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Heatmap: Cluster_186 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
13.12 13.76 825.72 932.61 290.24 759.71 101.49 18.63 12.43 22.8 91.04 91.0 0.19 0.13 0.0 0.43
0.4 0.0 9.78 13.9 2.99 17.67 0.0 0.02 0.6 0.1 0.0 0.1 0.0 0.12 0.0 0.0
141.84 64.02 1152.15 1376.98 424.53 1192.38 28.62 7.7 4.04 5.31 434.15 268.07 45.67 5.75 1.15 57.24
18.18 10.24 46.3 69.88 44.51 68.6 36.9 35.85 28.29 29.28 45.44 32.46 31.37 25.52 18.34 27.85
26.43 34.55 84.67 100.97 51.24 101.21 44.57 22.6 25.24 21.43 35.89 38.39 12.69 10.86 14.32 14.06
25.46 14.38 98.87 142.95 62.72 147.55 47.01 16.74 25.38 32.5 60.8 45.59 30.62 21.27 20.95 28.4
0.02 0.27 0.51 1.29 0.11 1.34 0.0 0.04 0.19 0.02 0.02 0.06 0.0 0.03 0.0 0.0
26.09 7.39 45.27 48.41 30.88 45.68 18.88 7.53 13.52 22.68 31.57 31.52 14.53 11.94 9.52 18.99
1.11 1.45 34.31 55.25 15.41 45.52 3.78 5.2 9.49 15.26 15.14 14.36 0.06 0.03 0.36 0.17
0.4 0.09 0.86 0.92 0.46 0.8 0.14 0.3 0.22 0.19 0.07 0.28 0.47 0.41 0.62 1.73
3.92 0.82 5.91 8.18 3.44 7.25 1.65 0.95 0.67 0.48 1.88 2.12 2.02 2.19 1.05 2.54
0.1 0.0 2.33 3.66 1.08 2.64 1.0 0.05 0.03 0.0 0.04 0.1 0.0 0.0 0.0 0.08
0.38 0.34 54.06 58.38 12.21 64.51 0.0 0.0 0.96 1.28 6.99 3.11 0.0 0.0 0.0 0.0
47.35 19.07 59.5 75.99 43.69 71.89 21.39 10.98 14.36 17.82 28.74 38.44 10.36 7.11 9.16 11.56
0.28 1.24 3.63 8.69 0.97 6.49 0.16 0.33 0.0 0.0 0.51 0.57 0.48 0.45 1.88 2.63
33.7 62.51 157.86 195.78 66.65 133.68 25.72 62.7 0.0 0.0 19.18 14.03 366.85 333.19 424.17 316.93
0.0 0.0 1.93 2.29 0.48 2.35 0.17 0.03 0.0 0.09 0.31 0.22 0.8 0.6 0.5 0.82
0.0 0.03 3.62 5.4 0.59 5.28 0.0 0.55 0.0 0.0 0.07 0.06 0.31 0.37 0.0 0.0
22.88 5.77 62.83 92.34 35.96 75.7 18.94 8.15 3.43 4.73 28.34 22.71 21.07 16.41 14.05 21.58
0.12 0.0 3.82 8.19 2.45 5.11 0.0 0.0 0.0 0.0 0.42 0.07 0.0 0.15 0.0 0.0
0.0 0.0 12.72 9.97 6.89 11.1 0.93 0.08 0.65 0.68 0.17 0.0 0.79 0.19 0.0 0.0
27.34 17.65 32.0 40.03 24.9 41.07 20.26 17.51 15.91 11.67 30.17 21.3 9.06 7.31 2.25 11.0
3.44 5.94 62.67 66.16 31.01 92.18 11.68 22.07 7.69 13.41 23.82 26.42 0.71 0.35 0.61 1.01
54.6 31.67 116.29 186.48 65.99 174.69 28.72 41.21 18.2 38.85 94.62 65.23 91.31 51.63 34.42 102.94
0.04 0.0 4.57 5.1 0.37 6.5 0.0 0.0 0.14 0.0 0.0 0.05 0.0 0.0 0.0 0.0
0.03 0.03 165.4 210.86 37.82 143.06 5.03 0.07 0.5 0.19 4.7 9.89 0.0 0.0 0.0 0.0
0.0 0.0 1.46 1.65 0.33 3.02 0.04 0.3 0.32 0.0 0.19 0.09 0.0 0.0 0.0 0.0
1.75 6.38 1304.21 3832.51 1081.18 2470.79 4.71 13.85 38.2 41.11 36.69 45.75 0.0 0.0 0.0 0.0
0.13 0.04 1.15 1.59 0.37 1.74 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.27 0.0
