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Heatmap: Cluster_216 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-5.07 -4.59 1.99 2.03 1.56 1.51 -0.25 -2.44 -3.78 -4.65 -1.19 -1.07 -8.26 -8.36 - -8.97
0.22 -0.97 1.2 1.35 0.49 0.76 -0.52 -1.06 -2.11 -2.02 -0.43 -0.14 -0.18 -0.49 -0.44 -0.41
-4.2 -3.31 1.74 2.09 2.1 1.09 -1.18 -2.75 -3.19 -3.13 -1.14 -0.99 -5.54 -5.64 -4.74 -5.87
-1.02 -5.43 1.62 1.74 1.66 0.76 -0.94 -2.12 -3.74 -4.13 0.05 0.21 -1.69 -1.74 -2.33 -1.6
-0.75 -0.71 0.88 1.13 1.03 0.85 0.06 -0.29 -0.04 -0.26 0.19 -0.16 -1.73 -2.17 -1.61 -1.43
-0.28 -0.58 1.23 1.64 0.91 1.06 0.05 -0.81 -0.67 -0.83 -0.33 -0.65 -2.0 -2.44 -3.28 -1.65
-2.17 -2.16 1.77 2.33 0.8 1.6 -2.28 -2.69 -5.49 -3.61 -0.48 -1.16 -2.47 -2.67 -2.56 -2.35
-11.2 - 1.74 2.35 1.88 1.81 -5.17 -12.06 - - -2.29 -2.7 - - - -
-2.32 -2.8 1.7 1.97 1.31 1.39 -1.57 -1.76 -4.73 -4.44 -0.75 -0.74 -1.09 -2.41 -1.49 -1.1
- - 2.0 2.47 2.3 0.42 -2.87 -10.79 - -6.5 -4.88 -5.57 - - - -
-5.92 -5.93 1.82 2.09 1.84 0.55 -3.76 -1.38 -1.24 -1.53 -1.22 -0.88 -2.5 -2.39 -0.84 -
-1.16 -1.6 1.27 1.2 0.97 0.99 -0.0 -0.2 -0.75 -1.18 0.02 -0.11 -0.96 -1.56 -1.19 -1.21
-0.84 -1.82 1.14 1.28 0.78 0.52 0.4 -1.01 -0.02 -0.6 0.04 -1.25 -0.07 -0.92 -1.79 -0.51
-2.13 -1.26 1.77 1.69 1.33 1.16 -0.17 -3.56 -2.58 -3.49 0.2 0.12 -2.45 -3.67 -4.79 -2.39
-2.16 -0.48 1.87 1.85 1.95 0.99 -3.09 -2.1 -1.99 -1.84 -1.69 -1.57 -3.25 -3.69 -4.49 -2.53
-7.4 -3.82 2.19 2.33 1.55 1.57 -7.19 -10.2 -8.24 -9.18 -2.04 -2.31 - - - -
-4.0 -1.66 2.07 2.01 1.97 1.09 -1.56 -3.5 -5.4 -5.28 -2.21 -2.13 -4.44 -3.24 -2.46 -3.34
-8.73 -6.18 -5.03 -4.17 -5.13 -5.28 - -10.52 -7.23 -5.59 -6.14 -6.24 1.54 2.42 2.18 1.58
-1.09 -0.86 1.2 1.25 1.21 0.49 -0.06 -0.81 -0.39 -0.48 -0.0 0.05 -0.99 -1.84 -2.13 -0.88
-3.53 -1.3 1.41 1.58 1.22 1.38 -0.31 -0.77 -1.09 -2.42 0.58 0.26 -3.77 -5.42 -5.52 -3.7
-6.34 -8.98 1.85 1.48 1.73 1.64 -5.61 -4.37 -5.43 -3.99 0.28 0.72 -4.91 -7.27 -3.99 -4.12
-4.02 -3.49 1.66 2.06 1.18 1.22 -0.63 -1.6 -2.3 -1.4 0.17 -0.07 -3.43 -3.89 -4.23 -3.88
-2.31 -1.8 1.37 1.81 0.98 0.89 -0.48 -0.98 -0.88 -0.78 0.18 -0.33 -1.29 -2.06 -2.01 -1.25
- - 1.88 2.19 1.71 1.39 -0.06 -1.74 - - - - -2.33 -2.81 -3.85 -2.42
