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Heatmap: Cluster_193 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.93 0.0 0.0 0.0 0.0 0.27 0.04 0.97 2.39 2.57 0.11 0.0 0.77 0.0 0.0 0.24
7.34 7.58 2.26 2.59 2.33 2.88 7.83 13.05 18.5 38.63 4.57 3.15 10.91 9.35 4.8 15.53
4.32 2.38 0.24 0.96 0.75 1.36 0.3 0.81 9.23 8.85 1.0 0.85 1.58 1.9 1.75 1.64
9.63 0.99 0.67 0.96 1.23 1.36 1.57 7.15 4.82 23.63 1.26 2.03 10.01 8.16 7.3 11.61
0.67 0.0 0.0 0.0 0.0 0.0 0.0 0.26 0.0 1.93 0.0 0.0 0.0 0.0 0.0 0.0
10.13 5.43 1.16 0.57 0.58 1.85 4.26 10.53 10.8 12.78 1.46 2.3 5.69 6.14 7.89 9.83
0.0 2.95 0.04 0.05 0.09 0.0 0.1 4.79 7.02 11.32 0.0 0.0 0.0 0.0 0.0 0.0
97.64 67.35 13.7 19.1 20.57 17.99 52.67 101.03 99.87 116.35 36.98 37.25 31.69 40.38 39.76 27.54
5.05 0.34 0.53 0.52 0.03 0.19 1.42 7.08 11.41 10.18 2.92 0.79 8.16 5.58 3.24 6.9
13.65 1.58 2.37 0.96 1.68 2.03 7.54 11.15 24.32 20.24 2.79 1.42 9.75 7.92 6.22 8.99
9.98 11.02 2.18 0.52 1.75 2.2 2.84 7.93 10.13 19.19 1.99 0.78 18.83 21.42 8.83 10.93
8.23 2.92 2.02 0.82 1.56 0.96 2.0 5.55 11.2 20.13 2.83 3.02 13.9 11.41 10.55 9.85
9.87 2.97 2.95 1.75 4.65 6.41 7.52 9.88 13.95 17.36 7.4 3.95 8.33 6.68 5.78 9.7
52.89 23.07 3.16 2.18 3.09 2.76 21.84 47.79 57.38 63.45 17.54 19.43 43.58 36.56 17.34 48.76
4.31 0.56 0.23 0.49 1.75 1.65 1.96 3.97 8.07 13.81 1.6 1.06 0.61 1.78 0.48 1.35
5.1 2.45 1.2 0.2 0.9 0.8 0.93 1.6 8.46 5.74 1.36 1.82 4.41 4.46 3.28 5.8
8.18 2.06 0.73 0.23 0.25 1.35 1.93 6.18 4.19 18.37 3.52 2.45 12.41 8.63 10.51 8.39
55.24 38.76 7.15 6.01 8.77 1.15 65.97 53.82 114.5 162.72 30.77 12.69 23.12 12.94 8.33 19.38
63.56 32.13 16.84 27.49 12.22 20.7 43.4 34.08 95.88 130.52 37.2 30.14 14.6 11.26 12.33 15.4
12.34 2.85 1.57 2.29 2.63 3.75 1.73 9.77 20.58 20.29 3.16 1.72 5.49 5.46 4.59 8.51
28.81 16.71 19.21 13.48 18.38 8.85 5.84 12.4 31.02 67.97 9.69 13.46 10.35 7.29 8.21 14.99
36.86 19.17 7.98 6.11 9.64 10.77 21.32 34.73 54.58 66.41 28.56 24.86 26.0 20.83 20.88 26.66
33.46 18.22 4.31 3.0 6.03 8.38 12.02 23.64 26.93 59.55 19.37 14.21 24.86 16.98 14.68 23.08
30.66 4.51 2.42 2.59 1.67 3.21 7.71 21.19 19.43 37.15 13.05 9.43 17.98 16.44 9.7 20.66
