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Heatmap: Cluster_313 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.0 -0.06 -3.06 -2.83 -1.02 -0.15 -1.48 -1.91 -6.84 - -3.1 -2.72 1.55 1.95 1.16 1.56
0.77 -0.37 0.29 0.3 0.72 0.91 -0.15 -1.32 -1.15 -1.15 -0.41 -0.56 -0.27 0.05 -0.14 0.19
-1.58 -6.36 -2.15 -3.15 -2.03 -1.49 -1.5 -1.61 - - -5.05 -2.98 1.8 2.21 1.49 1.57
-0.31 -0.29 -0.18 -0.42 0.18 0.52 0.29 -0.86 -0.98 -1.45 -0.22 -0.17 0.57 0.63 0.51 0.41
-2.45 -2.38 -1.79 -4.41 -1.8 -1.69 -4.24 -2.81 -6.17 -6.11 - -6.18 1.93 2.48 1.01 1.62
-0.31 -1.18 -0.97 -0.46 -0.19 0.22 -0.6 -1.47 -1.8 -1.99 -0.53 -1.04 1.17 1.39 0.69 1.16
-0.07 -0.88 -0.99 -1.86 -0.74 -0.51 -0.63 -0.37 -4.86 -5.98 -2.03 -0.67 1.24 1.5 1.37 1.21
0.33 -2.67 -0.36 -1.06 0.2 0.34 -0.2 0.11 -1.03 -1.34 -0.13 -0.89 0.93 0.83 0.18 0.85
-1.41 -0.55 -1.71 -2.15 -1.71 -0.2 -2.03 -1.0 - -6.32 -4.55 -2.41 1.72 2.19 1.31 0.94
-1.13 -0.62 -0.92 -1.49 -0.35 -0.18 -1.33 -0.61 -4.6 -2.72 -3.25 -2.3 1.44 1.62 1.57 1.02
-1.95 -3.13 -3.5 -4.09 -2.32 -1.4 -1.69 -1.12 - - -4.13 -2.18 1.94 1.86 1.21 2.03
-0.27 -1.16 -0.7 -1.09 -0.02 0.43 -2.01 -1.64 -2.62 -3.88 -1.67 -1.04 0.99 1.61 1.7 0.52
1.68 0.75 -0.04 0.21 1.17 0.73 1.36 1.26 - - - - - - -3.08 -
0.41 -0.12 -1.3 -1.14 -0.14 -0.34 -1.49 -0.54 - - -1.72 -0.52 1.49 1.06 0.56 1.47
0.5 0.59 -0.45 -0.76 0.33 0.16 0.29 -0.32 -1.31 -1.74 -1.15 -0.56 0.45 0.65 0.51 0.21
-0.92 -0.87 -1.13 -2.3 -0.57 -0.45 -1.85 -1.28 -4.16 -3.73 -2.29 -2.74 1.75 2.07 0.56 1.39
-0.82 0.03 -0.69 -0.53 0.11 0.47 0.68 -0.3 -0.57 -0.94 -0.38 -0.88 1.0 0.09 -0.31 0.87
-0.76 -0.46 -1.05 -0.99 -0.32 -0.33 -0.4 -1.37 -0.97 -2.07 -1.19 -1.19 1.61 1.06 0.14 1.63
-5.02 0.17 -1.12 -1.4 -0.21 -0.07 -1.28 -0.41 -6.45 -4.8 -2.45 -2.87 2.06 0.97 1.29 1.05
-0.08 0.56 -0.84 -1.29 0.19 1.27 -1.02 -1.07 - - -3.85 -1.8 1.17 1.61 -1.76 1.1
0.82 -0.68 1.64 - 1.91 0.29 - -0.17 - - - - - - 2.21 -
0.93 -1.63 -0.72 0.14 1.58 1.49 0.14 -0.45 -8.21 - -3.66 -2.58 0.57 -0.36 -1.71 0.69