-0.08 -1.62 1.08 1.59 0.78 1.09 -0.47 -1.9 -1.52 -1.56 -0.3 -0.82 -0.33 -0.97 -0.83 -0.26
-3.3 -2.64 1.65 1.7 1.28 1.07 -1.52 -1.12 -0.94 -0.63 0.21 0.19 -3.19 -2.98 -4.76 -1.94
-1.62 -1.41 1.39 1.56 1.45 0.66 -0.23 -0.71 -0.13 -0.39 -0.34 -0.15 -2.7 -3.08 -2.59 -2.67
-2.4 -1.16 1.49 1.59 1.47 0.4 -0.95 -2.09 -2.1 -2.14 -1.75 -1.47 -0.64 0.11 -0.21 0.01
-11.36 - 1.81 2.1 2.18 1.45 -1.53 -6.3 -3.72 -1.94 -3.47 -2.94 -9.67 -9.18 -5.37 -7.79
-2.15 -0.73 1.64 1.76 1.51 0.82 -1.06 -1.56 -0.58 -0.42 -0.19 -0.63 -3.55 -4.16 -4.66 -3.24
-1.26 -1.85 1.8 1.73 1.81 0.88 -1.72 -2.01 -1.23 -1.12 -0.75 -0.39 -3.37 -3.62 -3.88 -2.88
-7.2 -10.0 1.75 2.08 1.5 1.32 -3.81 -5.15 -2.72 -3.85 0.46 0.45 -8.38 -9.42 -8.62 -7.58
-0.89 -1.44 1.17 1.56 1.04 0.75 -0.75 -0.98 -0.25 0.15 -0.01 -0.18 -1.52 -2.14 -1.92 -1.47
-0.55 -1.59 1.4 1.33 0.68 0.88 -0.44 -1.18 -2.66 -2.49 -0.55 -0.37 -0.26 -0.1 -0.32 -0.23
-6.86 - 2.09 2.35 1.97 1.26 -4.23 -3.38 - -8.41 -5.05 -3.9 - -7.23 -4.16 -7.26
-0.41 -1.74 1.03 1.25 0.73 0.56 0.08 -0.74 -0.25 -0.28 0.07 0.01 -0.92 -1.39 -1.02 -0.69
-1.14 - 1.51 2.31 1.16 1.45 -6.16 -5.1 -1.78 -2.06 -0.86 -1.25 -1.4 -2.04 -2.18 -1.38
-3.88 -5.62 2.03 2.15 1.36 1.37 -4.22 -2.84 -3.12 -2.03 -1.04 0.05 -6.44 -6.21 -3.46 -3.72
-5.33 -3.03 2.09 2.25 2.03 1.12 -4.19 -2.96 -5.31 -3.93 -3.06 -2.76 -7.41 -8.32 -7.53 -7.85
-0.19 -4.05 1.81 2.16 0.85 1.17 -2.2 -1.75 -5.3 -3.48 -0.34 -0.89 -1.94 -2.0 -2.19 -1.58
-0.49 -3.41 1.66 1.83 1.56 0.7 -1.39 -3.52 -4.07 -4.08 -0.76 -0.36 -0.88 -1.19 -1.0 -1.1
- -6.77 1.11 2.1 1.82 -0.33 -2.97 -2.91 -0.14 1.03 -0.45 0.14 - -6.44 -2.78 -5.46
-2.03 -2.37 2.12 2.14 1.87 0.82 -2.18 -4.9 -3.07 -4.59 -2.24 -3.4 -2.62 -2.26 -4.65 -1.94
-10.74 - 1.95 2.19 2.43 0.77 -3.71 -4.11 - -9.35 -4.67 -3.69 -3.89 -4.78 -3.99 -4.57
-2.44 -0.4 1.64 1.6 1.59 0.66 0.38 -3.68 -1.52 -2.11 -1.75 -0.79 -1.2 -0.81 -2.54 -1.71
-1.25 -2.45 1.1 1.24 1.0 0.73 0.09 -0.47 -0.38 -0.97 0.05 0.2 -1.03 -0.98 -1.14 -0.91
-2.49 -10.73 1.8 1.99 2.06 1.03 -0.95 -1.32 -2.87 -3.27 -1.48 -0.8 -6.7 -5.65 -5.73 -6.19
-11.77 - 1.47 1.93 1.66 1.42 -2.78 -4.25 -0.39 -0.28 -0.05 -0.27 - - - -
-1.98 -3.41 2.02 2.32 1.04 1.34 -1.34 -2.19 -5.32 -3.95 -1.1 -1.41 -3.09 -3.78 -3.23 -2.7
