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Heatmap: Cluster_105 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
3.44 0.29 1.89 1.14 2.11 2.32 8.02 0.73 0.38 0.27 2.6 5.09 0.0 0.0 0.0 0.0
0.57 3.64 25.69 25.89 19.89 19.22 41.4 15.66 2.57 4.17 58.55 14.84 0.54 0.14 0.1 0.71
0.18 0.03 14.63 15.44 24.52 26.17 15.84 1.02 0.28 2.77 5.97 4.29 0.09 0.13 0.35 0.41
26.68 15.26 16.51 18.01 14.82 22.97 30.56 21.94 24.97 24.9 30.35 17.27 15.64 12.63 6.66 14.41
23.64 7.38 9.9 17.38 12.27 20.15 17.01 9.95 20.29 31.51 24.55 12.6 18.07 14.11 8.64 22.93
0.28 35.19 47.34 47.24 56.36 81.37 75.41 134.52 0.55 0.0 30.39 51.16 0.0 0.0 0.0 0.0
14.01 5.34 7.7 11.3 8.92 8.85 22.39 9.75 9.4 11.2 27.28 12.9 4.2 3.48 2.67 4.09
54.66 29.3 17.99 20.51 24.89 28.94 42.27 34.39 37.77 41.29 54.02 48.66 112.29 94.55 77.29 71.9
0.4 1.61 0.58 0.63 1.53 2.75 2.5 3.95 0.78 0.49 1.13 1.09 7.46 9.4 1.76 6.75
61.82 19.9 31.51 42.91 28.24 29.3 53.0 36.79 39.02 46.35 53.93 40.85 32.03 28.6 23.4 34.71
75.83 43.92 20.78 27.94 33.7 38.64 67.65 27.09 68.48 63.94 77.31 64.08 20.37 18.17 20.79 30.58
0.13 0.0 0.08 0.0 0.0 0.02 0.02 0.13 0.0 0.0 12.21 7.26 0.1 0.0 0.0 0.79
15.07 25.61 30.18 29.87 51.41 38.83 77.6 2.36 1.98 1.15 8.78 18.94 2.39 1.38 0.36 3.72
0.0 0.0 6.67 5.22 9.78 18.54 5.41 7.29 0.03 0.03 4.47 6.24 0.0 0.0 0.39 0.0
15.92 2.09 3.55 4.25 8.96 8.79 27.06 16.37 0.0 0.03 0.81 2.73 54.14 52.92 30.88 59.0
37.88 13.67 23.78 33.57 22.51 25.47 35.06 24.25 37.45 36.89 42.2 29.17 21.32 16.7 13.67 26.08
0.36 0.74 0.0 0.0 0.11 0.15 0.47 0.59 0.0 0.12 0.39 0.26 4.63 1.72 0.38 1.95
15.53 14.77 12.53 15.15 14.42 16.79 46.81 21.12 11.83 12.27 22.58 12.56 16.28 19.56 10.14 19.02
3.46 0.79 5.31 5.78 15.08 11.66 3.11 1.26 0.62 0.0 1.32 0.1 3.07 5.02 3.01 1.64
40.55 17.76 12.12 14.2 22.75 19.62 41.17 19.84 29.12 34.44 47.58 44.95 15.61 14.97 11.67 19.3
18.03 9.92 7.67 8.42 9.69 11.0 11.66 9.69 14.57 19.1 20.2 16.95 26.88 20.26 16.05 29.38
15.03 8.52 8.64 11.52 13.08 10.36 15.5 13.84 13.9 12.22 14.42 12.56 27.81 22.21 16.66 23.87
18.75 7.45 5.51 8.08 8.3 12.53 18.23 15.26 17.09 19.48 28.0 15.68 27.85 20.15 17.02 30.4
109.47 81.08 28.79 41.17 39.63 52.82 76.69 47.49 62.4 78.15 95.4 74.34 44.72 28.69 24.28 59.26
7.26 8.77 41.42 25.18 57.52 45.67 7.7 5.52 9.85 5.45 1.71 0.35 7.19 1.89 5.51 6.12
