1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_314 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- 1.5 - - -1.7 - 3.65 -1.68 - - - - - - - -
-0.77 -1.0 -3.18 -3.19 -2.68 -2.19 1.4 0.75 -1.7 -0.5 -0.89 0.02 1.04 1.03 0.49 0.95
-2.75 -0.78 -5.14 -4.59 -2.65 -3.07 1.25 -0.24 -4.61 -3.82 -0.7 -0.55 1.38 1.72 0.54 1.56
-0.81 -1.3 -1.67 -1.34 -0.22 -0.57 2.39 0.96 -0.6 -1.19 1.2 0.6 -2.34 -2.93 -3.48 -2.0
-1.28 -0.05 -5.48 -11.16 - - 2.17 0.04 -2.33 -0.85 -0.21 -1.18 1.28 0.55 -0.48 1.26
-0.16 -0.49 -1.4 -0.96 -0.42 -0.33 1.39 0.63 -0.51 -0.72 -0.58 -0.32 0.62 0.58 -0.67 0.45
- 1.62 - - - - 3.64 -1.02 - - - - - - - -
-0.71 0.59 -1.34 -0.77 -0.2 -0.76 1.83 0.8 -1.39 -1.26 0.5 0.61 -0.43 -0.95 -1.09 -0.52
-3.13 -3.88 - -5.68 -4.59 -5.3 -0.49 -1.18 -2.34 -2.15 -4.4 -3.93 1.84 2.26 1.39 1.61
-2.69 -0.85 -1.69 -1.75 -1.53 -1.26 0.07 -0.28 -0.57 -0.89 -0.6 -0.47 1.35 1.64 0.77 1.06
-0.95 1.04 -1.75 - - - 3.04 -1.08 -0.18 - -1.08 -0.19 - - 1.14 -
-1.6 0.49 -1.34 -1.47 -0.17 -0.42 1.61 1.06 0.47 -1.3 -0.04 0.59 -0.44 -0.92 -1.45 -0.24
-0.64 -3.9 -1.92 -1.91 -0.66 -1.72 2.5 0.45 -1.47 -0.44 0.92 0.6 -1.0 -0.55 -0.75 -0.94
-1.26 -0.44 -1.29 -1.87 -1.25 -1.36 1.22 0.31 -1.26 -1.74 -1.4 -0.71 1.07 1.19 1.28 0.33
-0.22 0.57 -1.86 -1.78 0.07 -0.51 1.92 0.23 -2.52 -2.09 0.63 0.74 -0.74 -0.31 -0.92 -0.3
-1.08 - -5.96 -3.62 -3.66 -2.99 1.99 0.32 -1.15 -0.42 0.25 -1.79 0.62 0.88 0.63 1.27
-0.39 -3.09 -1.74 -2.37 -3.63 -2.9 1.4 0.1 -1.68 -1.15 0.54 -0.68 1.67 0.87 -0.78 1.19
-0.67 -2.32 -1.43 -1.37 -1.32 -2.31 1.46 0.42 -2.73 -4.33 -0.63 -0.7 1.53 1.23 0.02 1.01
-4.25 0.77 - - - - 2.85 1.56 -1.91 0.73 - - - -1.08 0.77 -
-2.31 -2.47 -1.2 -2.9 -2.11 -1.96 2.99 1.13 -1.93 0.34 0.7 0.04 -3.51 -4.45 -5.34 -3.8
-0.88 0.49 -0.91 -0.52 0.06 0.29 1.32 0.44 -0.36 -0.21 0.81 0.82 -0.77 -1.66 -2.91 -0.93
-2.12 -6.4 -4.26 -3.92 -3.39 -3.55 0.03 -0.47 -5.27 -5.21 -2.64 -2.69 1.84 1.77 0.07 2.41
-1.17 -5.53 -3.39 -3.13 -6.07 -4.01 1.23 0.16 - - -0.61 -1.5 1.46 1.5 0.86 1.76
-0.83 -1.37 -1.67 -1.59 -1.52 -1.88 1.85 -0.34 -0.58 -1.2 0.71 -0.03 0.8 0.64 -0.13 0.53
