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Heatmap: Cluster_216 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
3.07 4.3 409.28 423.01 305.01 295.15 87.14 19.1 7.52 4.1 45.15 49.33 0.34 0.32 0.0 0.21
57.39 25.18 112.8 125.36 69.0 83.07 34.41 23.52 11.39 12.09 36.59 44.61 43.5 34.97 36.26 36.9
20.5 37.99 1256.66 1602.47 1613.11 802.74 166.87 56.24 41.24 43.23 171.4 189.68 8.11 7.59 14.08 6.46
130.3 6.13 813.58 882.18 837.3 449.13 137.47 61.07 19.75 15.08 274.83 304.98 81.94 79.37 52.53 87.51
33.61 34.44 103.52 123.44 114.85 101.7 59.0 46.16 54.72 47.26 64.5 50.48 16.97 12.56 18.49 20.95
12.99 10.52 36.92 49.28 29.64 32.88 16.34 9.01 9.89 8.85 12.52 10.03 3.94 2.91 1.62 5.04
43.98 44.08 674.24 996.88 344.14 598.22 40.76 30.54 4.39 16.24 141.69 88.23 35.7 31.11 33.43 38.69
0.04 0.0 293.71 447.5 323.53 309.48 2.44 0.02 0.0 0.0 18.02 13.56 0.0 0.0 0.0 0.0
11.78 8.48 190.99 231.06 146.46 154.34 19.79 17.43 2.22 2.72 35.14 35.32 27.63 11.12 20.99 27.54
0.0 0.0 38.19 52.94 47.09 12.84 1.3 0.01 0.0 0.11 0.32 0.2 0.0 0.0 0.0 0.0
0.07 0.07 14.57 17.53 14.81 6.06 0.3 1.59 1.75 1.43 1.77 2.25 0.73 0.79 2.3 0.0
12.06 8.92 64.81 61.91 52.88 53.57 26.93 23.51 15.97 11.86 27.31 24.9 13.88 9.16 11.82 11.61
10.33 5.25 40.83 44.86 31.72 26.59 24.48 9.19 18.33 12.19 19.11 7.8 17.7 9.78 5.34 12.97
9.09 16.6 135.62 128.5 100.21 88.51 35.32 3.37 6.66 3.53 45.67 43.31 7.25 3.11 1.44 7.57
25.7 82.51 420.86 415.81 445.59 228.81 13.47 26.92 28.89 32.19 35.76 38.82 12.13 8.93 5.12 19.93
0.42 5.06 325.39 358.03 208.14 211.11 0.49 0.06 0.24 0.12 17.29 14.41 0.0 0.0 0.0 0.0
11.11 56.34 745.13 717.68 696.47 379.51 60.43 15.78 4.21 4.58 38.35 40.6 8.2 18.83 32.23 17.56
0.05 0.27 0.59 1.07 0.55 0.5 0.0 0.01 0.13 0.4 0.28 0.26 56.44 103.85 87.88 57.92
6.04 7.1 29.69 30.54 29.71 18.03 12.32 7.36 9.82 9.21 12.86 13.3 6.5 3.6 2.95 7.02
17.44 81.82 535.73 602.21 471.2 523.94 162.32 118.03 94.51 37.66 300.72 240.67 14.75 4.71 4.39 15.49
1.54 0.25 447.89 348.11 412.46 386.76 2.54 6.01 2.89 7.81 150.73 204.43 4.15 0.81 7.82 7.14
4.28 6.15 218.53 289.51 156.6 161.52 44.77 22.92 14.03 26.15 77.97 65.78 6.41 4.66 3.69 4.69
13.3 18.89 170.75 230.9 130.05 121.83 47.25 33.44 35.75 38.46 74.93 52.33 26.94 15.82 16.38 27.81
0.0 0.0 33.26 41.41 29.51 23.78 8.67 2.71 0.0 0.0 0.0 0.0 1.8 1.29 0.63 1.69
41.65 14.35 92.9 132.74 75.73 93.52 31.73 11.81 15.36 14.94 35.81 25.02 35.06 22.54 24.71 36.65
16.51 26.02 510.98 528.97 394.81 342.26 56.72 74.87 84.49 104.84 188.42 185.18 17.77 20.58 6.0 42.29
