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Heatmap: Cluster_193 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.84 - - - - -0.95 -3.59 0.9 2.21 2.31 -2.23 - 0.57 - - -1.14
-0.37 -0.32 -2.06 -1.87 -2.02 -1.72 -0.27 0.47 0.97 2.03 -1.05 -1.59 0.21 -0.02 -0.98 0.72
0.87 0.01 -3.33 -1.31 -1.66 -0.8 -2.99 -1.54 1.96 1.9 -1.25 -1.48 -0.58 -0.32 -0.44 -0.53
0.74 -2.55 -3.11 -2.58 -2.23 -2.08 -1.88 0.31 -0.26 2.03 -2.19 -1.51 0.79 0.5 0.34 1.01
1.9 - - - - - - 0.53 - 3.44 - - - - - -
0.83 -0.07 -2.3 -3.33 -3.29 -1.62 -0.42 0.88 0.92 1.16 -1.97 -1.31 -0.01 0.1 0.47 0.78
- 0.84 -5.31 -4.97 -4.18 - -3.98 1.54 2.09 2.78 - - - - - -
0.93 0.39 -1.9 -1.42 -1.32 -1.51 0.04 0.98 0.96 1.18 -0.47 -0.46 -0.69 -0.34 -0.37 -0.9
0.33 -3.57 -2.91 -2.95 -7.24 -4.41 -1.5 0.82 1.51 1.34 -0.46 -2.35 1.02 0.47 -0.31 0.78
0.83 -2.28 -1.7 -3.0 -2.19 -1.92 -0.02 0.54 1.67 1.4 -1.46 -2.43 0.35 0.05 -0.3 0.23
0.29 0.43 -1.9 -3.97 -2.22 -1.89 -1.52 -0.04 0.31 1.23 -2.04 -3.39 1.21 1.39 0.11 0.42
0.3 -1.2 -1.73 -3.02 -2.1 -2.8 -1.74 -0.27 0.74 1.59 -1.24 -1.15 1.06 0.77 0.66 0.56
0.41 -1.33 -1.34 -2.09 -0.68 -0.22 0.01 0.41 0.91 1.22 -0.01 -0.92 0.16 -0.16 -0.37 0.38
0.88 -0.32 -3.19 -3.73 -3.22 -3.38 -0.4 0.73 0.99 1.14 -0.72 -0.57 0.6 0.34 -0.73 0.76
0.66 -2.29 -3.58 -2.47 -0.64 -0.73 -0.48 0.54 1.56 2.34 -0.77 -1.37 -2.16 -0.62 -2.5 -1.02
0.75 -0.31 -1.33 -3.93 -1.75 -1.92 -1.7 -0.92 1.48 0.92 -1.16 -0.74 0.54 0.56 0.11 0.94
0.55 -1.44 -2.93 -4.59 -4.48 -2.05 -1.53 0.15 -0.42 1.72 -0.67 -1.19 1.15 0.63 0.91 0.59
0.51 -0.0 -2.44 -2.69 -2.15 -5.07 0.76 0.47 1.56 2.07 -0.34 -1.61 -0.75 -1.59 -2.22 -1.0
0.77 -0.22 -1.15 -0.44 -1.61 -0.85 0.22 -0.13 1.36 1.8 -0.01 -0.31 -1.36 -1.73 -1.6 -1.28
0.89 -1.23 -2.08 -1.54 -1.34 -0.83 -1.94 0.55 1.63 1.6 -1.08 -1.96 -0.28 -0.29 -0.54 0.35
0.69 -0.1 0.1 -0.41 0.04 -1.02 -1.62 -0.53 0.79 1.92 -0.89 -0.41 -0.79 -1.3 -1.13 -0.26
0.51 -0.44 -1.7 -2.09 -1.43 -1.27 -0.28 0.42 1.07 1.35 0.14 -0.06 0.0 -0.32 -0.31 0.04
0.79 -0.08 -2.16 -2.69 -1.68 -1.2 -0.68 0.29 0.48 1.63 0.01 -0.44 0.37 -0.18 -0.39 0.26
1.17 -1.59 -2.49 -2.39 -3.03 -2.09 -0.82 0.64 0.51 1.45 -0.06 -0.53 0.4 0.27 -0.49 0.6
-0.52 0.14 -3.11 -2.44 -5.3 -6.46 -2.35 -0.46 0.99 3.09 -1.78 -2.91 -0.43 -1.03 -1.95 -0.84
