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Heatmap: Cluster_117 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.47 0.74 -0.92 -0.87 -0.37 -0.11 -0.04 -2.72 -0.08 -0.76 0.2 0.07 0.28 -0.14 -0.84 0.31
1.09 -0.89 -0.77 -0.64 -0.9 -0.37 0.34 -0.27 -0.04 0.16 0.14 -0.99 0.52 0.38 -0.33 0.55
0.16 -1.95 -1.73 -2.6 -2.65 -1.79 -2.43 -1.32 -2.59 -1.14 -2.74 -2.19 1.44 1.49 1.2 2.11
1.2 -1.95 -0.99 -0.84 -0.73 0.19 0.46 -0.23 -0.09 -0.12 0.4 -0.68 0.4 0.2 -0.27 0.39
0.56 -0.4 -0.49 -0.66 -0.39 -0.39 -0.01 -0.72 -0.62 -0.58 -0.38 -0.44 0.52 0.68 0.99 0.53
0.79 -1.2 -1.33 -1.88 -0.92 0.1 -0.56 -1.77 -1.0 0.15 -0.55 -0.7 0.77 1.0 1.04 0.95
1.18 0.37 -1.36 -1.83 -0.98 -0.24 -0.54 -0.74 -1.75 -0.72 -0.25 -0.47 0.98 0.6 0.08 1.09
2.22 -0.27 -1.21 -1.94 -0.8 -0.82 -4.61 -1.01 0.55 0.21 -1.16 -0.7 0.45 -0.14 -0.14 0.36
2.76 - - -0.09 -0.34 - -0.13 -1.15 - 1.24 - - - 0.36 - 1.33
2.39 - - - - - -0.05 - - 0.26 - - 1.53 - 2.51 -
0.88 -0.81 -0.86 -1.01 -0.97 0.17 0.47 -0.15 -0.32 -0.34 0.14 -0.89 0.68 0.24 -0.16 0.78
0.65 -0.37 -1.11 -1.56 -0.58 -0.39 -0.58 -0.83 -0.76 -0.11 -0.4 -0.63 0.99 0.87 0.69 0.87
2.15 -0.03 - - -0.0 0.25 0.6 -0.29 -0.4 -0.12 0.78 0.54 -1.49 -1.0 -1.97 -3.07
2.0 -0.43 -1.35 -0.93 -1.33 -0.42 -1.4 -0.79 0.29 1.1 0.85 -0.16 -0.94 -0.9 -1.16 -0.58
0.81 -1.35 -1.31 -1.5 -1.09 -0.52 -0.7 -0.86 -1.24 -0.55 -1.99 -2.23 1.3 1.02 0.78 1.57
1.12 -1.15 -1.14 -1.69 -0.64 -0.2 0.33 -0.29 -1.19 -0.16 0.19 -1.11 0.64 0.58 0.42 0.77
1.16 0.05 -1.01 -1.35 -0.92 -0.6 -0.46 -0.89 -0.48 0.05 -0.55 -0.83 0.79 0.63 0.48 0.79
0.71 -1.65 -1.78 -3.28 -1.29 -1.74 -0.9 -0.62 -1.43 -0.04 -0.65 -1.22 1.36 1.17 0.88 1.43
1.08 -0.2 -0.83 -1.03 -0.53 -0.12 -0.44 -0.43 -0.18 -0.04 0.25 -0.8 0.75 0.14 -0.42 0.78
0.75 -1.05 -0.59 -1.0 -0.35 -0.18 0.1 -0.5 -0.37 -0.23 0.2 -0.43 0.56 0.46 0.56 0.48
1.53 -2.12 -0.8 -1.02 -0.77 -0.63 0.37 -0.15 -0.18 0.05 0.2 -0.16 0.42 0.44 -0.22 -0.19
1.72 0.07 -1.19 -1.04 -0.53 -0.2 -0.83 -0.72 0.48 0.44 -0.53 -1.02 0.41 -0.17 -0.88 0.39
3.4 - - - - - - - - 2.43 - - - - - -
1.28 0.08 -0.34 -0.75 -0.73 -0.01 -0.71 -1.18 -0.43 -0.16 -0.36 -0.51 0.47 0.33 0.47 0.42
1.2 -0.07 -0.54 -1.01 -0.26 0.15 0.14 -0.2 -0.16 -0.01 0.36 -0.04 -0.24 -0.26 -0.36 0.09
1.15 -0.24 -2.18 -1.7 -0.88 -0.0 0.07 -1.15 -0.27 0.16 -0.26 -1.3 0.99 0.91 -0.34 0.61
