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Heatmap: Cluster_299 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.83 0.41 0.19 0.73 -0.9 -0.3 0.63 -0.66 0.14 0.2 0.76 0.62 -0.84 -0.91 -0.98 -0.51
-5.47 -4.64 0.92 1.1 0.99 1.3 1.68 0.51 -2.29 -6.03 -0.61 0.2 -1.3 -3.27 -3.78 -2.29
-1.07 -0.25 -0.12 0.43 -0.12 0.39 0.2 -0.39 -0.81 -0.31 0.04 0.3 0.5 0.25 -0.28 0.28
-1.45 -2.02 0.77 0.94 0.5 0.39 0.85 -0.62 -0.4 -0.47 0.78 0.01 -0.56 -0.94 -1.85 -0.15
-3.42 -3.66 1.46 1.51 0.11 1.92 0.88 -0.53 -2.52 -2.52 0.24 0.02 -3.51 -6.93 - -2.37
-0.65 -1.69 0.33 1.02 -0.09 0.43 0.95 -0.11 -0.32 -0.22 0.83 0.5 -1.03 -1.0 -1.57 -1.16
- 0.77 0.74 1.07 - - - -1.92 - - - 0.3 - - 2.62 1.52
-0.78 -0.74 0.72 0.79 0.49 0.66 1.1 -0.51 0.18 0.57 -0.05 0.23 -2.12 -2.51 -2.3 -2.0
-0.33 0.08 0.24 0.64 0.28 0.32 0.43 -0.38 -0.62 -0.1 0.29 0.64 -0.74 -0.91 -0.49 -0.67
-0.26 -1.22 1.21 1.61 0.15 1.31 1.54 0.24 -1.66 -0.97 -1.26 -1.46 -6.12 -6.9 -7.42 -4.33
-1.62 -1.05 1.18 0.89 0.46 1.07 1.1 0.44 -1.06 -0.65 -0.21 0.05 -1.24 -4.07 -2.0 -1.52
-0.13 0.53 0.52 0.43 0.1 0.36 0.38 -0.25 -1.02 -1.8 -1.13 -0.8 0.42 -0.33 -0.75 0.86
-0.7 0.59 1.0 1.11 0.64 0.18 0.95 -0.3 -0.02 -0.61 -0.05 -1.2 -1.67 -1.94 -2.95 -0.89
-1.49 -0.85 0.38 0.02 0.01 0.14 0.35 -0.69 -0.49 -0.9 -0.08 0.09 0.34 0.47 0.49 0.55
-3.44 - -0.47 -0.14 -2.08 -0.5 -1.6 -1.77 -2.33 -2.83 -1.75 -2.46 1.9 1.84 -0.85 2.01
-6.6 1.1 1.13 1.63 0.65 1.41 -0.3 -2.94 -1.06 -2.03 0.32 0.48 - - -5.66 -7.34
-2.24 -2.94 1.21 1.68 0.89 0.79 1.18 -1.61 -2.34 -1.71 0.77 -0.02 -1.8 -1.85 -4.31 -2.65
-2.37 -3.53 1.46 0.82 0.35 1.23 0.66 0.26 -3.04 -3.57 -0.44 0.36 0.22 -0.84 -3.9 -0.35
-0.24 0.71 0.06 0.4 0.18 0.06 0.35 -0.67 0.11 -0.17 0.37 0.41 -0.98 -0.87 -0.69 -0.3
- - 0.97 1.59 0.29 1.53 2.05 -0.76 -0.65 -2.18 -0.55 -0.66 - - - -
-0.88 0.65 0.48 0.55 -0.19 0.67 0.81 -0.29 -0.33 -0.49 0.55 0.23 -0.9 -1.47 -1.92 -0.55
-2.49 1.25 0.81 0.78 0.32 -0.85 -0.13 0.76 -1.83 -0.58 0.5 1.22 -2.14 -2.87 -3.33 -1.35
-2.83 -2.98 0.52 1.18 1.21 0.87 1.18 -1.01 -0.66 -1.45 1.03 0.28 -2.2 -1.76 -4.14 -1.7