13.65 21.57 2.28 3.62 0.5 0.22 3.83 14.21 38.81 166.41 5.73 2.6 14.58 9.63 5.06 10.92
33.18 5.59 6.42 2.92 5.81 6.16 16.1 32.56 31.62 80.17 12.86 6.2 60.02 52.07 42.59 38.95
1.14 0.55 0.38 0.13 0.2 0.58 0.33 0.91 0.7 3.71 0.72 0.45 3.51 2.45 1.25 4.44
5.28 4.37 0.21 0.2 0.29 0.97 0.26 11.33 18.98 33.98 0.25 0.23 6.09 9.19 4.63 6.31
77.21 41.64 13.77 9.57 11.34 10.38 24.07 46.39 110.21 151.59 24.48 19.56 44.64 45.83 35.01 47.53
5.42 2.47 0.19 0.43 0.68 0.73 1.12 3.13 5.2 6.83 3.07 1.66 9.18 10.47 9.26 11.56
15.15 1.9 1.62 1.29 2.2 4.6 4.69 8.72 14.01 21.29 4.01 1.74 18.57 12.33 8.77 18.63
26.15 20.81 4.43 2.87 5.47 4.28 14.05 23.31 18.45 29.15 8.2 8.13 23.23 15.85 12.57 19.75
95.19 57.63 16.7 19.25 24.65 24.9 18.14 69.99 90.76 107.64 28.92 34.38 34.65 36.57 31.41 43.15
5.49 1.85 0.3 0.16 0.64 0.52 2.33 10.75 8.62 38.11 2.99 1.26 11.59 6.62 3.73 8.37
1.47 0.17 0.0 0.0 0.0 0.02 0.14 0.55 2.65 2.55 0.0 0.0 1.42 0.33 0.13 0.83
9.41 8.34 0.59 0.88 1.18 1.73 1.73 16.99 13.87 23.63 1.5 0.63 18.26 11.29 7.16 15.52
2.62 2.61 0.97 0.82 1.72 1.81 5.28 3.77 4.89 12.36 3.73 2.32 6.46 4.23 4.72 5.49
5.41 5.85 2.37 2.21 2.84 3.51 3.87 3.82 6.03 14.38 3.19 2.44 4.28 2.97 3.12 2.69
7.47 2.64 0.44 0.31 0.94 0.45 1.39 10.86 19.14 38.9 1.24 1.62 8.78 8.3 7.63 11.54
15.62 16.79 2.28 1.42 4.69 4.11 31.91 24.38 35.36 100.32 7.37 6.9 15.6 12.12 7.8 25.85
26.84 19.0 2.62 2.4 4.68 4.8 2.97 10.1 24.46 33.45 2.12 3.07 14.2 16.1 11.81 20.81
5.18 1.01 0.31 0.26 0.56 0.88 0.86 3.26 3.32 5.26 1.16 0.7 3.21 1.7 1.05 1.83
55.24 17.36 6.35 5.97 7.29 10.33 18.18 48.1 144.85 261.19 21.71 16.4 17.96 18.05 15.91 24.85
17.4 4.84 1.61 1.39 2.25 2.39 5.51 6.08 30.78 33.35 2.72 1.63 14.69 10.74 8.05 18.8
31.54 10.76 5.05 5.01 6.59 4.97 12.62 31.08 35.88 46.41 15.17 12.74 16.32 12.31 13.2 16.86
18.5 5.73 4.92 4.8 9.41 9.6 10.35 15.18 18.98 23.63 6.2 4.08 13.75 9.22 6.61 10.75
8.5 2.11 2.03 1.22 1.95 4.69 5.0 8.5 11.9 54.16 0.7 0.65 21.75 15.8 6.58 18.54
13.5 4.98 2.84 1.95 3.75 3.51 4.58 8.2 6.19 38.3 8.8 7.88 14.78 13.72 9.22 15.0
6.66 1.89 0.47 0.32 0.84 1.0 2.14 9.03 10.94 12.26 4.21 3.35 5.77 6.0 4.72 7.35
71.55 21.29 18.77 17.06 24.79 45.17 56.72 67.35 73.36 119.33 51.37 29.43 68.39 51.04 59.41 65.82