2.35 -0.17 -1.5 -1.11 -1.61 0.5 -2.73 -4.08 -0.4 0.9 -4.07 -3.63 0.67 -0.5 -0.51 0.54
2.38 1.01 - - - - - - - 1.41 - - - - 2.61 -
1.04 -1.11 -1.61 -1.44 -2.07 -1.89 -1.72 -1.47 -1.61 0.11 -0.83 -0.7 1.05 1.35 1.16 1.12
0.93 0.33 -1.65 -2.36 -0.99 -0.65 -0.76 -1.6 -1.58 -0.93 -0.47 -0.58 0.84 0.97 1.18 0.98
1.03 -0.47 -1.87 -1.54 -0.91 -0.51 -1.44 -1.98 -0.35 -0.04 -0.62 -0.76 1.0 1.15 0.93 0.71
1.24 -1.69 - - -3.06 - -1.22 -0.7 - -0.08 -0.4 - 1.42 1.76 1.5 0.65
1.1 -0.87 -2.2 -2.68 -0.62 -0.23 -0.71 -0.63 -0.56 -0.46 -0.72 -0.85 1.18 0.71 -0.08 1.46
1.12 -0.79 -0.79 -0.57 -0.72 -0.02 0.47 -0.56 -0.12 0.25 0.26 -0.74 0.35 0.13 0.06 0.01
0.46 -1.56 -1.87 -2.22 -1.59 -0.72 -0.5 -0.63 -1.12 -1.09 -0.28 -1.57 1.79 1.11 0.38 1.32
3.56 - - - - - - - - 2.06 - - - - - -
0.81 0.1 -0.79 -1.16 -0.8 -0.33 -0.28 -1.16 -0.61 -0.41 -0.24 -0.35 0.83 0.56 0.72 0.66
0.93 -0.8 -1.31 -1.37 -0.53 -0.17 -0.05 -1.05 -0.46 0.01 -0.01 -0.55 0.88 0.53 0.39 0.75
1.47 -0.88 -1.31 -0.88 -1.07 -0.08 -0.04 -0.76 0.06 0.39 0.09 -0.89 0.43 0.25 -0.33 0.55
2.58 -2.12 -3.56 -2.51 -0.51 -2.32 0.81 -0.11 0.49 0.64 -0.5 0.46 -2.45 -2.74 -3.48 -1.05
1.41 -0.04 -1.14 -1.39 -0.32 0.11 0.0 -0.4 0.09 0.12 0.54 0.09 -0.17 -0.37 -0.77 -0.05
1.18 -2.1 -2.22 -3.36 -2.45 -1.58 -0.18 -0.94 -0.88 0.01 -0.5 -0.96 1.49 0.91 0.43 1.3
1.66 -1.53 -5.34 -3.42 -1.99 -0.38 -1.31 -2.43 -1.25 0.48 -0.98 -3.46 1.13 1.13 0.45 1.38
1.71 -0.63 -1.49 -1.2 -0.66 -0.19 -1.04 -1.78 -0.42 0.38 -0.48 -0.57 0.5 0.28 0.26 0.8
1.97 -2.31 -1.7 -1.64 -1.18 -1.04 -0.61 -1.25 -0.86 0.63 0.23 -0.32 0.54 0.07 -0.14 0.81
1.57 -1.68 -2.73 -2.16 -1.49 -0.32 0.52 -0.31 -1.45 -1.17 -0.14 -0.93 0.89 0.8 0.5 0.77
1.59 -1.16 -4.17 -3.66 -4.49 -2.14 -3.29 -1.36 -0.18 0.32 0.57 -0.5 1.25 0.76 0.4 0.96
2.13 -0.67 -3.8 -3.03 -2.76 -2.07 0.09 -1.33 -0.1 1.32 0.45 -0.27 -0.44 -0.33 -0.43 0.07
0.84 -0.52 -0.74 -1.15 -0.23 -0.4 -0.01 -0.35 -0.17 -0.36 -0.15 -0.6 0.51 0.45 0.7 0.5
1.42 -1.0 -0.97 -0.47 -0.87 -0.12 0.68 -0.45 -0.33 0.09 0.11 -0.35 0.36 -0.07 -0.45 0.16
0.53 -1.06 -2.03 -2.06 -1.26 -0.7 -0.7 -1.1 -0.77 -0.94 -0.62 -1.44 1.5 1.04 0.87 1.4
1.39 -0.12 -1.51 -1.94 -0.48 -0.5 -0.44 -0.19 0.11 -0.07 -0.79 -1.34 0.57 0.55 0.55 0.48
1.05 -0.71 -0.9 -1.54 -0.44 -0.58 -0.54 -0.62 -0.38 0.49 0.13 -0.25 0.61 0.06 -0.17 1.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.