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Heatmap: Cluster_327 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.45 0.13 -1.12 -1.18 -0.93 -0.52 -0.58 -1.48 -5.63 -5.26 -1.32 0.14 1.5 1.08 0.38 1.38
0.83 -0.05 0.14 0.51 0.57 0.44 0.75 -0.61 -0.41 -0.16 0.17 -0.57 -0.65 -1.04 -1.3 -0.81
0.75 -0.6 0.97 -0.16 0.76 0.74 -1.59 -1.7 -2.61 -2.16 0.28 0.71 0.09 -0.82 -0.54 0.31
0.38 -1.2 0.05 0.5 0.16 0.65 0.03 -0.45 -0.48 -0.03 0.27 -0.45 0.29 -0.12 -0.77 0.03
0.21 -0.77 0.48 0.65 0.52 1.01 0.39 -0.93 -0.61 -0.75 0.69 0.31 -0.49 -1.39 -1.62 -1.0
-3.33 -2.31 0.24 1.22 2.0 -0.53 2.39 -4.25 -4.79 -2.73 -0.74 0.04 - - -1.47 -
0.01 -0.6 0.63 0.79 0.78 0.54 0.51 -0.67 -1.3 -0.81 0.25 -0.22 -0.06 -0.87 -1.51 -0.1
0.58 0.55 0.13 -0.24 0.43 0.26 0.59 -0.56 -1.1 -1.33 0.45 0.37 -0.12 -0.61 -0.83 -0.5
0.03 -2.44 0.49 0.61 0.8 1.22 -0.43 0.38 -1.15 -1.28 -0.11 -0.84 -0.27 -0.65 -0.48 0.29
0.24 -0.43 0.48 0.29 0.45 0.7 0.78 -0.42 -2.93 -2.99 0.14 0.06 -0.01 -0.01 -0.61 -0.07
0.36 -1.37 0.55 0.34 0.42 0.05 -0.42 -1.03 -6.07 -5.69 -0.27 0.5 0.66 0.14 0.23 0.91
-0.14 -1.77 0.3 0.87 0.86 1.03 -0.02 -0.12 -1.84 -1.53 0.03 -0.92 0.47 -0.23 -1.1 0.12
0.22 -0.28 0.18 0.1 0.08 0.48 1.04 -0.66 -2.64 -1.88 -0.31 0.04 0.54 -0.34 -1.5 0.86
-0.7 -1.89 0.31 0.53 0.49 0.85 0.49 0.01 -0.7 0.18 0.8 -0.23 0.1 -1.11 -1.81 -0.62
0.55 0.47 -0.39 0.01 0.12 0.22 0.05 -0.61 -1.14 -0.23 0.45 0.44 -0.14 -0.22 -0.51 -0.07
0.82 0.47 -0.88 -0.63 0.09 -0.2 0.54 -1.0 -1.93 -1.48 -0.38 0.4 0.55 0.43 0.13 0.2
0.25 -1.28 0.16 0.16 0.51 0.66 -0.12 -0.07 -1.04 -0.54 0.16 -0.29 0.57 -0.17 -0.59 0.2
-0.41 -2.9 -0.9 -1.09 -0.18 -0.3 -0.29 -0.53 -1.52 -2.11 -0.89 -0.53 1.69 1.4 0.25 1.03
-0.04 -0.26 0.31 0.76 0.24 0.2 -0.41 -1.14 -1.41 -0.54 0.23 0.36 0.13 -0.2 -0.17 0.43
-0.51 -2.89 0.43 0.74 0.53 0.92 0.37 -0.17 -0.56 -0.11 0.88 -0.14 -0.07 -1.04 -1.61 -0.95
-0.2 -2.0 0.49 0.51 0.73 0.68 0.32 -0.63 -1.49 -1.47 0.06 -0.49 0.49 0.11 -0.14 0.04
-0.35 -0.93 0.55 1.31 0.88 1.67 -1.43 -2.89 -3.67 -3.25 1.31 1.29 -5.13 - -4.16 -5.26
0.48 -2.16 1.23 1.63 0.55 0.45 -0.45 -1.53 -2.72 -3.44 1.19 1.26 -5.11 -5.35 -5.33 -5.0
0.41 -1.33 0.3 0.23 0.44 0.46 0.64 -0.18 -0.89 -0.02 0.44 -0.34 -0.11 -0.56 -0.81 -0.23
0.28 -2.14 0.14 -0.17 0.53 0.6 -0.11 0.35 -3.68 -3.21 -0.13 0.21 0.99 -0.11 -0.48 0.63
0.36 -1.32 0.08 0.07 0.73 0.31 0.43 0.31 -0.82 -1.41 0.55 0.15 0.02 -0.54 -0.77 -0.11