0.08 -0.25 -0.19 -0.65 0.15 0.31 -1.51 -1.54 -2.37 -2.32 -4.27 -1.8 0.6 1.53 1.04 1.23
-0.75 -0.67 0.34 0.09 0.23 0.86 -0.51 -0.45 0.33 -2.52 -0.63 -0.85 0.24 0.45 0.57 0.43
0.06 -0.86 -0.12 -0.7 0.35 0.56 0.38 -0.41 -1.13 -1.36 -0.45 0.02 0.29 0.34 0.94 0.09
-3.34 -10.29 -3.63 -6.6 -2.98 -2.78 -4.33 -4.34 - - -10.07 -7.85 1.9 2.5 1.57 1.61
-0.73 0.67 0.39 0.15 1.1 1.61 0.59 0.01 -5.4 -6.25 0.46 0.53 -2.08 -3.75 -6.07 -0.99
0.12 -1.0 -1.32 -1.32 -0.12 0.02 0.7 0.38 -3.39 -5.25 -0.64 -1.63 1.5 0.93 -0.41 1.12
-0.64 0.98 0.66 0.72 0.76 1.12 -3.17 -3.01 -2.75 -4.01 -2.97 -1.76 -0.17 1.19 0.03 0.29
-0.58 -0.35 -0.63 -0.92 -0.28 -0.74 -1.25 -1.13 -2.59 -3.21 -2.59 -2.17 1.35 1.9 1.21 0.85
-0.19 -3.66 -3.89 -4.56 0.65 -0.28 -0.78 -0.82 - - - - 2.11 1.51 0.7 1.39
0.58 -0.17 -0.63 -1.05 -0.01 0.05 -0.08 0.17 -2.75 -3.37 -1.6 -1.2 1.0 0.71 0.66 1.11
-0.78 0.07 -1.18 -1.91 -0.74 -0.96 -0.68 -1.08 -4.0 -3.7 -2.97 -2.66 1.46 1.81 1.7 0.59
-1.62 -3.06 -3.28 -4.88 -2.67 -2.05 -2.03 -1.88 -4.91 -7.17 -3.96 -3.24 1.3 1.02 2.14 2.43
-0.16 -0.02 -0.36 -0.7 0.04 0.76 0.78 0.06 -1.29 -2.11 -0.08 -0.02 0.3 0.15 0.17 0.27
-1.19 - -2.75 -4.0 -0.4 0.22 - -2.36 - - -2.65 -1.43 -0.84 0.06 3.4 -0.97
-0.4 -0.19 -0.71 -1.86 -0.12 0.15 0.4 0.05 - -8.55 -1.62 -0.48 1.15 1.27 0.64 0.89
0.38 -0.43 -1.05 -0.53 -0.55 0.64 0.78 -0.58 - -5.82 - -3.89 1.14 1.09 -1.55 1.76
-0.21 -0.72 -0.49 -1.55 -0.37 0.26 0.59 -0.4 -0.51 -1.43 -0.01 -0.89 0.19 0.9 1.37 0.07
0.0 -1.68 -0.97 -1.39 -0.06 0.19 -1.1 -0.14 -5.68 -4.45 -1.35 -0.91 1.18 0.89 1.6 1.12
0.8 0.47 - -4.66 0.64 -0.33 0.27 0.05 - - - - 1.68 0.42 0.85 0.92
0.62 0.08 -0.87 -2.71 -0.04 0.17 0.24 -0.58 -1.21 -2.15 -0.7 -1.16 1.22 0.91 0.53 0.47
-0.61 0.18 -2.26 - -0.81 1.51 1.56 1.97 -2.68 - -0.27 0.31 - - -0.37 -0.47
-1.31 1.0 1.0 -0.47 2.32 2.02 -3.48 - - - - -1.24 - -1.99 0.08 -
0.46 0.15 -0.06 -0.64 0.49 0.36 0.24 -0.45 -0.64 -1.32 -0.61 -0.01 0.25 0.27 0.09 0.21
