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Heatmap: Cluster_186 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-3.92 -3.85 2.06 2.23 0.55 1.94 -0.97 -3.41 -4.0 -3.12 -1.12 -1.12 -10.04 -10.55 - -8.84
-2.84 - 1.78 2.28 0.07 2.63 - -7.11 -2.26 -4.79 - -4.86 - -4.63 - -
-1.2 -2.35 1.82 2.08 0.38 1.87 -3.51 -5.4 -6.33 -5.94 0.42 -0.28 -2.83 -5.82 -8.14 -2.51
-0.97 -1.8 0.38 0.97 0.32 0.95 0.05 0.01 -0.33 -0.28 0.35 -0.13 -0.18 -0.48 -0.96 -0.35
-0.6 -0.21 1.08 1.34 0.36 1.34 0.16 -0.82 -0.66 -0.9 -0.15 -0.06 -1.65 -1.88 -1.48 -1.51
-1.01 -1.84 0.95 1.48 0.29 1.52 -0.13 -1.62 -1.02 -0.66 0.24 -0.17 -0.75 -1.27 -1.29 -0.85
-3.82 0.14 1.07 2.4 -1.12 2.45 - -2.53 -0.33 -3.44 -3.41 -1.93 - -3.24 - -
0.12 -1.7 0.91 1.01 0.36 0.93 -0.35 -1.67 -0.83 -0.08 0.39 0.39 -0.73 -1.01 -1.34 -0.34
-3.62 -3.23 1.34 2.03 0.19 1.75 -1.84 -1.38 -0.52 0.17 0.16 0.08 -7.81 -8.9 -5.25 -6.35
-0.3 -2.51 0.78 0.89 -0.12 0.69 -1.78 -0.73 -1.2 -1.36 -2.91 -0.85 -0.07 -0.29 0.32 1.8
0.48 -1.78 1.07 1.54 0.29 1.36 -0.77 -1.58 -2.07 -2.55 -0.58 -0.41 -0.48 -0.36 -1.43 -0.15
-2.73 - 1.75 2.4 0.64 1.93 0.53 -3.9 -4.39 - -4.29 -2.81 - - - -3.16
-5.04 -5.24 2.1 2.21 -0.05 2.35 - - -3.73 -3.31 -0.86 -2.02 - - - -
0.64 -0.68 0.97 1.32 0.52 1.24 -0.51 -1.47 -1.09 -0.77 -0.08 0.34 -1.56 -2.1 -1.73 -1.4
-2.65 -0.51 1.04 2.3 -0.87 1.88 -3.47 -2.42 - - -1.79 -1.63 -1.89 -1.99 0.09 0.57
-2.04 -1.15 0.19 0.5 -1.05 -0.05 -2.43 -1.14 - - -2.85 -3.3 1.41 1.27 1.62 1.2
- - 1.54 1.79 -0.47 1.83 -1.97 -4.62 - -2.81 -1.11 -1.61 0.28 -0.14 -0.4 0.31
- -5.18 1.83 2.41 -0.78 2.38 - -0.9 - - -3.94 -4.04 -1.7 -1.47 - -
-0.31 -2.3 1.14 1.7 0.34 1.41 -0.59 -1.8 -3.05 -2.59 -0.0 -0.32 -0.43 -0.79 -1.02 -0.4
-3.35 - 1.59 2.69 0.94 2.01 - - - - -1.6 -4.29 - -3.04 - -
- - 2.2 1.85 1.32 2.01 -1.57 -5.08 -2.08 -2.03 -3.99 - -1.8 -3.9 - -
0.41 -0.22 0.64 0.96 0.27 1.0 -0.02 -0.23 -0.37 -0.82 0.55 0.05 -1.18 -1.49 -3.19 -0.9
-2.75 -1.96 1.44 1.52 0.43 2.0 -0.98 -0.06 -1.59 -0.78 0.05 0.2 -5.03 -6.04 -5.25 -4.51
-0.45 -1.24 0.64 1.32 -0.18 1.22 -1.38 -0.86 -2.04 -0.95 0.34 -0.2 0.29 -0.53 -1.12 0.46
-4.88 - 2.13 2.28 -1.5 2.63 - - -2.94 - - -4.53 - - - -
-10.32 -10.07 2.2 2.55 0.07 1.99 -2.84 -8.94 -6.17 -7.59 -2.94 -1.87 - - - -
- - 1.66 1.83 -0.47 2.71 -3.6 -0.65 -0.55 - -1.26 -2.36 - - - -
-8.31 -6.44 1.23 2.79 0.96 2.15 -6.88 -5.32 -3.86 -3.75 -3.92 -3.6 - - - -