-1.36 0.88 -1.23 -0.23 -0.32 -0.18 2.29 1.41 -0.75 -1.4 0.19 -0.04 -4.86 -5.54 -5.47 -3.57
-0.59 -0.23 -1.21 -0.65 -2.0 -1.67 1.64 0.62 0.4 -0.22 0.56 -0.05 -0.12 -0.15 -0.18 -0.18
-2.97 -3.68 -3.85 -4.93 -3.88 -3.31 -0.78 -1.68 -9.61 - -3.47 -2.75 1.89 2.42 0.91 1.78
-0.5 -0.2 -0.98 0.06 0.17 -0.77 2.4 1.29 - - -0.5 -0.33 -1.53 -2.62 - 0.52
- -1.33 - - - - 0.89 - - - - - - 1.4 3.47 -
-0.44 -0.96 -2.96 -2.5 -3.29 -0.78 2.13 0.28 0.03 -0.91 -0.62 -0.82 1.0 0.97 -1.58 0.13
-4.65 -1.54 -5.18 -7.06 -4.63 -4.48 0.3 -0.52 -2.32 -3.46 -4.57 -6.8 1.89 1.7 1.89 1.36
-0.8 -0.85 -2.12 -1.66 -1.95 -2.4 1.4 0.48 -0.52 -0.33 -0.42 -1.13 1.09 0.41 0.28 1.3
-0.96 0.3 -2.97 -2.44 -0.15 -0.32 1.76 -0.17 - - -1.11 -0.01 1.05 0.54 -1.3 1.37
-0.14 -1.83 -1.72 -1.49 -1.62 -1.73 1.79 0.09 -0.33 -0.47 -0.03 -0.71 0.87 0.49 -0.46 0.96
0.15 -0.49 -1.19 -1.62 -3.01 -1.27 1.72 1.2 -0.77 -0.43 -0.04 0.53 -0.04 -0.53 -2.16 0.72
-1.52 -2.55 -3.07 -3.23 -3.5 -2.85 0.27 -0.91 -2.13 -1.84 -1.05 -1.27 1.69 1.82 1.71 0.88
-0.29 -1.71 -1.13 -1.86 -1.75 -1.17 0.91 -0.14 -1.03 -1.25 -0.77 -0.3 0.7 1.11 1.44 0.85
-5.46 1.11 -1.96 -1.33 -2.8 -0.63 2.22 1.62 -2.95 -0.66 -0.03 1.36 -3.27 -3.95 - -2.58
-3.17 -4.84 -3.48 -3.32 -7.51 - 1.11 -0.24 -1.99 -2.5 -0.04 -1.14 1.67 1.29 0.92 1.72
-0.19 -1.4 -1.44 -1.68 -1.37 -2.61 1.45 0.64 -1.08 -0.82 0.32 -0.34 0.73 0.55 -0.62 1.24
-0.88 -0.01 -2.46 -1.9 -1.26 -0.12 1.97 1.15 -6.12 -5.38 -1.97 -0.25 0.51 0.42 0.32 0.47
-8.47 -6.65 -2.13 -2.19 -3.13 -0.93 2.91 0.98 -5.48 -7.01 1.15 1.6 -5.74 -4.03 - -4.86
-0.54 -0.29 -1.03 -0.46 -1.46 -0.42 1.79 0.91 -0.56 -0.7 0.46 0.92 -0.64 -0.77 -2.1 -0.29
-3.31 -2.15 - - - - -0.61 -1.36 - - -1.61 -1.71 3.22 2.23 - -
-6.5 -0.61 -3.94 -3.59 -5.41 - 1.61 0.26 -1.18 -1.85 0.05 -0.33 1.28 0.93 1.16 0.85
-4.08 -4.17 -4.86 -5.34 -5.21 -3.94 -1.4 -2.68 - - -5.01 -6.11 2.77 1.68 0.52 1.88
-0.72 -0.65 -4.15 -3.54 -6.07 -6.1 2.5 1.3 -0.05 1.13 -0.74 -0.52 -0.96 -2.06 -2.61 0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.