39.11 45.42 316.49 355.16 328.31 189.88 102.99 73.68 109.75 92.06 95.02 108.52 18.51 14.2 20.05 18.95
16.04 37.74 238.25 253.94 233.75 111.96 43.73 19.94 19.79 19.13 25.23 30.45 54.44 91.4 73.01 85.14
0.03 0.0 283.15 345.97 365.65 220.04 28.02 1.02 6.13 21.05 7.29 10.5 0.1 0.14 1.95 0.36
14.26 38.24 198.07 215.43 181.01 112.05 30.52 21.54 42.39 47.38 55.75 41.05 5.42 3.54 2.51 6.73
167.35 111.05 1390.05 1324.22 1406.06 736.68 121.23 99.5 171.12 184.44 237.59 304.51 38.66 32.59 27.22 54.24
0.84 0.12 417.45 522.83 350.82 309.64 8.82 3.5 18.77 8.57 170.43 169.9 0.37 0.18 0.31 0.65
27.83 18.96 116.18 152.49 106.13 86.99 30.61 26.22 43.48 57.35 51.2 45.51 17.96 11.73 13.65 18.6
21.25 10.32 81.92 78.33 49.79 57.1 22.86 13.68 4.91 5.54 21.25 24.08 25.87 29.1 24.92 26.42
0.19 0.0 94.87 113.41 87.3 53.18 1.19 2.14 0.0 0.07 0.67 1.49 0.0 0.15 1.25 0.15
27.11 10.79 73.37 85.5 59.67 53.16 38.1 21.57 30.18 29.72 37.79 36.28 19.03 13.72 17.78 22.38
2.36 0.0 14.88 25.81 11.64 14.19 0.07 0.15 1.51 1.25 2.87 2.18 1.97 1.26 1.15 2.01
7.28 2.17 436.53 475.04 274.9 276.32 5.75 15.01 12.37 26.18 52.01 111.32 1.24 1.45 9.72 8.13
8.0 39.32 1370.28 1529.16 1310.7 698.25 17.61 41.37 8.12 21.09 38.5 47.26 1.89 1.0 1.73 1.39
247.28 16.99 984.24 1262.43 507.75 635.53 61.27 83.63 7.17 25.31 222.37 151.96 73.49 70.54 61.73 94.2
23.34 3.1 103.96 116.77 96.98 53.27 12.57 2.86 1.95 1.95 19.42 25.54 17.88 14.36 16.38 15.3
0.0 0.03 5.95 11.82 9.71 2.19 0.35 0.37 2.5 5.61 2.02 3.04 0.0 0.03 0.4 0.06
0.75 0.6 13.42 13.54 11.24 5.45 0.68 0.1 0.37 0.13 0.65 0.29 0.5 0.64 0.12 0.8
0.01 0.0 65.65 77.7 92.0 29.11 1.3 0.98 0.0 0.03 0.67 1.32 1.15 0.62 1.07 0.72
1.82 7.49 30.68 29.88 29.76 15.58 12.8 0.77 3.43 2.29 2.93 5.71 4.31 5.64 1.69 3.0
24.81 10.82 126.51 139.51 118.09 97.86 62.8 42.63 45.18 30.05 61.16 67.76 28.85 29.9 26.78 31.31
14.83 0.05 290.45 330.79 347.12 170.72 43.22 33.38 11.43 8.62 29.86 47.71 0.8 1.66 1.57 1.14
0.01 0.0 140.51 193.49 159.53 135.52 7.35 2.66 38.6 41.63 48.85 42.14 0.0 0.0 0.0 0.0
27.14 10.03 433.82 534.33 219.38 270.12 42.19 23.46 2.67 6.91 49.66 40.2 12.5 7.77 11.38 16.48
32.13 22.27 284.03 394.44 206.63 229.31 49.87 19.26 22.38 12.37 93.42 122.63 2.4 1.92 1.58 2.85
2.43 1.27 41.25 42.49 35.21 37.76 5.89 4.48 1.76 1.64 2.73 2.49 3.65 3.15 1.24 4.51
7.51 7.12 86.43 98.88 90.16 22.74 14.97 4.47 16.18 19.52 12.49 29.42 2.32 2.22 3.17 4.26
16.85 5.39 53.65 61.09 48.63 38.34 14.69 5.19 1.98 1.84 10.5 12.47 4.61 8.56 8.8 5.8