-5.99 1.45 1.24 1.27 1.08 0.68 1.33 -3.13 -3.92 -7.07 0.29 -0.58 -4.51 -4.94 -5.3 -4.02
-1.25 0.16 -0.31 -0.07 -0.07 -1.15 -0.91 -0.38 -1.63 -1.9 0.04 -0.54 0.84 1.19 0.93 0.78
-1.5 -4.42 1.51 1.79 0.09 1.19 2.04 -0.66 - - -0.85 -0.95 -2.94 - - -
-7.92 1.22 -0.99 0.4 -0.54 -0.08 1.18 1.2 0.14 -0.07 0.4 1.17 -8.99 -7.92 -8.02 -6.65
-1.22 0.75 0.79 0.2 0.54 0.85 1.1 -0.69 -0.46 -0.79 -0.3 -0.22 -0.2 -0.6 -1.93 -2.02
-1.34 -0.29 0.32 0.95 0.87 0.06 0.59 -0.18 -0.11 0.37 -0.49 -0.64 -0.24 -0.48 -1.65 -0.15
-1.49 1.35 -0.26 - -0.55 - - 1.2 -0.11 - -0.01 1.47 - - 2.2 -
-2.54 -0.23 0.75 1.0 -0.1 0.67 1.15 -2.29 -1.09 -1.71 1.19 0.85 -1.6 -1.38 -1.44 -1.27
-3.16 -0.24 0.31 -0.58 -0.86 -0.19 -1.27 -0.64 -5.81 -3.75 -3.55 -2.54 1.39 1.27 0.93 1.75
-0.25 -0.21 0.28 0.83 0.32 0.33 0.2 -0.31 -0.13 -0.63 0.63 0.71 -0.59 -1.15 -1.24 -0.81
-0.88 0.62 0.42 0.85 -0.06 0.83 -0.83 -1.36 -0.19 -0.69 0.63 0.47 -0.04 -0.9 -2.03 -0.13
- 0.68 1.01 1.13 1.46 1.04 2.09 -4.1 - - -2.61 -0.14 - - - -
-1.64 -0.73 1.04 1.49 0.55 0.75 0.72 -0.73 -2.05 -2.05 1.32 0.14 -1.84 -2.6 -3.06 -2.6
-1.24 0.5 0.68 1.21 0.51 1.01 1.26 -1.76 -1.15 -2.58 0.36 0.16 -1.62 -1.91 -1.48 -2.75
-0.5 -0.04 0.7 0.78 0.65 0.62 1.05 -2.38 0.02 -0.45 0.03 0.64 -1.95 -1.95 -1.73 -1.1
-0.91 0.91 0.71 -0.31 0.29 0.16 0.06 -0.98 -0.7 -0.91 -0.02 0.56 -1.01 -0.02 -2.04 0.95
-0.85 -1.66 1.11 1.16 1.11 0.82 1.36 -1.12 -2.86 -2.42 0.68 0.25 -2.04 -2.77 -3.87 -2.38
0.15 -4.1 1.82 1.29 0.82 1.64 -0.65 0.2 -4.81 - -3.71 -2.36 -3.46 -0.91 -1.17 -0.34
-1.84 -2.21 1.09 1.4 -0.18 1.27 1.56 -1.59 -6.48 -4.49 -1.05 -1.36 -0.62 -0.14 0.61 -2.71
-1.22 -0.8 0.63 1.22 0.66 0.35 1.02 -1.28 -0.16 -0.89 0.28 0.27 -0.69 -1.38 -1.39 -0.78
-0.69 -1.65 0.23 0.66 0.04 0.29 0.82 0.09 -0.88 -0.85 0.19 0.51 0.12 -0.61 -0.47 0.14
-2.37 -0.99 0.45 0.83 0.38 0.91 0.52 -1.25 -2.03 -2.63 0.56 0.76 -0.26 0.37 -1.33 0.04
-4.87 -2.63 0.75 1.78 0.51 1.34 0.46 0.24 -2.04 -2.02 1.18 0.26 -5.4 -5.91 -3.84 -3.0
0.07 0.37 0.57 0.79 0.53 -0.25 0.36 -0.76 0.19 0.24 0.29 0.83 -1.98 -2.65 -1.72 -2.07