-0.36 -1.85 0.12 -1.05 0.01 0.27 0.19 -1.07 -1.09 -0.9 -0.26 -0.32 0.68 0.87 0.95 0.62
-1.19 0.05 -1.73 -0.91 0.21 1.25 -1.86 -4.26 - - - -1.83 1.92 0.31 - 2.18
0.18 -0.95 0.42 -0.28 0.72 1.1 0.46 0.52 -1.28 - -0.5 0.3 0.98 -2.44 - 0.12
-0.63 -1.2 -2.69 -4.86 -2.26 -1.72 -0.17 0.33 -6.2 -6.14 -3.78 -1.75 1.69 1.82 1.89 0.3
-0.23 -3.64 -2.03 - -1.1 0.33 -0.38 0.24 - - - -0.28 1.2 1.74 -0.15 1.92
-4.93 0.9 0.08 -0.59 0.97 0.93 -1.05 -2.08 -5.05 -4.57 -2.08 -2.32 0.73 -0.34 2.03 -0.39
-0.18 -2.99 0.43 -1.25 0.57 0.69 0.28 -0.84 -2.66 -4.19 -0.07 -0.74 0.82 0.73 0.37 0.9
-0.14 -0.56 -0.89 -0.67 -0.58 -0.48 0.37 0.04 -1.73 -2.79 -1.58 -2.32 1.31 1.08 0.98 1.0
-1.21 - -1.62 -1.68 -1.68 -0.9 -1.86 -1.13 - -6.33 -4.71 -2.7 1.93 2.19 1.64 0.72
-1.95 1.67 0.18 -0.79 1.5 1.49 -0.79 0.88 -1.04 -1.76 -3.53 -2.05 -2.3 -0.94 -0.74 -1.42
0.75 1.3 - - 0.74 2.17 0.53 -2.06 - - - - - 0.43 - 1.4
-2.95 -7.66 -3.19 -4.54 -2.43 -2.32 -2.84 -2.7 - - -7.48 -4.42 2.21 2.37 0.75 1.81
-0.76 -1.85 -1.68 -1.94 -1.2 -0.22 -0.37 -0.67 -8.22 - -1.62 -1.12 1.51 1.76 0.73 1.68
-0.03 -0.09 -1.27 -2.16 -0.49 -0.51 -0.76 -1.32 -2.91 -1.8 -1.65 -1.69 1.51 1.27 1.34 1.13
-1.33 -2.31 -2.61 -4.91 -0.29 -1.0 -4.33 -2.37 - -6.93 - -5.42 0.77 2.21 2.71 -0.49
-0.37 -1.8 -1.53 -2.69 -0.39 -0.98 -1.23 -0.99 -3.95 -3.89 -2.44 -2.96 1.58 1.26 1.58 1.78
0.34 -0.19 0.12 -1.14 0.42 0.97 0.64 0.01 -4.14 -3.17 -0.65 -0.12 0.35 0.12 0.03 0.43
1.0 -0.37 -0.47 -1.78 0.2 0.86 0.8 0.94 -2.86 -1.99 -0.96 -0.97 -0.71 -0.29 0.46 0.45
0.28 0.49 -0.17 -0.53 0.16 0.01 -0.2 -0.64 -0.61 -1.36 -0.64 -0.25 0.78 0.43 0.6 0.07
-0.38 -4.71 -1.6 - -1.47 -0.05 -0.33 -1.03 - -3.56 -1.2 -3.63 1.63 0.63 1.29 2.19
0.33 0.21 -0.96 -1.13 -0.29 -0.11 -0.24 -0.69 -0.77 -1.33 -1.37 -1.13 1.03 0.9 0.98 0.76
-0.19 -2.11 0.88 -0.69 0.85 1.18 0.32 -0.11 0.07 -3.26 -0.7 0.11 0.08 -0.39 -1.04 0.06
0.22 -0.15 -0.36 -0.98 -0.05 0.01 0.08 -0.76 -2.09 -2.69 -0.52 -1.24 0.87 1.26 1.22 -0.04
0.01 -0.81 -0.08 -0.65 0.35 0.55 -0.67 -1.47 -1.65 -1.59 -0.67 -0.34 1.24 0.81 0.35 0.72