-1.64 -3.41 1.52 1.99 -0.09 2.12 -1.89 - - - - - - - 1.67 -
-0.09 - 1.58 2.14 0.8 2.26 - -3.83 -1.49 -0.44 - - - - - -
-1.88 -2.48 1.27 2.02 0.08 1.84 -0.41 -0.73 -4.6 -5.35 0.05 -0.3 -1.54 -2.83 -3.09 -0.86
- - 1.59 2.51 0.01 2.16 -5.55 -7.09 -4.92 -3.18 -0.09 -0.48 - - - -
-2.49 - 2.03 1.93 -0.26 1.33 -0.39 0.25 -0.57 - -1.06 -0.58 - -1.9 - -0.93
-5.46 -2.43 1.29 1.87 0.1 1.98 -0.75 -1.03 -0.04 -1.86 0.6 -0.58 -6.25 -5.26 -4.62 -3.65
- -1.98 1.83 2.37 0.14 0.97 - -1.94 -2.89 0.34 -2.8 - - -2.64 1.02 -
-0.53 -1.75 1.38 1.92 0.16 1.5 -0.93 -1.7 -0.72 -0.44 -0.5 -0.99 -1.37 -1.8 -2.09 -1.43
-5.39 -0.43 1.11 2.2 -0.35 1.49 -3.58 -0.93 0.01 0.13 0.36 -0.17 - -6.18 - -
- - 1.95 2.61 0.67 1.94 -3.24 -5.09 - - -3.64 -1.87 - - -3.0 -
- - 2.01 2.42 0.85 2.22 -2.66 -8.48 - - - -5.2 - - - -
-4.57 - 1.33 1.84 1.0 2.17 0.08 -1.97 -1.58 -0.73 -0.75 -1.73 -3.69 -4.15 -4.68 -4.01
- -8.1 1.86 2.12 1.04 2.07 -3.9 -3.55 -2.77 -5.33 -0.45 -1.08 -5.64 -2.69 -4.66 -
-2.33 - 1.89 2.72 -1.31 2.0 - - - - - 0.16 - - - -
-1.85 -3.31 0.91 1.29 -0.39 1.6 -4.43 -1.92 -11.45 -8.39 -4.07 -2.66 0.89 0.13 1.39 0.47
- - 1.68 2.11 -1.02 2.71 -0.96 -4.22 -4.18 - - - - -2.65 -0.85 -2.95
0.63 -0.79 1.26 1.5 0.65 1.51 -1.49 -1.99 -0.28 -0.77 -0.3 -0.31 -2.73 -2.69 -2.91 -2.58
- - 0.79 1.93 0.93 1.56 -1.88 -2.05 - - -1.54 - - 0.61 1.68 -
-1.16 -1.64 0.7 1.39 0.16 1.19 -0.42 -0.64 -0.39 0.14 0.57 -0.09 -0.64 -1.13 -1.77 -0.94
- - 1.33 2.42 1.82 2.19 - - - - - - - - - -
- - 2.24 3.16 - 1.21 - - - - - - - - - -
-7.79 - 1.58 2.05 0.92 2.57 -1.39 -2.36 -3.57 -5.32 -2.7 -2.39 - - - -
-1.92 -1.83 1.15 2.34 -0.05 1.78 -2.96 -3.89 -0.79 -2.21 -0.34 -0.53 -2.01 -1.58 -2.62 -0.78
-2.77 -3.92 1.2 2.71 0.57 1.82 -3.56 -6.18 -4.84 -4.79 -2.28 -2.68 -0.99 -1.14 - -1.24
-1.61 -1.67 0.86 2.01 0.97 1.89 -0.38 -1.15 -4.53 -3.51 -2.62 -2.13 -0.8 -1.5 -0.48 -1.12
0.85 - 0.99 2.24 0.62 2.29 -1.77 -3.29 - - -3.43 -1.54 -2.18 - - -
- - 1.75 2.71 0.5 1.61 -0.62 -3.62 - - -1.26 - - -1.13 - -
-3.96 -5.41 2.35 2.53 -0.87 1.71 -1.64 -3.63 -4.28 -4.75 -2.99 -4.5 -3.92 -4.86 -1.35 -4.03
- - 1.09 2.29 1.27 2.1 -0.42 0.2 - - -3.52 -3.63 - -4.43 - -2.46
- - 1.28 2.7 2.16 1.37 - - - - - - - - - -
- - 0.81 2.31 0.62 1.69 -1.33 -1.35 - - - - 0.4 - - 1.28
- - 1.61 2.64 1.06 1.97 - - - - - - -0.48 - - -
- -5.89 2.27 1.96 1.38 2.08 -6.51 -6.34 -5.23 -4.18 -2.23 -4.25 - - -3.95 -
