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Heatmap: Cluster_93 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - 2.7 - - 3.25 - - - - - - - - - -
- -1.31 1.45 -1.38 0.99 3.06 - - - - - - - 1.1 - -
- - - - - 3.07 - - - - - - - 2.93 - -
- - - - 2.51 3.37 - - - - - - - - - -
- - 1.27 -0.2 1.59 2.82 - - - -0.9 -0.86 0.62 - - - -
- - - - - 4.0 - - - - - - - - - -
- - 0.27 - 0.33 1.9 1.38 0.32 - - - 0.75 - 2.1 - -
- - 2.8 - - 2.82 - 0.96 - - - - - - - -
- 0.19 - - - 0.81 - - - - - - - - 3.71 -
- - - - - 4.0 - - - - - - - - - -
- 0.49 - - -0.73 0.13 - -3.53 - - - - 2.06 1.55 - 2.52
- 1.63 - - - 3.2 1.56 -0.43 - - - - - - - -
- - 2.54 - - 3.02 - -0.35 - 0.37 - - - - - -
- - 1.72 - - 2.69 - -0.95 - - - - - 2.53 - -
- - - - - -1.3 - - - - - - 1.38 2.25 1.03 2.63
- - 1.04 -2.09 0.71 2.82 0.08 0.11 - - -0.18 -1.87 - -1.6 0.47 -
- - - - - 4.0 - - - - - - - - - -
- - 1.7 - 1.25 3.08 - - - - - - - 0.93 - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 1.4 - - - - - - - - 3.74 -
- - 2.99 - - 3.01 - - - - - - - - - -
- - 0.56 -1.06 -0.38 1.91 -0.26 -0.08 - - -0.79 - 0.44 0.93 1.41 0.32
- - -0.76 - 0.36 3.13 1.15 0.47 - - - 0.84 - - - -
- - -0.51 - -1.99 1.2 -0.46 - - - - - 0.83 0.29 1.77 2.48
- - - - - -0.54 - - - - - - - - 3.94 -
- - - - - 1.74 - - - - - - - - 3.66 -
-2.21 -1.76 2.06 0.82 - 3.13 -0.64 - - - -2.65 - - - - -
- - 2.62 - - 2.65 1.82 - - - - - - - - -
- - 1.95 1.49 1.35 2.52 - - - - -1.31 -0.58 - - - -
- - - - - 2.53 - - - - - - - 3.35 - -
- - -0.56 1.78 - 2.99 - 0.93 - - - 1.02 - - - -
- - 1.88 0.63 - 3.43 - - - - - - - - - -
3.03 - - - - 2.97 - - - - - - - - - -
-5.83 - - - -3.35 -1.53 - - - - - - 1.77 2.16 1.42 2.32
-4.16 -2.41 -1.32 -0.32 - 1.17 - -1.96 -2.0 - - -0.99 1.1 - 2.08 2.3
- - -2.03 - - -0.05 -3.71 -3.4 - - - -2.43 2.57 0.78 -0.15 2.56
- - -0.24 0.09 0.88 2.31 0.08 - - - - - - - 2.64 -
-0.77 - - - - 3.37 - -2.33 - - - - - - - 2.29
- - - - - 4.0 - - - - - - - - - -
- - - - - 3.6 1.96 - - - - - - - - -
- 2.58 - - -0.1 1.35 - -0.09 - 2.03 - - - 0.59 - -
2.43 - - 0.63 - 2.26 - -2.38 - 0.95 - - - 1.1 - -
- 0.19 -0.86 - 1.27 1.43 2.28 - - - - 1.29 - - - 0.93
0.3 - 1.11 - - 3.66 - - - - - - - - - -
-1.61 - 1.93 0.7 0.46 1.66 -0.33 1.52 - 1.03 - - - - - -
- - - - - 2.75 -0.47 - - - - - - - 3.09 -
0.1 - - - - 3.9 - - - - - - - - - -
- - - - - -4.32 - -5.36 - - - - 2.0 2.67 1.51 1.43
- - - - - 0.9 - - - - - - - - 3.82 -
- - 0.24 - - -0.76 - - - - - - 1.12 2.03 - 3.0
- - - - - 4.0 - - - - - - - - - -
1.51 - 0.72 -0.72 1.38 2.86 - 0.05 - - - - - - - -
- 0.05 0.18 - -1.69 0.47 - - -1.24 - - - 1.87 1.59 1.04 1.59
- 1.86 2.17 - 0.29 2.73 - - - - - - - - - -
- - - 1.19 - 2.24 - - - - - - - - 3.17 -
- 2.18 0.46 1.28 1.26 2.27 - - - - -1.19 - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - -0.36 -0.95 - - - - - - 0.42 0.64 3.56 -
- - - 0.88 - 3.51 1.46 - - - - - - - - -
-0.04 - 1.76 - - 1.73 -0.91 - - - - - - 0.58 2.65 -
- - - - - 4.0 - - - - - - - - - -
- - - - - -1.82 - - - - - - 2.4 2.11 0.59 2.2
- - - - - 4.0 - - - - - - - - - -
- - - - - 2.23 - - - - - - - - 3.5 -
- - - - - 3.7 - 1.59 - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - 2.7 - - 2.73 1.5 - - - - - - - - -
- - 0.34 0.67 0.46 2.89 - - - - - - - - - 2.12
- - - - - 0.96 - - - - - - - - 3.81 -
- -1.42 1.81 -0.44 - 2.9 0.13 - -0.17 -0.12 - - - 0.03 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.