
0.45 2.06 -4.02 -4.45 -2.37 -2.91 -1.31 -0.87 1.57 1.28 0.71 -0.01 -1.75 -2.91 -2.91 -1.01
0.22 1.4 -1.11 -1.25 -1.28 -0.75 -0.51 -0.94 0.84 0.34 -0.44 -0.39 -0.03 0.1 -0.13 0.65
0.5 1.32 -1.07 -0.53 -1.16 -0.48 -0.01 -0.72 0.36 1.13 0.46 -0.15 -0.82 -1.12 -1.45 0.03
0.15 0.54 -1.01 -0.4 -0.59 -0.06 0.15 -0.05 0.66 0.56 0.17 0.06 -0.27 -0.35 -1.16 0.26
0.55 2.28 -5.83 -4.49 -4.7 -4.28 -0.8 -1.55 0.92 1.68 0.57 0.57 -2.91 -2.69 -2.94 -3.04
0.37 1.24 -2.53 -2.65 -2.16 -1.32 0.31 -0.38 -0.02 0.43 -0.51 -0.42 0.58 0.72 -0.06 0.59
1.8 3.24 - - - - - - 1.6 -6.0 - - - - - -
0.12 1.06 -0.56 -0.43 -0.14 -0.69 0.13 -0.23 0.27 0.45 0.14 -0.16 -0.43 -0.51 -0.03 -0.09
0.32 1.05 -0.74 -0.33 -0.49 -0.21 0.39 -0.5 0.74 0.47 0.56 -0.01 -0.77 -1.28 -1.69 -0.22
0.14 1.77 0.11 -0.24 -0.74 -0.12 -0.77 -0.31 1.33 -0.87 0.52 0.48 -1.91 -2.6 -4.25 -1.89
0.8 1.79 -0.89 -0.34 -0.66 -0.31 -0.17 -0.92 0.27 -0.01 -0.05 0.21 -0.63 -1.12 -0.93 -0.6
0.88 1.94 -3.91 -2.99 -1.6 -0.42 0.59 -0.64 -2.02 -0.58 0.22 -0.65 -0.19 -0.39 0.79 -0.31
0.27 1.38 -3.09 -2.53 -1.64 -1.75 -0.51 -1.56 0.18 0.26 0.59 -0.17 0.44 0.16 0.53 0.67
-0.56 1.26 -0.31 -0.58 -0.24 -0.62 -1.62 -0.86 1.13 -0.62 0.12 0.86 -0.59 -0.88 -1.39 0.8
0.81 2.04 -2.44 -1.4 -1.78 -1.41 0.03 -0.27 0.93 0.75 0.35 0.26 -2.08 -2.04 -2.31 -1.7
-1.07 2.49 - - - - -1.23 - 1.73 0.41 0.71 -0.4 - 0.26 0.33 -
0.56 1.91 -4.55 -4.8 -1.57 -1.85 -0.87 0.43 -0.0 0.63 -0.22 -0.66 0.48 -0.23 -0.66 0.35
-1.28 0.65 -1.34 -1.83 -2.89 -1.46 -2.11 -1.02 1.57 -0.44 -0.75 0.94 1.03 1.14 -0.87 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.