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Heatmap: Cluster_179 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-4.14 -4.77 -0.03 -0.45 0.86 0.05 -0.26 0.07 -0.3 -0.69 1.7 1.71 -3.84 -0.1 -2.55 -1.63
-0.33 0.13 -0.23 -0.23 0.03 0.26 0.27 -0.39 0.26 -0.12 0.62 0.97 -0.66 -0.56 -0.59 -0.69
-0.21 -0.31 -0.99 -0.75 -1.25 0.42 -0.22 -0.39 0.72 0.17 1.14 0.84 -0.3 -0.62 -0.85 0.12
-1.14 -2.07 -0.15 -0.02 -0.12 -0.14 0.21 -0.54 0.68 -0.23 0.96 0.44 0.52 -0.11 -1.07 0.21
-1.5 -1.37 -0.62 -1.33 -0.31 -0.14 0.27 -1.26 -1.12 -0.82 0.06 0.32 1.02 1.15 0.66 0.8
- - -0.48 0.29 -0.84 0.92 0.65 -2.08 0.98 0.24 1.9 1.55 - - - -
- -4.59 -0.05 -0.02 0.04 0.27 0.9 -0.53 0.69 -0.61 1.48 1.51 -0.81 -1.23 - -1.67
- - - - - - - -2.88 - -2.02 - -0.07 2.9 0.42 0.17 2.24
-1.46 -1.16 -0.94 -0.22 -0.03 0.14 0.4 0.32 0.72 0.23 1.2 0.83 -0.81 -1.15 -1.26 -0.26
- -5.23 0.07 0.09 0.24 -0.07 -2.66 -2.4 1.16 -0.01 2.1 1.95 - - - -
- -8.12 0.2 0.27 1.14 0.18 0.9 -1.48 0.44 0.28 1.34 1.57 - - - -
- - -0.76 -1.1 -0.31 1.13 -1.82 -3.55 0.63 0.47 1.82 2.36 - - - -
-1.38 -0.56 0.33 0.35 0.98 0.57 0.52 -1.25 0.24 0.23 0.75 0.95 -1.78 -1.59 -2.98 -1.38
-1.92 -1.92 -0.59 -0.37 -0.35 -0.2 0.27 -0.18 0.07 -0.33 1.16 0.85 0.43 0.16 -0.34 0.19
- - - - 0.71 0.58 0.93 - 0.64 -0.31 0.73 2.79 - - - -
-1.38 0.32 0.26 0.3 0.91 -0.33 0.7 -0.63 0.16 0.11 0.62 0.9 -1.19 -1.36 -2.04 -1.64
-0.75 -1.13 -0.38 -0.06 -0.16 -0.14 0.61 -0.24 0.09 -0.16 0.95 0.69 0.23 -0.32 -0.89 0.04
- - 0.7 - - 0.66 - -0.95 - 1.33 1.36 2.84 - - - -
-3.28 0.35 -0.17 0.8 1.67 0.38 0.26 -2.89 0.46 -0.06 0.49 1.27 -6.05 - -5.08 -
0.52 - 1.21 - 0.53 -1.62 - - - - - 3.39 - - - -
- - 0.27 -0.86 -0.89 0.57 -3.44 -0.36 0.29 0.13 1.57 1.22 0.43 0.02 -1.1 -0.14
-2.03 -2.01 -1.98 -1.02 -1.25 1.33 -1.14 -2.63 0.59 0.76 1.97 1.44 -2.19 -1.53 -0.94 -1.72
-0.47 -1.02 -0.25 0.08 -0.37 0.49 0.14 -0.06 0.94 0.27 0.94 0.49 -0.17 -1.51 -1.92 -0.51
-5.47 -3.32 0.62 -0.23 0.64 1.12 0.78 0.09 0.21 0.25 1.06 1.3 - -4.84 - -4.87
- -5.71 -0.34 -0.78 1.01 0.62 -6.79 -2.63 -1.95 1.24 1.56 2.34 - - -2.24 -4.33
-3.87 -6.09 -2.41 -1.57 -0.85 -0.22 0.14 -0.5 0.53 -0.68 0.78 0.17 1.25 1.02 -0.03 0.9
-0.63 -0.57 -0.27 -0.21 0.06 0.2 0.18 -0.19 0.39 -0.0 0.75 0.48 0.02 -0.58 -0.71 0.15