0.47 -1.23 0.56 0.36 0.6 0.79 0.18 -1.27 -0.56 0.27 0.77 0.02 -0.53 -1.17 -1.69 -0.75
-0.3 -1.82 0.65 0.96 1.16 0.74 0.38 0.24 -1.41 -0.94 0.2 -0.89 -0.26 -1.15 -1.55 -0.36
-0.49 -1.39 -0.1 1.14 0.48 1.04 1.39 0.16 -2.51 -2.46 0.75 -0.53 -1.2 -0.71 - -0.32
-0.08 -1.87 -0.12 -0.37 0.8 -0.01 -0.88 -0.72 -1.11 -1.87 0.39 -0.36 0.73 0.74 0.02 1.03
0.35 -0.38 0.69 1.17 0.57 -0.0 -0.31 -0.56 -0.11 -0.09 0.44 0.45 -1.06 -2.02 -1.32 -1.26
0.07 -0.08 -0.03 0.37 0.07 -0.06 0.11 -0.77 -0.49 -1.03 -0.14 -0.77 0.85 0.28 0.15 0.3
0.18 -2.07 -0.21 -0.48 0.52 0.75 0.23 -0.13 -1.82 -1.76 0.17 -0.12 1.06 0.63 -0.65 -0.07
0.05 -1.61 0.28 0.54 0.41 0.84 -0.03 -0.37 -0.62 0.36 0.75 -0.22 0.06 -1.02 -1.49 -0.46
0.14 0.25 0.75 0.95 0.44 0.91 0.39 -1.16 -0.71 -0.98 0.87 0.18 -1.78 -2.11 -2.56 -1.61
-0.17 -1.29 -0.03 0.23 0.32 0.32 0.38 -0.04 -0.09 0.1 0.57 -0.31 0.17 -0.59 -1.07 0.27
-0.02 -0.66 -0.22 0.2 -0.05 -0.03 0.21 -0.36 -0.52 -0.35 0.07 -0.25 0.4 0.22 0.18 0.58
-3.25 0.32 0.38 0.22 1.09 1.39 0.07 -0.88 -0.05 0.53 0.7 -1.86 0.06 -2.62 - -1.64
0.44 -1.88 -0.37 -0.07 0.54 0.81 0.34 0.07 -3.67 -5.16 -0.03 0.26 0.23 0.03 -0.23 0.84
-3.38 - 0.38 1.37 0.39 0.56 1.96 -5.26 - - 0.91 1.6 - - -1.31 -
-0.18 -0.81 0.32 0.46 0.65 -0.02 0.93 -1.08 -0.46 -0.14 0.46 0.39 -0.3 -0.9 -1.09 -0.25
0.13 -2.89 0.25 0.09 0.42 0.76 -0.19 -0.78 -2.8 -1.81 0.26 -0.69 0.99 0.32 0.15 0.53
0.02 -1.0 0.13 0.53 0.34 0.74 0.29 -0.54 -1.34 -0.42 0.23 -0.64 0.55 -0.08 -0.85 0.24
-4.36 -3.38 -0.05 0.52 1.63 0.32 2.05 -3.34 - - 1.12 1.36 -3.23 -4.32 - -
-0.07 -0.35 0.01 -1.3 0.05 0.33 -0.27 -1.84 -3.15 -2.93 -0.68 -0.22 1.3 1.26 0.35 0.69
0.33 -1.38 -0.17 0.45 0.39 0.85 0.27 -0.55 -1.06 -0.3 0.56 -0.38 0.58 -0.48 -0.98 -0.22
-1.58 -0.66 -0.79 -1.81 -0.2 -0.52 -0.7 -1.23 -3.22 -4.13 -1.23 -0.59 0.96 1.68 1.91 0.49
0.3 -0.87 -0.04 0.75 0.42 1.09 -0.08 -0.45 -0.46 -0.07 0.31 -0.36 -0.1 -0.86 -1.7 -0.12
0.21 -1.2 0.25 0.32 0.66 0.75 0.41 -0.42 -0.61 -0.53 0.53 -0.68 -0.09 -0.64 -0.39 -0.21
-0.18 -1.35 0.18 0.3 0.54 0.79 -0.2 -0.54 -0.62 -0.43 0.7 -0.03 0.34 -0.31 -1.19 0.15
-0.19 -0.64 0.16 0.14 0.65 0.52 1.01 -1.5 -1.15 -1.8 0.37 -1.79 0.32 0.29 -0.45 0.45
-3.09 - -0.99 0.6 0.73 -0.77 1.82 -0.37 -0.16 -1.69 0.35 -1.76 0.6 -0.17 -0.42 0.48
-1.37 -0.01 0.93 1.1 1.21 1.16 0.98 -1.05 -1.64 -1.81 0.81 -1.29 -2.14 - -1.16 -3.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.