17.74 52.23 0.63 1.03 0.9 0.18 5.78 73.26 145.63 254.69 8.3 3.75 15.01 13.65 2.48 13.26
18.97 23.14 1.06 1.08 3.39 1.01 2.76 30.56 37.71 155.16 6.72 4.21 0.67 0.93 0.16 0.46
37.92 21.23 3.75 0.8 5.26 4.98 9.28 42.86 39.41 119.64 6.75 7.13 45.04 52.97 34.2 35.66
23.4 11.22 2.02 1.62 2.84 2.74 6.0 16.07 31.41 37.38 7.78 4.29 24.07 18.01 11.68 25.92
26.76 13.73 4.07 4.49 6.05 9.63 10.31 23.48 43.49 58.62 25.02 18.38 16.93 13.29 11.16 18.92
20.25 6.92 0.31 0.49 0.85 1.07 6.09 7.66 28.5 26.4 7.23 4.44 12.32 10.91 9.22 16.02
35.73 10.33 1.38 1.37 1.3 2.01 2.63 28.06 30.22 47.01 2.34 1.89 14.05 11.22 5.02 17.67
1.94 1.31 0.0 0.1 0.0 0.0 0.19 2.09 2.31 3.36 0.25 0.11 0.85 0.67 0.0 0.52
12.59 8.35 2.13 2.92 3.93 2.45 2.63 5.56 7.41 28.15 1.78 2.21 5.63 5.66 2.49 9.04
7.5 2.86 0.0 0.0 0.04 0.19 0.0 2.98 11.94 10.94 0.0 0.0 122.15 85.69 45.5 114.53
3.54 2.78 0.64 0.43 1.23 1.74 1.11 6.45 10.25 21.2 1.65 1.35 3.18 3.36 3.72 3.82
6.44 3.51 0.62 0.59 0.64 1.86 4.79 8.93 14.06 38.03 2.3 1.44 3.08 2.06 1.44 5.52
0.06 0.07 0.0 0.0 0.0 0.0 0.0 0.06 0.07 0.16 0.0 0.0 0.19 0.26 1.1 0.0
9.62 3.38 0.19 0.76 1.28 1.25 6.46 4.49 11.3 22.35 3.12 1.11 9.64 6.3 2.51 10.28
60.52 22.42 4.78 6.94 6.96 8.08 12.86 39.48 61.5 103.69 9.72 8.22 12.1 13.78 11.89 16.66
15.23 2.5 2.48 2.77 2.5 5.18 2.82 9.94 14.56 26.46 3.58 1.71 7.0 3.93 3.52 6.8
8.35 4.55 0.45 0.45 0.49 0.91 1.67 9.63 19.02 36.51 2.12 0.99 5.23 6.0 4.81 6.27
7.68 6.61 1.59 1.54 4.43 1.81 4.07 9.36 25.53 47.54 4.21 2.73 14.66 12.43 10.25 14.9
105.12 39.02 14.46 10.35 17.4 24.32 41.29 78.61 101.67 147.35 34.71 35.59 71.62 71.47 69.93 95.67
9.38 8.29 0.21 0.07 0.09 0.23 4.19 9.09 19.88 41.4 4.02 4.06 12.1 11.65 5.95 12.03
5.87 4.63 0.48 0.62 0.51 0.24 1.3 4.95 6.95 16.6 1.18 0.0 10.59 5.78 0.0 17.01
1.29 0.08 0.0 0.0 0.13 0.06 1.46 1.46 2.49 3.46 0.2 0.0 7.81 2.15 2.26 10.13
13.67 11.33 4.07 3.69 8.34 6.98 5.86 8.51 18.07 27.39 4.37 5.01 11.82 9.99 7.96 14.27
117.22 111.93 24.01 22.21 32.01 37.57 65.07 119.63 137.33 183.24 36.33 39.38 65.13 70.12 67.93 61.31
9.4 14.89 0.48 0.35 0.75 1.49 0.55 14.18 33.85 63.15 0.25 0.3 1.95 0.84 2.06 2.48

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)