-1.54 -2.07 1.6 2.08 1.14 1.29 -0.91 -2.28 -2.06 -2.92 -0.0 0.39 -5.28 -5.61 -5.89 -5.04
-2.3 -3.24 1.78 1.82 1.55 1.65 -1.03 -1.42 -2.77 -2.88 -2.14 -2.27 -1.72 -1.93 -3.27 -1.41
-1.81 -1.89 1.71 1.91 1.77 -0.21 -0.82 -2.56 -0.7 -0.43 -1.08 0.16 -3.51 -3.57 -3.06 -2.63
-0.15 -1.79 1.52 1.71 1.38 1.04 -0.34 -1.84 -3.24 -3.34 -0.83 -0.58 -2.02 -1.12 -1.08 -1.68
-3.44 -0.95 2.12 1.94 1.67 0.96 -4.7 -0.67 -3.63 -2.98 -2.25 -1.31 -2.47 -4.63 -2.34 -2.45
-1.79 -6.01 1.97 2.22 1.72 1.03 -0.67 -2.79 -3.74 -4.06 -1.36 -1.85 -4.53 -6.02 -4.09 -3.58
-3.66 -4.87 1.7 1.7 1.67 1.58 -1.95 -5.48 -4.18 -4.97 0.12 0.82 - -9.73 -7.66 -8.76
-7.4 -3.41 1.84 2.2 2.23 1.44 -5.43 - -8.04 -7.98 -3.17 -2.53 - - - -
-3.19 -6.41 1.57 1.94 0.99 0.78 0.33 -1.8 -1.88 -1.58 0.29 -0.37 -1.58 -1.73 -2.1 -1.46
-6.68 -9.37 1.96 2.21 2.04 1.35 -2.38 -3.85 -7.65 -7.39 -2.15 -1.7 -10.1 - - -9.23
-7.01 -3.89 1.94 2.35 2.06 0.73 -4.14 -6.66 -4.48 -7.91 -1.12 -0.82 -8.63 - -7.66 -
-6.41 -9.75 1.51 2.04 2.03 1.25 -0.0 -2.76 -3.04 -3.47 -1.15 -0.66 -7.28 -7.38 -2.99 -
- - 1.84 2.41 1.36 0.24 - - -2.28 1.24 -0.87 -1.97 - - - -
-1.33 -3.22 1.46 1.96 1.15 1.27 -0.37 -2.11 -2.64 -1.78 0.23 -0.0 -3.64 -3.41 -1.96 -2.61
-0.79 -0.51 1.05 1.56 0.85 1.07 -0.34 -1.26 -0.6 -0.17 0.26 0.27 -2.6 -3.11 -3.03 -2.07
-2.93 -4.01 1.76 1.65 1.23 1.23 -1.11 -2.17 -3.42 -3.52 -1.06 -0.33 -0.4 -0.65 -1.1 -0.8
-1.37 -3.13 1.53 1.89 0.53 1.29 -1.1 -1.28 -2.62 -1.6 -0.83 -0.83 0.07 -0.86 -1.79 -0.65
-4.99 -9.15 2.17 2.15 1.92 1.2 -1.19 -5.85 - -9.59 -1.69 -2.69 -10.3 -10.4 - -8.43
-2.7 -1.21 1.46 1.83 1.74 -0.43 -2.64 -2.32 -1.57 0.64 -0.99 -1.24 -1.31 -1.03 -0.74 -1.5
-2.58 0.17 1.52 1.74 1.52 0.8 0.05 -1.22 -1.53 -1.51 -0.39 -0.26 -4.79 -5.0 -4.93 -4.4
-0.8 -1.11 1.23 1.49 1.33 1.04 -0.38 -1.46 -0.96 -1.51 -0.68 -0.53 -1.35 -1.74 -0.7 -0.68
-7.4 - 2.09 2.27 1.89 0.78 0.01 -7.29 -6.08 - -5.99 -2.63 -4.72 -3.82 -2.75 -
-2.83 -2.94 2.06 2.12 0.7 0.57 -4.24 -0.69 0.26 0.32 -1.12 -1.49 - -3.86 - -3.44
-1.49 -2.19 1.42 1.59 1.28 0.99 -1.59 -2.21 -0.74 0.29 0.37 -0.3 -2.34 -2.21 -2.87 -1.72
-4.41 -7.08 1.77 2.15 1.73 1.55 -3.63 -5.92 -2.44 -5.11 -0.75 -0.15 - -8.61 -3.74 -