0.29 -2.28 -2.08 -3.21 -2.22 -2.14 -0.75 0.27 0.22 1.57 -1.07 -2.13 1.15 0.94 0.65 0.52
-0.24 -1.29 -1.81 -3.32 -2.74 -1.21 -2.04 -0.56 -0.94 1.47 -0.89 -1.58 1.39 0.87 -0.11 1.73
-0.28 -0.55 -4.94 -5.02 -4.49 -2.72 -4.61 0.82 1.57 2.41 -4.67 -4.78 -0.08 0.52 -0.47 -0.02
0.79 -0.1 -1.69 -2.22 -1.97 -2.1 -0.89 0.06 1.31 1.77 -0.86 -1.19 0.0 0.04 -0.35 0.09
0.28 -0.86 -4.57 -3.37 -2.7 -2.61 -2.0 -0.51 0.22 0.61 -0.54 -1.43 1.04 1.23 1.05 1.37
0.8 -2.2 -2.43 -2.75 -1.98 -0.92 -0.9 -0.0 0.68 1.29 -1.12 -2.33 1.09 0.5 0.01 1.1
0.82 0.49 -1.74 -2.37 -1.44 -1.79 -0.07 0.66 0.32 0.98 -0.85 -0.86 0.65 0.1 -0.24 0.42
1.05 0.33 -1.46 -1.25 -0.9 -0.88 -1.34 0.61 0.98 1.23 -0.67 -0.42 -0.4 -0.33 -0.55 -0.09
-0.23 -1.8 -4.42 -5.35 -3.35 -3.65 -1.47 0.73 0.42 2.56 -1.11 -2.36 0.84 0.04 -0.79 0.37
1.2 -1.92 - - - -5.27 -2.2 -0.21 2.05 1.99 - - 1.15 -0.95 -2.34 0.37
0.18 0.01 -3.81 -3.23 -2.81 -2.26 -2.26 1.03 0.74 1.51 -2.47 -3.73 1.14 0.45 -0.21 0.9
-0.61 -0.61 -2.04 -2.27 -1.21 -1.14 0.4 -0.08 0.3 1.63 -0.1 -0.78 0.7 0.08 0.24 0.46
0.33 0.44 -0.86 -0.97 -0.6 -0.3 -0.16 -0.17 0.48 1.74 -0.43 -0.82 -0.01 -0.54 -0.47 -0.68
-0.02 -1.53 -4.11 -4.62 -3.01 -4.07 -2.46 0.51 1.33 2.35 -2.62 -2.23 0.21 0.13 0.01 0.6
-0.32 -0.22 -3.1 -3.79 -2.06 -2.25 0.71 0.32 0.86 2.36 -1.41 -1.5 -0.32 -0.69 -1.32 0.4
1.11 0.61 -2.25 -2.38 -1.41 -1.38 -2.07 -0.3 0.97 1.42 -2.55 -2.02 0.19 0.37 -0.08 0.74
1.44 -0.92 -2.62 -2.87 -1.76 -1.12 -1.15 0.77 0.8 1.46 -0.72 -1.44 0.75 -0.17 -0.86 -0.06
0.36 -1.31 -2.76 -2.85 -2.56 -2.06 -1.25 0.16 1.75 2.6 -0.99 -1.39 -1.26 -1.26 -1.44 -0.79
0.78 -1.07 -2.66 -2.87 -2.17 -2.08 -0.88 -0.74 1.6 1.72 -1.9 -2.64 0.53 0.08 -0.33 0.89
0.87 -0.68 -1.78 -1.79 -1.39 -1.8 -0.45 0.85 1.05 1.43 -0.19 -0.44 -0.08 -0.49 -0.39 -0.04
0.79 -0.9 -1.13 -1.16 -0.19 -0.16 -0.05 0.5 0.82 1.14 -0.79 -1.39 0.36 -0.22 -0.7 0.0
-0.27 -2.28 -2.34 -3.07 -2.4 -1.13 -1.04 -0.27 0.21 2.4 -3.88 -3.98 1.08 0.62 -0.64 0.85
0.46 -0.98 -1.79 -2.33 -1.39 -1.48 -1.1 -0.26 -0.67 1.96 -0.16 -0.32 0.59 0.48 -0.09 0.61
0.47 -1.34 -3.36 -3.9 -2.52 -2.27 -1.17 0.91 1.19 1.35 -0.19 -0.52 0.26 0.32 -0.03 0.61
0.45 -1.3 -1.49 -1.62 -1.08 -0.22 0.11 0.36 0.48 1.18 -0.03 -0.84 0.38 -0.04 0.18 0.32