0.22 -0.4 0.21 -1.04 0.66 0.84 -0.36 -1.55 -3.14 -1.32 -2.27 -0.97 0.08 0.66 0.95 1.09
0.3 -1.4 -0.94 -0.64 -0.08 -0.14 -0.09 0.46 -5.96 -1.88 -1.45 -0.12 0.97 0.73 0.72 1.15
-1.53 -3.03 -1.45 -2.86 -1.31 -0.97 -1.5 -1.56 -6.32 -7.0 -2.59 -2.18 1.83 2.02 1.58 1.26
0.42 -0.06 -0.41 -0.61 0.62 0.04 0.03 -0.65 -1.03 -1.43 -0.85 -0.15 0.71 0.42 0.37 0.58
0.23 0.17 -2.96 - -0.73 -0.56 0.06 0.63 - - - - 1.75 0.17 -0.08 2.09
-1.85 1.68 0.42 -0.71 1.44 1.29 0.94 0.4 - -7.03 -1.03 0.01 -1.94 -2.64 -3.77 -2.5
-0.49 -2.41 -1.21 -1.71 -0.26 0.13 -0.63 -1.37 - - -2.52 -0.82 1.58 1.7 1.04 1.24
-0.34 -0.94 -1.39 -1.59 -0.69 -0.36 -0.0 -0.69 -1.77 -2.0 -1.2 -1.1 1.32 1.51 1.08 1.03
-2.8 -2.22 -2.47 -4.02 -2.54 -2.52 -2.08 -1.77 -5.86 -6.22 -5.15 -3.09 1.85 2.28 1.73 1.36
-0.18 -0.81 0.42 -0.48 1.27 0.76 0.02 -0.88 -0.77 -1.33 -0.69 0.05 0.27 0.41 -0.34 -0.19
-0.3 -2.04 -0.61 -0.97 0.1 0.15 -1.17 -0.83 -1.66 -3.14 -1.54 -0.93 1.46 0.99 0.53 1.64
-1.73 -4.2 -2.67 -2.05 -1.71 -2.06 -2.93 -3.09 -3.11 -3.47 -3.46 -3.98 2.0 2.08 1.29 1.77
-0.29 -1.1 -1.35 -1.21 -0.54 0.03 -0.43 -1.53 -3.19 -4.72 -2.18 -1.42 1.66 1.55 0.81 1.31
-3.12 0.3 -1.94 -0.61 -1.8 1.07 -1.61 0.12 - -3.31 - - 1.15 -3.12 -0.05 2.71
-1.55 -5.25 -3.92 -3.71 -3.21 -1.79 -2.13 -2.02 - - - -3.77 2.32 2.12 0.34 1.98
-0.04 -0.19 -1.07 -2.66 -0.52 -1.06 -0.98 -1.6 -4.1 -4.62 -3.47 -2.47 1.43 1.72 1.65 1.0
-0.64 -1.07 -3.95 -0.88 -0.35 0.68 -2.3 -0.81 -1.65 -1.45 -2.29 -3.98 1.29 1.63 1.06 1.35
0.7 -0.26 0.54 0.19 0.72 1.01 0.51 -1.59 -1.08 -1.15 -0.87 -0.43 -0.14 -0.28 -0.21 -0.47
1.05 - 0.86 -0.21 2.34 1.55 -0.77 -1.14 - - - 0.37 -2.09 -2.19 -1.11 -
-0.22 -8.44 -2.7 -2.88 -1.11 -0.68 -0.68 -0.1 - - -5.25 -3.36 1.61 1.9 0.91 1.77
0.05 -0.61 -0.79 -0.96 -0.11 0.15 0.51 -0.27 -0.98 -1.34 0.11 -0.57 0.85 0.52 0.84 0.32
-0.44 -0.45 -0.37 -1.93 0.18 0.18 -0.58 -0.5 -2.79 -2.95 -0.6 -0.96 1.52 0.77 1.17 0.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.