-0.88 0.92 0.56 0.07 -0.77 -0.43 0.76 -1.54 -0.24 -0.38 0.03 0.71 -0.28 -0.5 -0.76 0.36
-3.05 -1.85 0.86 1.44 0.61 0.94 1.19 -0.53 -1.3 -1.59 0.91 0.45 -2.4 -4.56 -5.34 -1.29
-1.61 0.72 1.05 1.68 0.46 1.07 0.58 -1.44 -2.78 -4.21 0.22 0.03 -5.23 -1.08 -1.67 -2.19
-3.07 -0.1 1.49 1.25 0.4 1.96 0.06 -3.6 -3.43 -3.96 0.78 0.62 - -4.77 - -
-0.85 0.52 -0.85 -0.92 -0.83 -1.08 0.22 -0.33 -0.53 -0.57 -0.1 0.18 0.61 0.7 0.79 0.71
- -3.89 0.92 1.83 0.71 0.36 0.98 -3.1 -0.22 -1.2 1.2 0.9 - - - -
-2.48 -2.04 0.27 0.79 0.33 0.41 1.19 -0.51 -2.52 -1.82 0.39 -0.21 0.29 -0.17 0.03 0.39
-4.0 - 0.06 -0.35 -0.71 -0.41 0.02 -1.16 -5.43 -4.79 0.09 -0.49 1.53 1.15 0.79 1.38
-0.26 1.46 0.42 0.79 0.55 0.64 0.82 -0.35 -2.53 -3.23 -2.26 -2.18 -0.48 -0.47 -0.25 -0.35
-4.31 -2.92 1.51 1.76 -0.09 1.55 1.4 -2.09 -8.16 -9.1 0.98 -0.54 -4.23 -4.27 -6.84 -3.77
-3.71 - 2.04 1.5 0.95 1.32 -0.03 0.67 -3.6 - -2.51 -0.81 -1.7 - -2.31 -0.6
-2.32 -2.89 1.23 1.31 -0.07 1.69 1.15 -2.48 -2.69 -1.42 1.23 0.47 - - -10.26 -
-3.03 -1.97 0.65 1.57 0.9 0.53 1.47 -0.77 -0.49 -0.31 0.62 -0.45 -2.45 -2.51 -3.8 -2.44
-6.7 1.47 1.33 1.51 -0.95 0.78 -2.95 -3.01 -0.12 -2.98 1.43 0.68 -6.82 - -6.94 -
-0.54 -2.14 1.12 0.92 0.48 0.73 1.52 0.69 -5.05 -5.74 0.64 0.62 -4.26 -2.61 -6.1 -3.29
-2.03 -3.02 1.04 0.92 -0.29 1.55 1.13 -3.5 - - 0.0 1.03 0.49 -3.19 - 0.11
-0.45 0.62 -0.13 -0.08 -0.43 -0.27 0.3 -0.02 -0.1 -0.58 0.3 0.47 -0.06 0.04 -0.23 0.01
-1.07 0.47 0.02 0.41 -0.98 -0.73 -1.23 -0.33 -0.88 -1.66 -0.51 0.33 0.73 0.41 0.98 0.74
-5.55 0.87 0.63 0.22 0.82 0.46 0.97 -1.46 0.83 -0.49 0.92 0.55 -4.11 -4.98 -7.3 -5.08
-2.82 1.35 0.57 1.19 0.76 0.9 0.66 -0.8 -1.56 -1.31 -0.02 -0.15 -1.34 -2.22 -2.79 -1.15
- - 1.28 1.64 1.77 0.03 2.17 -1.04 - - - - - - -0.89 -0.99
-3.9 - 0.04 -0.09 -1.31 -0.33 -0.79 -1.42 - - - -3.43 1.79 1.18 2.03 0.93
-0.1 0.51 -0.04 0.07 -0.38 -0.16 0.04 -0.44 0.01 -0.64 -0.0 0.03 0.21 0.13 -0.18 0.47
-1.69 0.52 0.07 0.98 0.89 0.86 -0.2 -1.33 -0.52 0.52 0.22 0.69 -1.43 -1.7 -1.5 -1.54
-1.38 -0.88 -1.02 0.59 -1.39 0.39 1.11 -2.7 - - -2.14 -0.25 0.4 0.3 1.05 1.76