0.51 0.0 1.63 2.4 0.95 2.61 0.0 0.04 0.19 0.4 0.0 0.0 0.0 0.0 0.0 0.0
1.59 1.05 14.15 23.79 6.2 20.95 4.39 3.53 0.24 0.14 6.06 4.75 2.02 0.82 0.69 3.22
0.0 0.0 53.87 101.4 17.97 79.59 0.38 0.13 0.59 1.97 16.72 12.77 0.0 0.0 0.0 0.0
0.02 0.0 0.53 0.49 0.11 0.32 0.1 0.15 0.09 0.0 0.06 0.09 0.0 0.03 0.0 0.07
0.89 7.21 95.06 142.06 41.81 154.26 23.14 19.09 37.98 10.76 59.21 26.02 0.51 1.02 1.59 3.11
0.0 0.07 0.92 1.33 0.28 0.51 0.0 0.07 0.03 0.33 0.04 0.0 0.0 0.04 0.52 0.0
34.89 15.06 131.36 191.52 56.45 142.88 26.53 15.52 30.66 37.24 35.7 25.51 19.53 14.53 11.89 18.72
0.42 13.2 38.29 81.32 13.89 49.94 1.48 9.31 17.81 19.35 22.75 15.71 0.0 0.24 0.0 0.0
0.0 0.0 8.0 12.58 3.28 7.93 0.22 0.06 0.0 0.0 0.17 0.57 0.0 0.0 0.26 0.0
0.0 0.0 17.58 23.36 7.88 20.36 0.69 0.01 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0
1.33 0.0 79.06 112.51 62.74 141.31 33.36 8.03 10.55 18.94 18.72 9.49 2.44 1.77 1.23 1.95
0.0 0.05 47.67 57.33 27.11 55.4 0.88 1.12 1.93 0.33 9.66 6.23 0.26 2.04 0.52 0.0
0.05 0.0 0.85 1.5 0.09 0.92 0.0 0.0 0.0 0.0 0.0 0.26 0.0 0.0 0.0 0.0
39.84 14.53 270.57 352.31 109.86 435.73 6.66 37.95 0.05 0.43 8.54 22.72 265.41 157.29 377.71 199.67
0.0 0.0 1.3 1.74 0.2 2.64 0.21 0.02 0.02 0.0 0.0 0.0 0.0 0.06 0.22 0.05
78.17 29.17 120.79 143.34 79.09 143.67 17.94 12.76 41.67 29.55 40.95 40.8 7.64 7.8 6.73 8.46
0.0 0.0 0.2 0.45 0.22 0.35 0.03 0.03 0.0 0.0 0.04 0.0 0.0 0.18 0.38 0.0
6.19 4.45 22.57 36.28 15.43 31.59 10.35 8.87 10.55 15.26 20.53 13.02 8.9 6.35 4.06 7.2
0.0 0.0 16.91 36.03 23.8 30.72 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.06 0.12 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.03 0.0 18.42 25.41 11.6 36.49 2.35 1.2 0.52 0.15 0.95 1.17 0.0 0.0 0.0 0.0
1.22 1.29 10.21 23.28 4.44 15.82 0.59 0.31 2.66 1.0 3.65 3.19 1.15 1.55 0.75 2.69
1.73 0.78 27.16 77.53 17.6 41.89 1.0 0.16 0.41 0.43 2.43 1.85 5.97 5.35 0.0 5.02
11.87 11.42 65.85 145.89 70.74 134.63 27.93 16.37 1.57 3.18 5.9 8.26 20.82 12.78 25.91 16.62
0.81 0.0 0.9 2.12 0.69 2.21 0.13 0.05 0.0 0.0 0.04 0.16 0.1 0.0 0.0 0.0
0.0 0.0 0.78 1.52 0.33 0.71 0.15 0.02 0.0 0.0 0.1 0.0 0.0 0.11 0.0 0.0
2.23 0.82 177.11 201.69 19.07 113.81 11.16 2.81 1.79 1.3 4.39 1.54 2.3 1.2 13.61 2.14
0.0 0.0 9.3 21.45 10.55 18.75 3.27 5.04 0.0 0.0 0.38 0.35 0.0 0.2 0.0 0.8
0.0 0.0 44.48 119.58 82.1 47.45 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.61 1.72 0.53 1.12 0.14 0.14 0.0 0.0 0.0 0.0 0.46 0.0 0.0 0.84
0.0 0.0 0.49 0.99 0.33 0.62 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0
0.0 0.14 40.4 32.49 21.81 35.28 0.09 0.1 0.22 0.46 1.78 0.44 0.0 0.0 0.54 0.0