-0.45 -0.31 -0.26 0.17 -0.04 0.48 0.32 -0.54 0.39 0.36 0.53 0.95 -1.07 -0.97 -0.87 -0.51
-2.42 -1.93 -0.01 0.1 0.14 0.36 -0.38 -0.93 0.26 0.38 1.17 1.26 -0.3 -0.66 -1.11 -0.42
-2.97 - -2.13 -1.79 0.8 0.43 1.01 -1.34 0.46 - 2.01 1.45 0.78 - - -
-3.12 -0.18 0.68 0.03 0.01 0.54 -1.23 -1.23 0.01 -0.27 0.13 0.02 -0.22 1.38 -0.73 0.06
-0.51 -1.13 0.28 0.38 0.17 0.18 -0.05 -1.05 -0.06 -0.19 0.74 1.1 -0.14 -0.87 -1.3 0.16
-1.76 -0.52 0.1 0.0 0.16 -0.08 -0.21 -0.9 -0.1 0.45 1.39 1.51 -1.21 -1.1 -1.35 -1.29
- -7.28 -0.13 -0.53 0.87 1.08 0.93 -1.48 -0.34 0.63 1.3 1.69 -4.83 -3.12 - -
-1.8 0.47 -0.61 -0.37 0.38 0.1 0.48 -1.22 0.18 0.63 1.2 1.86 -5.8 -4.97 -5.56 -5.66
- - - - - - - - - - 1.91 3.61 - - - -
- - -2.21 -1.29 -2.48 -1.25 -3.88 -2.76 -2.07 -1.0 0.35 0.66 1.3 1.26 2.15 0.76
-2.03 -3.0 -0.51 -0.34 -0.36 -0.16 0.27 0.12 -0.41 -0.05 0.75 0.49 1.09 0.28 -0.22 0.21
-1.56 -0.64 -0.57 -0.58 -0.31 -0.11 -0.03 -0.74 0.2 -0.06 0.58 0.83 0.56 0.04 -0.19 0.69
-2.03 -5.51 -0.66 -0.77 1.31 0.46 -4.09 -4.32 0.62 0.06 1.75 2.2 - -5.77 - -
-2.71 0.06 0.75 0.64 0.49 0.59 0.05 -0.19 0.33 0.25 0.77 0.46 -1.21 -2.66 -3.91 -0.85
- - -0.88 - -0.75 - - -3.53 - - 2.59 3.13 - - - -
- -1.62 -1.09 -2.35 1.04 1.09 1.46 -5.33 - 0.54 0.99 1.79 - - 0.21 -
-1.15 -1.55 -0.64 -0.51 -0.37 0.38 0.61 0.08 0.44 -0.13 1.06 0.87 -0.26 -0.85 -0.74 0.05
-0.29 -1.36 0.24 0.55 0.21 0.28 -0.09 -0.62 -0.05 0.01 0.78 0.93 -0.27 -0.74 -0.9 -0.68
-0.6 -0.83 -0.27 0.12 -0.08 -0.09 0.47 -0.11 0.02 -0.16 0.81 0.81 -0.01 -0.3 -0.62 -0.33
-0.5 0.19 0.24 0.49 0.44 0.4 0.11 -0.34 -0.01 0.16 0.11 0.31 -0.6 -0.63 -1.01 -0.34
- - 1.15 -1.07 0.62 -1.9 -4.05 -0.88 -2.45 1.46 1.72 2.22 - - - -
-1.24 -0.79 -0.74 -0.08 -0.64 0.56 0.3 -0.72 0.64 0.38 1.32 0.68 -0.16 -0.88 -1.65 -0.37
-1.42 -1.92 -0.85 -0.16 0.07 0.25 -0.19 -0.78 0.13 0.07 0.78 1.2 0.11 -0.33 -0.55 0.58
-1.07 -1.17 -0.26 0.1 -0.34 -0.01 0.63 0.15 0.44 0.23 1.23 0.7 -0.35 -1.5 -0.87 -0.87
-0.56 -0.59 -0.3 0.14 -0.02 0.26 0.2 0.07 0.89 0.22 0.87 0.46 -0.56 -0.98 -1.7 -0.63
-1.76 -1.35 0.1 0.01 0.14 0.58 -0.62 -0.13 0.28 0.42 1.42 1.2 -1.28 -1.63 -1.09 -1.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.