29.75 17.24 7.17 10.19 11.46 14.85 8.6 5.76 14.12 17.8 25.77 20.81 6.9 6.11 3.9 9.42
11.01 6.11 4.01 2.72 5.18 6.81 7.05 6.43 5.1 6.01 13.12 6.62 11.36 7.81 7.27 11.31
63.97 27.14 24.5 29.59 34.62 31.95 38.6 25.38 48.05 62.23 56.87 36.49 37.36 28.58 30.54 53.07
93.87 35.76 41.12 38.49 41.7 58.55 54.27 27.87 39.78 48.9 80.43 64.85 82.66 78.58 68.02 77.5
27.9 8.21 8.14 11.85 20.25 20.71 34.91 19.31 20.43 26.38 41.34 36.11 13.14 12.34 7.71 13.32
40.31 23.35 32.04 37.6 31.14 33.27 35.16 29.95 37.42 47.32 51.6 40.79 28.78 27.84 19.96 30.38
685.59 66.64 180.53 158.91 135.41 147.35 245.3 240.75 155.47 80.79 457.87 467.0 125.88 105.21 116.7 97.07
22.33 6.08 8.94 10.32 11.28 12.95 19.36 9.06 10.38 15.25 23.1 13.84 10.67 6.63 4.37 10.62
4.34 0.15 0.91 0.1 0.08 0.37 0.48 0.78 0.35 0.72 2.58 4.22 63.59 41.31 7.25 49.77
74.67 25.9 38.91 51.53 38.79 51.75 63.76 50.25 51.3 65.73 66.01 32.03 132.05 102.32 72.23 118.96
0.0 0.0 0.0 0.0 0.09 0.0 0.16 0.05 0.0 0.0 0.0 0.12 0.0 0.0 0.31 0.0
6.39 8.71 16.99 28.57 25.08 35.57 21.15 4.81 11.82 18.21 39.92 25.63 4.61 2.78 2.22 4.56
66.17 36.62 40.8 45.76 44.86 54.42 57.17 45.81 61.44 71.73 78.53 39.81 51.9 38.95 29.13 60.38
1.05 0.0 0.23 0.28 0.47 0.23 0.0 0.0 0.0 0.0 0.35 1.49 0.0 0.0 0.0 0.0
136.14 74.51 68.41 47.33 51.63 57.33 106.08 73.94 41.84 89.2 99.29 104.07 94.92 90.42 86.27 124.44
40.86 5.99 8.97 12.88 13.92 21.75 9.74 5.29 4.27 6.64 16.67 12.02 17.52 12.33 8.63 15.08
3.87 3.22 6.6 8.61 10.76 6.92 14.01 3.52 2.59 3.38 15.16 8.17 7.97 4.7 3.62 7.32
14.56 9.18 12.16 11.01 16.82 10.37 23.86 25.12 6.4 5.16 24.77 19.8 4.33 4.25 3.97 6.49
0.0 0.04 0.59 0.27 0.41 0.32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
13.55 5.86 16.48 22.77 12.74 20.77 20.38 15.39 15.14 13.0 25.02 12.58 24.23 14.35 28.44 24.37
0.31 0.3 0.1 0.12 0.31 0.47 1.56 0.34 0.59 0.15 0.77 0.8 1.44 0.75 1.61 1.32
16.41 8.79 11.43 14.73 8.78 9.45 12.61 12.08 14.12 15.97 14.72 9.2 11.7 8.07 5.59 13.41
23.62 10.68 6.19 7.66 11.04 6.86 16.79 13.12 9.81 10.12 14.62 7.07 26.4 16.64 15.03 23.19
115.7 53.35 57.44 75.86 53.45 72.6 99.18 80.55 79.51 98.76 105.72 57.37 163.4 127.77 121.62 207.31
16.62 10.01 5.27 6.15 8.66 12.39 13.2 13.03 12.71 19.15 17.04 11.92 17.46 12.45 8.96 15.69