- - 2.0 2.54 0.9 2.0 -3.46 -7.05 -4.77 - - -4.78 -3.46 - - -3.59
-2.99 -3.23 -1.24 0.72 -0.8 -0.2 -3.2 -3.7 -4.27 -2.53 - -4.04 1.53 2.06 1.8 0.31
- - 1.64 2.05 0.65 2.27 -3.35 -4.82 -2.76 -2.32 0.0 -0.26 - - -4.74 -
-2.48 -1.22 1.61 1.79 -1.58 2.33 -0.06 -0.55 -1.15 -1.09 -0.06 - - - - -
-2.88 -2.0 0.7 1.42 0.49 1.38 -0.14 -0.52 -0.62 -1.8 0.68 0.08 -1.66 -1.66 0.34 -2.37
-4.78 - 1.72 1.86 -0.67 1.84 -3.83 - - -5.7 -1.14 -0.64 -0.16 -0.81 -0.63 0.63
-3.03 0.89 2.1 1.86 1.21 1.37 - -1.08 - - -1.35 -1.46 - - - -
- - 2.27 2.56 -0.19 1.72 -0.29 -8.61 - - -3.95 -2.25 - - - -
-4.61 -4.36 1.71 2.21 0.87 1.36 0.65 -4.13 -1.0 -2.31 -0.9 -1.54 -3.38 -3.25 -3.99 -2.76
-1.58 -3.95 2.04 2.0 0.77 1.9 -0.02 -5.94 - - -1.54 -2.65 - -2.44 - -1.47
0.32 -4.02 2.06 2.27 0.25 1.36 - - -2.88 - -2.79 - - - 0.43 -1.67
-3.63 - -0.47 -0.53 -1.67 -0.56 -3.2 -3.39 -4.53 - -3.44 -4.54 2.41 1.45 -1.23 2.22
- - 1.79 1.81 1.09 2.74 -3.04 -7.67 - - -3.21 - - - - -
- 0.05 2.03 2.6 1.03 1.12 - - - - -0.77 - - - - -
- - 1.63 2.37 1.46 2.17 -2.59 -4.22 -3.78 -5.13 -4.68 -3.62 - - -4.46 -
- - 2.13 2.19 1.52 2.06 - -5.23 - - - - - - - -
- -3.78 2.0 2.5 0.99 2.05 - -5.76 - - -2.93 - - - - -
-4.65 -1.93 0.84 1.69 0.31 1.63 -1.37 -3.12 -4.3 -2.24 -0.03 0.08 -0.63 -0.05 -0.98 0.51
-1.87 -3.47 1.51 2.1 0.9 1.44 -0.78 -1.47 -1.85 -1.89 -0.44 -0.52 -1.93 -2.25 -2.09 -1.73
- - 2.06 2.15 0.98 2.44 - - -7.47 - - -7.48 - -7.3 - -
-4.91 -3.27 1.8 2.09 1.16 1.73 -2.94 -2.58 -2.11 -0.26 -0.94 -2.4 -3.56 -2.56 -2.28 -4.68
-3.01 -1.17 1.43 1.82 0.95 1.83 -1.07 -0.3 -1.67 -1.61 -1.8 -2.49 -0.32 -3.23 -2.16 -2.25
- - 0.31 1.55 -1.14 1.46 -1.1 -2.0 -3.02 -2.96 - -0.44 0.32 2.35 - -0.81
- - 2.05 2.0 0.84 2.46 -6.41 -8.62 -5.82 -4.68 -1.72 -2.49 - - - -
-0.41 -1.05 1.26 2.22 0.27 1.79 -0.33 -1.03 -1.03 -1.97 -0.93 -1.04 - - - -
-1.95 - 1.46 2.44 1.88 1.58 - -3.37 - - - - - -1.89 - -0.92
- - 0.78 3.11 0.33 1.97 - -1.13 - - - - - - - -
- - 2.51 1.79 1.44 1.61 -0.58 -8.08 - - -2.58 -2.56 - - -3.55 -
- - 2.55 2.32 0.88 1.58 -2.2 -8.12 - -8.18 -5.14 -4.79 - - -4.91 -7.0
-2.18 -1.54 1.73 2.24 0.1 1.55 -1.81 -3.47 -4.17 - -1.75 -1.37 - -1.59 0.48 -0.94
- - 1.82 2.16 1.59 2.32 - - - - - - - - - -
- - 1.98 2.28 1.1 2.27 - - - - - - - -2.12 - -
- - 2.28 2.32 -1.06 2.5 -8.54 -7.96 - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.