-6.71 -5.42 2.08 2.23 2.27 0.78 -2.82 -3.44 -3.75 -5.1 -3.39 -3.6 -9.35 -8.45 -8.38 -9.47
-5.03 -5.93 0.82 0.75 0.61 0.03 -1.09 -1.41 -5.21 -4.63 -1.65 -1.63 0.9 1.24 0.54 1.45
-0.97 -0.79 1.62 1.8 1.55 -0.12 -3.54 -1.4 -1.89 -0.33 -2.68 -0.78 -0.87 -2.26 -0.49 -0.39
-8.62 -6.21 2.05 2.23 1.85 1.04 -4.11 -3.21 - -8.19 -3.64 -2.07 -2.52 -2.23 -1.62 -1.68
-13.38 - 1.78 2.35 1.56 1.74 -3.04 -9.46 -8.01 -6.17 -0.47 -1.67 - - - -
-1.41 -4.19 1.58 1.89 1.38 1.36 -1.13 -2.29 -2.05 -1.93 -0.16 -0.51 -1.97 -2.42 -2.31 -1.75
- -5.86 1.9 2.29 1.94 1.26 -6.63 -2.53 -0.7 -1.61 -7.31 - - - - -
- -6.87 1.56 1.83 1.91 1.25 -0.46 -4.92 -3.65 -2.91 0.22 0.28 - - - -
-5.12 -5.87 1.49 2.01 1.5 1.3 -0.13 -2.59 -1.46 -1.7 0.02 -0.19 -4.12 -4.54 -4.59 -4.03
-0.69 -5.25 1.42 2.43 0.76 1.2 -4.38 -3.07 -1.44 -2.08 -1.87 -3.56 -2.21 -2.31 0.35 -1.11
-7.36 -6.34 2.17 2.13 1.75 1.58 -3.57 -5.07 -2.39 -3.72 -1.89 -3.28 -8.88 -9.42 -6.86 -7.05
-4.78 -0.58 1.43 1.9 1.49 0.41 -1.38 -2.11 -0.35 0.32 0.25 -0.3 -6.15 -6.44 -5.01 -6.69
-2.39 -6.79 1.8 1.57 1.94 1.19 -2.18 -3.28 -2.95 -3.22 0.52 0.25 -6.57 - -6.11 -5.63
-0.43 -0.97 1.14 1.54 1.02 0.94 -0.32 -2.01 -1.23 -0.75 0.12 0.18 -1.54 -1.69 -1.69 -1.19
-4.61 - 1.92 2.25 1.87 1.56 -2.91 -5.33 -5.46 -4.92 -1.65 -1.89 - - - -
-2.22 -5.43 1.51 2.31 1.49 1.24 -2.52 -2.91 -2.91 -3.29 -1.3 -1.42 -1.21 -1.46 -2.4 -1.06
-0.69 -1.71 1.06 1.55 0.92 0.75 -0.07 -0.23 -0.24 -0.23 -0.03 -0.77 -1.23 -1.77 -1.81 -1.26
-3.13 -3.2 1.85 1.86 1.07 0.6 0.09 -0.81 -1.8 -2.24 -0.36 -0.47 -1.03 -1.9 -3.01 -1.32
-6.54 -0.28 1.54 2.17 0.82 1.59 -4.27 -1.07 -2.03 -0.26 0.0 -1.41 - - - -
-0.77 -2.67 1.14 1.33 0.67 0.8 0.02 -0.25 -0.68 -0.37 0.31 -0.83 -0.27 -1.14 -1.77 -0.8
-8.02 - 1.72 1.89 1.55 0.89 -2.4 -3.06 -0.62 -0.5 0.29 0.35 - -6.48 -4.76 -
-4.27 -3.43 2.12 2.12 1.52 -0.01 -1.7 -1.93 -1.6 -0.06 -1.83 -1.61 - - -0.6 -2.7
- -7.48 1.93 2.09 2.27 0.94 -0.92 -4.14 -3.99 -5.26 -2.52 -1.76 -6.57 - -5.6 -
-5.21 -8.56 2.07 2.44 2.05 0.62 -4.98 -7.79 -7.44 - -1.34 -2.17 - -7.98 -6.61 -7.0
-4.21 -3.79 2.06 2.33 1.99 0.72 0.0 -4.35 - - - - - - - -
-6.86 -6.09 1.84 2.41 1.25 1.24 -2.07 -2.92 -1.59 -1.52 -0.66 -0.9 -4.96 -5.06 -5.57 -4.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.