0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
50.67 29.81 33.09 48.02 48.1 41.49 67.08 41.02 27.05 28.27 66.96 37.55 37.0 27.25 24.5 35.38
142.56 30.14 18.42 28.54 25.49 34.66 53.72 21.54 45.0 76.79 87.04 46.88 39.2 24.44 17.67 35.36
20.53 20.37 61.55 34.3 109.21 61.47 42.06 12.36 31.4 22.0 16.19 3.87 10.62 11.82 47.58 10.08
2.61 2.28 3.89 4.76 8.14 5.23 6.5 2.69 1.14 1.0 1.19 4.15 2.38 1.19 1.21 2.54
27.15 14.34 7.4 7.56 7.57 9.5 23.08 11.85 8.8 13.16 27.28 23.66 16.21 13.17 6.75 18.65
9.07 5.29 5.1 6.09 8.12 8.43 7.53 3.96 10.16 11.73 8.65 8.23 7.8 4.84 4.17 10.27
6.61 1.33 0.89 0.78 1.73 1.26 3.58 2.3 3.29 3.08 4.32 2.74 4.22 3.21 0.0 5.47
0.93 0.0 0.49 0.21 0.44 1.0 0.92 1.17 0.0 0.39 1.2 0.99 3.68 1.58 1.81 1.97
59.54 28.72 22.73 25.5 29.97 33.3 72.17 35.68 70.07 85.55 70.86 57.06 21.22 18.28 13.26 33.29
1.62 0.17 0.38 0.86 0.56 0.15 0.26 1.08 0.28 0.26 0.78 0.89 3.29 1.19 1.0 2.47
135.47 49.29 24.98 26.44 28.53 27.17 39.9 26.41 50.9 50.68 85.28 84.58 15.22 17.21 14.42 24.62
0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.81 0.0
9.7 1.87 0.36 0.78 1.56 2.93 0.21 0.08 0.7 1.26 4.41 3.57 0.27 0.51 1.48 0.44
25.31 16.28 8.2 8.61 16.56 12.48 37.42 18.05 16.96 19.78 43.91 25.53 35.25 18.24 13.1 38.22
124.2 13.22 32.19 25.62 26.28 21.27 33.98 24.52 10.34 5.51 45.63 72.53 25.17 26.46 24.51 27.46
0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.39
0.2 1.4 0.13 0.0 0.29 0.53 1.9 1.44 0.0 0.21 0.0 0.0 4.44 2.77 0.0 5.44
30.13 19.55 15.13 19.76 16.25 19.95 23.82 15.42 21.65 27.61 28.54 17.27 27.47 17.99 10.3 24.11
21.63 13.98 10.97 16.56 16.4 27.16 31.12 16.85 35.25 29.52 40.8 24.23 13.77 12.09 5.5 18.25
129.65 7.12 96.13 111.68 168.52 130.35 137.66 45.41 111.69 220.42 323.53 257.03 9.25 8.07 5.1 12.21
32.87 9.33 5.81 4.94 8.01 12.73 14.54 7.19 5.88 9.25 24.49 19.43 38.44 35.5 22.09 38.42
114.18 24.61 38.58 44.6 48.16 44.79 108.32 45.57 49.9 61.92 131.14 99.94 46.02 40.41 34.1 53.32
20.74 5.25 11.76 11.56 7.29 9.72 21.98 19.49 14.62 12.43 15.92 18.67 43.0 39.37 34.68 34.67
26.02 4.34 12.66 10.34 16.16 16.3 48.83 21.71 13.18 14.63 43.51 27.27 67.35 61.17 58.02 65.22
16.32 2.68 6.56 7.01 11.43 11.6 9.03 8.07 16.57 19.04 13.13 13.08 13.02 8.24 5.47 13.75
1.45 0.65 0.24 0.09 0.41 0.6 1.34 0.83 0.36 0.37 0.6 0.15 3.08 2.04 0.0 2.46