0.0 0.0 12.08 17.61 5.65 12.09 0.28 0.02 0.11 0.0 0.0 0.11 0.27 0.0 0.0 0.25
0.24 0.2 0.82 3.17 1.11 1.67 0.21 0.15 0.1 0.33 0.0 0.12 5.58 8.02 6.71 2.4
0.0 0.0 53.13 70.8 26.89 82.48 1.68 0.6 2.52 3.42 17.12 14.23 0.0 0.0 0.64 0.0
0.01 0.02 0.16 0.18 0.02 0.26 0.05 0.04 0.02 0.02 0.05 0.0 0.0 0.0 0.0 0.0
0.63 1.16 7.6 12.48 6.56 12.17 4.24 3.25 3.03 1.34 7.47 4.92 1.48 1.47 5.9 0.9
0.07 0.0 6.29 6.92 1.2 6.85 0.13 0.0 0.0 0.04 0.87 1.23 1.71 1.09 1.24 2.97
0.06 0.92 2.14 1.81 1.15 1.29 0.0 0.24 0.0 0.0 0.2 0.18 0.0 0.0 0.0 0.0
0.0 0.0 57.59 70.21 10.46 39.3 9.76 0.03 0.0 0.0 0.77 2.5 0.0 0.0 0.0 0.0
0.51 0.61 40.82 57.51 22.86 31.94 19.62 0.71 6.22 2.51 6.69 4.3 1.2 1.31 0.79 1.84
0.32 0.06 3.92 3.84 1.63 3.57 0.94 0.02 0.0 0.0 0.33 0.15 0.0 0.18 0.0 0.34
0.52 0.03 1.75 2.01 0.5 1.08 0.0 0.0 0.06 0.0 0.06 0.0 0.0 0.0 0.56 0.13
0.15 0.0 1.34 1.28 0.58 1.26 0.2 0.18 0.08 0.0 0.17 0.08 9.84 5.07 0.79 8.66
0.0 0.0 16.26 16.47 10.04 31.42 0.57 0.02 0.0 0.0 0.51 0.0 0.0 0.0 0.0 0.0
0.0 0.06 0.25 0.37 0.12 0.13 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0
0.0 0.0 16.25 27.27 14.45 23.6 0.87 0.28 0.38 0.15 0.2 0.43 0.0 0.0 0.24 0.0
0.0 0.0 18.5 19.26 12.09 17.69 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.2 11.1 15.68 5.52 11.48 0.0 0.05 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.0
0.03 0.19 1.33 2.41 0.92 2.29 0.29 0.09 0.04 0.16 0.73 0.79 0.48 0.72 0.38 1.06
17.84 5.87 186.11 278.31 121.65 176.18 37.88 23.46 18.05 17.56 48.05 45.51 17.11 13.71 15.27 19.67
0.0 0.0 150.91 161.13 71.47 196.59 0.0 0.0 0.2 0.0 0.0 0.2 0.0 0.23 0.0 0.0
0.06 0.19 6.47 7.89 4.14 6.18 0.24 0.31 0.43 1.55 0.97 0.35 0.16 0.31 0.38 0.07
0.09 0.31 1.86 2.44 1.33 2.45 0.33 0.56 0.22 0.23 0.2 0.12 0.55 0.07 0.15 0.14
0.0 0.0 0.61 1.43 0.22 1.35 0.23 0.12 0.06 0.06 0.0 0.36 0.61 2.51 0.0 0.28
0.0 0.0 78.77 75.68 33.87 104.62 0.22 0.05 0.34 0.74 5.77 3.37 0.0 0.0 0.0 0.0
0.51 0.33 1.63 3.18 0.82 2.37 0.54 0.34 0.33 0.17 0.36 0.33 0.0 0.0 0.0 0.0
0.09 0.0 0.92 1.8 1.22 1.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.18
0.0 0.0 0.08 0.41 0.06 0.19 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 40.52 24.59 19.3 21.75 4.75 0.03 0.0 0.0 1.19 1.2 0.0 0.0 0.61 0.0
0.0 0.0 39.02 33.42 12.28 19.99 1.45 0.02 0.0 0.02 0.19 0.24 0.0 0.0 0.22 0.05
0.12 0.18 1.74 2.49 0.57 1.54 0.15 0.05 0.03 0.0 0.16 0.2 0.0 0.17 0.74 0.27
0.0 0.0 0.32 0.4 0.27 0.44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 2.76 3.38 1.49 3.35 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.0
0.0 0.0 70.81 73.15 7.03 82.92 0.04 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)