-6.24 -5.18 0.61 1.08 -0.55 1.01 1.35 -4.85 -3.29 -3.5 1.22 -0.02 0.27 -0.0 -0.86 -0.34
-0.74 0.34 -0.0 0.32 -0.32 -0.06 0.38 -0.49 -0.18 -0.05 0.54 0.48 -0.21 -0.62 -0.68 0.35
-0.6 -1.31 0.36 1.01 -0.02 0.56 1.43 -0.89 -0.49 -1.39 -0.36 -1.62 0.26 -0.27 -0.96 0.26
-0.55 -0.88 -0.0 0.32 -0.31 0.19 0.62 0.03 -0.39 -0.52 0.22 0.05 0.17 -0.11 -0.13 0.47
- - 1.34 1.96 1.26 0.2 1.36 -4.95 0.38 -2.56 -0.52 -1.04 -1.35 - - -1.47
- - 0.55 2.64 0.79 1.41 1.96 -4.25 - - - - - - - -
-0.18 0.86 0.73 0.28 0.49 -0.59 0.38 0.53 -1.26 -0.86 -0.05 0.26 -1.27 -0.71 -0.89 -0.13
-1.58 -0.15 1.04 1.12 0.25 0.57 1.08 -0.96 -0.04 -0.52 0.88 0.69 -4.75 -4.84 -5.36 -5.62
-2.28 0.91 -1.69 -0.23 -1.44 -0.66 0.47 0.53 0.13 -0.28 0.27 0.65 0.45 -0.4 -0.33 0.38
-0.85 -0.83 0.16 0.71 0.18 0.33 0.59 -0.11 -0.83 -0.93 0.6 -0.62 0.18 0.0 -0.25 0.13
-3.67 -0.87 0.62 1.59 1.4 0.81 0.89 -2.7 0.87 0.72 -0.81 -1.4 - - - -
-2.88 - -0.67 -0.53 -0.84 -0.26 -0.52 -2.43 -2.49 -2.33 -0.53 -1.5 1.18 2.06 1.07 1.19
-4.75 -4.06 1.6 2.12 -0.67 1.52 1.82 -2.56 -3.98 -3.66 -1.45 -1.75 -3.22 -2.29 -3.29 -3.13
-0.91 -0.39 0.55 1.32 0.94 1.22 1.87 -3.07 - - -0.64 -0.18 -2.79 -1.88 -0.49 -3.91
- 1.4 1.34 2.36 -0.28 1.46 0.34 -3.68 - - - -0.38 - - - -
-3.3 -1.46 0.72 1.06 0.69 0.72 1.3 -0.38 0.16 0.7 -0.97 -0.46 -1.62 -1.71 -1.64 -1.42
-0.37 -0.43 0.09 0.56 0.57 0.41 -0.07 -1.15 0.26 -0.15 0.25 0.61 -0.37 -0.33 -1.0 -0.22
-2.38 0.6 0.96 1.32 0.76 1.69 0.64 -2.09 -3.25 -2.42 0.22 0.27 -4.61 -4.38 -1.93 -3.03
-0.91 0.66 0.86 1.19 1.06 0.67 1.18 -1.2 -1.83 -1.77 -1.61 -2.39 -0.61 -0.94 -1.15 -0.54
-0.74 -0.61 0.77 1.28 0.04 0.49 0.37 -0.65 -0.39 -0.8 0.83 0.54 -1.08 -1.14 -1.73 -1.12
-0.69 0.76 0.62 0.95 0.31 0.44 -0.38 -1.44 -0.67 0.14 0.43 0.64 -1.57 -1.3 -1.07 -0.68
-0.43 -0.5 0.62 0.99 0.01 0.7 0.37 -1.02 -1.06 -0.44 0.43 0.06 -0.49 -0.68 -0.54 -0.03
-2.17 -0.25 0.69 1.01 -0.59 1.1 1.23 0.07 -1.0 -0.94 0.85 0.92 -2.79 -4.35 -7.4 -2.46
-0.69 -0.82 0.64 0.91 0.47 0.79 0.79 -0.62 0.01 -0.19 0.38 0.02 -1.26 -1.64 -1.72 -0.68

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.