3.08 0.51 0.13 0.44 0.06 1.08 1.0 1.15 0.76 0.99 3.4 3.51 3.6 4.21 3.23 2.77
0.0 0.04 26.77 33.35 28.8 30.86 19.14 0.04 0.0 0.0 1.32 1.71 0.0 0.0 0.4 0.0
18.54 11.94 12.63 17.3 21.66 20.86 16.42 17.85 31.36 30.1 25.9 19.03 9.6 6.97 2.97 13.35
89.38 37.71 35.14 35.96 37.58 37.75 66.27 32.4 39.03 55.94 77.91 64.87 52.42 50.18 49.3 53.96
10.04 7.08 4.52 6.21 5.79 6.32 22.04 8.14 14.51 15.77 21.33 10.29 7.79 5.95 2.89 11.36
2.69 1.27 0.3 1.08 0.05 0.0 0.0 0.0 0.0 0.08 0.8 1.79 0.0 0.09 0.37 0.52
27.11 10.63 18.91 25.65 22.15 26.83 19.37 16.08 28.55 29.79 36.93 22.76 25.09 21.5 14.37 33.31
55.07 18.52 12.14 11.74 11.91 18.5 46.88 25.69 31.68 29.32 41.43 45.74 58.26 56.93 51.57 54.72
3.21 2.74 1.36 1.36 3.13 1.98 7.13 3.0 5.35 3.61 2.49 1.65 4.09 4.87 7.59 3.69
254.93 118.04 128.91 177.4 135.99 160.0 157.42 113.24 186.43 195.32 235.4 176.88 125.1 99.52 92.23 118.51
12.92 5.65 8.59 10.8 8.48 12.99 12.68 11.34 10.45 11.23 19.02 13.7 16.84 7.56 5.73 12.16
7.94 2.13 0.73 1.39 0.6 2.64 0.91 0.26 4.56 10.38 9.15 1.21 7.57 4.69 1.87 5.75
1.19 0.55 0.44 0.81 1.15 1.04 1.95 0.88 1.86 1.13 2.31 1.39 1.69 1.01 1.85 2.78
1.19 0.99 0.16 0.37 0.09 0.21 0.08 0.01 0.75 0.74 0.88 0.27 0.5 0.52 0.2 1.19
0.16 0.08 0.0 0.0 0.0 0.31 0.0 0.0 0.94 0.12 1.06 0.12 0.0 0.0 0.29 0.0
62.71 25.79 38.21 50.03 44.63 40.88 53.18 44.05 57.92 49.58 62.6 44.13 48.39 29.88 24.35 50.43
0.2 0.29 3.14 2.46 2.88 1.91 0.41 0.71 0.0 0.0 0.0 0.14 7.57 4.5 2.25 7.41
88.72 68.53 30.67 35.75 55.5 37.44 94.76 32.69 50.34 73.59 98.78 61.2 21.31 18.31 10.7 32.01
11.49 6.62 7.05 7.63 7.44 9.2 29.51 10.38 7.71 4.96 8.06 5.11 28.28 26.21 20.95 18.47
22.73 9.4 19.38 22.92 23.27 25.12 22.97 18.93 22.51 24.49 33.6 20.24 22.08 12.04 9.29 19.94
8.68 1.6 1.98 2.71 2.66 2.29 10.45 4.05 5.7 4.8 4.8 5.64 4.3 3.2 1.85 5.24
49.71 13.23 13.79 16.43 13.5 14.02 26.36 14.64 19.03 24.22 24.13 18.44 18.64 23.87 23.02 30.79
28.85 8.53 4.42 6.69 7.02 10.97 7.93 7.06 1.46 1.25 21.93 21.57 16.74 14.54 5.38 16.28
1.71 1.72 0.51 0.61 0.84 1.08 0.97 0.7 1.52 1.7 1.97 0.92 4.69 2.97 1.31 3.62
4.05 0.76 8.88 6.61 6.43 8.05 12.01 3.65 7.97 6.68 5.38 0.73 4.11 2.35 4.93 2.3
0.0 0.0 0.0 0.0 0.0 0.0 0.89 0.0 0.0 0.0 0.0 0.0 44.08 54.99 202.16 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)