-1.1 0.46 -5.91 -5.2 -5.41 -7.71 -2.72 0.95 1.94 2.74 -2.2 -3.34 -1.34 -1.48 -3.94 -1.52
0.08 0.36 -4.09 -4.06 -2.41 -4.15 -2.71 0.76 1.07 3.11 -1.42 -2.1 -4.76 -4.27 -6.78 -5.3
0.38 -0.46 -2.96 -5.18 -2.47 -2.55 -1.65 0.55 0.43 2.04 -2.11 -2.03 0.63 0.86 0.23 0.29
0.73 -0.33 -2.81 -3.13 -2.32 -2.37 -1.24 0.18 1.15 1.4 -0.86 -1.72 0.77 0.35 -0.28 0.87
0.49 -0.47 -2.22 -2.08 -1.65 -0.98 -0.88 0.3 1.19 1.62 0.4 -0.05 -0.17 -0.52 -0.77 -0.01
1.03 -0.52 -4.99 -4.34 -3.54 -3.22 -0.7 -0.37 1.52 1.41 -0.46 -1.16 0.31 0.14 -0.1 0.69
1.43 -0.36 -3.27 -3.28 -3.35 -2.72 -2.33 1.08 1.19 1.83 -2.51 -2.81 0.08 -0.24 -1.4 0.41
1.18 0.61 - -3.15 - - -2.17 1.29 1.43 1.97 -1.8 -2.91 -0.0 -0.36 - -0.71
0.97 0.38 -1.59 -1.14 -0.71 -1.39 -1.29 -0.21 0.2 2.13 -1.85 -1.54 -0.19 -0.18 -1.37 0.49
-1.75 -3.14 - - -9.22 -7.06 - -3.09 -1.08 -1.21 - - 2.27 1.76 0.85 2.18
-0.23 -0.58 -2.69 -3.28 -1.75 -1.26 -1.9 0.63 1.3 2.35 -1.34 -1.62 -0.39 -0.3 -0.16 -0.12
0.11 -0.76 -3.26 -3.34 -3.22 -1.68 -0.31 0.58 1.24 2.67 -1.38 -2.05 -0.95 -1.53 -2.05 -0.11
-1.12 -0.88 - - - - - -1.15 -0.71 0.35 - - 0.61 1.1 3.17 -
0.71 -0.8 -4.96 -2.95 -2.2 -2.23 0.14 -0.39 0.94 1.93 -0.92 -2.4 0.71 0.1 -1.23 0.81
1.28 -0.16 -2.38 -1.85 -1.84 -1.63 -0.96 0.66 1.3 2.05 -1.36 -1.6 -1.05 -0.86 -1.07 -0.58
1.13 -1.47 -1.48 -1.32 -1.47 -0.42 -1.3 0.52 1.07 1.93 -0.95 -2.02 0.01 -0.82 -0.98 -0.03
0.31 -0.56 -3.91 -3.9 -3.78 -2.88 -2.01 0.52 1.5 2.44 -1.66 -2.77 -0.36 -0.16 -0.48 -0.1
-0.46 -0.68 -2.73 -2.78 -1.26 -2.55 -1.38 -0.18 1.27 2.17 -1.33 -1.96 0.47 0.23 -0.05 0.49
0.81 -0.62 -2.05 -2.53 -1.78 -1.3 -0.54 0.39 0.76 1.3 -0.79 -0.75 0.26 0.25 0.22 0.68
0.07 -0.1 -5.38 -7.05 -6.66 -5.25 -1.09 0.03 1.16 2.22 -1.15 -1.14 0.44 0.39 -0.58 0.43
0.29 -0.05 -3.32 -2.95 -3.24 -4.31 -1.89 0.05 0.54 1.79 -2.02 - 1.14 0.27 - 1.83
-0.67 -4.69 - - -3.95 -5.1 -0.5 -0.49 0.27 0.75 -3.39 - 1.92 0.06 0.13 2.3
0.44 0.17 -1.31 -1.45 -0.27 -0.53 -0.78 -0.24 0.84 1.44 -1.2 -1.01 0.23 -0.01 -0.34 0.5
0.66 0.59 -1.63 -1.74 -1.22 -0.99 -0.19 0.69 0.88 1.3 -1.03 -0.92 -0.19 -0.09 -0.13 -0.28
0.03 0.7 -4.26 -4.71 -3.61 -2.63 -4.06 0.63 1.88 2.78 -5.18 -4.96 -2.24 -3.45 -2.15 -1.89

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.