21.53 121.67 1017.81 898.48 745.19 456.02 9.0 147.18 18.96 29.72 49.11 94.6 42.31 9.45 46.15 42.93
14.25 0.77 193.42 228.88 162.39 100.53 30.9 7.1 3.69 2.95 19.2 13.61 2.14 0.76 2.9 4.12
4.75 2.06 194.66 194.55 191.22 179.7 15.57 1.35 3.32 1.92 65.27 106.01 0.0 0.07 0.3 0.14
0.14 2.19 83.57 107.03 109.65 63.5 0.54 0.0 0.09 0.09 2.6 4.04 0.0 0.0 0.0 0.0
4.69 0.5 126.56 163.64 85.0 73.23 53.48 12.24 11.61 14.3 52.19 32.93 14.32 12.86 9.97 15.49
0.88 0.14 350.72 417.11 372.02 230.12 17.35 6.24 0.45 0.54 20.32 27.74 0.08 0.0 0.0 0.15
0.36 3.12 177.66 235.06 192.97 76.34 2.62 0.46 2.07 0.19 21.17 26.12 0.12 0.0 0.23 0.0
0.24 0.02 57.14 82.25 81.79 47.6 19.98 2.96 2.44 1.8 9.02 12.68 0.13 0.12 2.53 0.0
0.0 0.0 4.0 5.92 2.86 1.32 0.0 0.0 0.23 2.64 0.61 0.28 0.0 0.0 0.0 0.0
17.53 4.74 120.98 170.83 97.83 106.4 34.07 10.21 7.05 12.82 51.57 43.89 3.53 4.13 11.33 7.23
63.69 77.42 227.44 324.76 198.15 230.79 87.19 45.82 72.41 98.08 132.02 132.23 18.19 12.72 13.45 26.28
11.12 5.25 286.21 265.46 198.33 198.91 39.17 18.75 7.9 7.37 40.49 67.28 64.1 53.87 39.42 48.57
18.7 5.54 139.87 178.96 69.96 118.21 22.65 19.97 7.88 16.01 27.19 27.28 50.91 26.72 14.02 30.79
2.95 0.17 422.4 416.0 354.9 214.98 41.05 1.63 0.0 0.12 29.12 14.49 0.07 0.07 0.0 0.27
5.23 14.65 93.08 120.92 113.33 25.24 5.44 6.78 11.4 52.87 17.11 14.33 13.67 16.65 20.35 12.03
99.62 671.27 1705.36 1988.88 1704.85 1041.35 617.87 255.41 206.74 208.93 455.65 496.45 21.57 18.67 19.51 28.21
12.26 9.9 50.17 59.84 53.57 43.77 16.37 7.75 10.94 7.5 13.35 14.76 8.35 6.38 13.13 13.29
0.01 0.0 6.54 7.41 5.67 2.63 1.55 0.01 0.02 0.0 0.02 0.25 0.06 0.11 0.23 0.0
0.93 0.86 27.43 28.54 10.65 9.78 0.35 4.07 7.84 8.22 3.02 2.34 0.0 0.45 0.0 0.61
53.11 32.79 400.21 450.28 362.95 297.01 49.68 32.25 89.38 182.16 192.63 121.19 29.43 32.36 20.43 45.38
2.24 0.35 161.68 210.72 157.51 138.8 3.83 0.79 8.75 1.38 28.36 42.71 0.0 0.12 3.57 0.0
0.92 2.26 406.36 452.07 463.72 165.74 13.64 8.86 7.14 2.8 9.18 7.95 0.15 0.28 0.29 0.14
0.26 0.14 15.16 14.53 13.13 8.8 4.06 3.24 0.23 0.35 2.74 2.78 16.03 20.28 12.5 23.59
54.02 61.29 326.39 368.71 311.28 97.39 9.13 40.21 28.63 84.44 16.58 61.62 57.8 22.19 75.2 80.79
0.04 0.21 64.0 72.55 56.01 31.8 0.9 1.67 0.0 0.05 1.25 3.68 2.7 3.31 5.05 4.84
0.02 0.0 649.44 960.27 556.45 631.97 23.02 0.27 0.73 2.62 136.33 59.31 0.0 0.0 0.0 0.0
18.47 2.67 146.82 181.66 127.01 125.29 22.3 10.0 11.83 12.88 43.93 34.44 12.47 9.12 9.88 14.58
0.0 0.04 8.89 11.65 9.18 5.7 0.02 0.41 1.47 0.78 0.02 0.0 0.0 0.0 0.0 0.0
0.0 0.1 34.6 41.59 43.87 27.83 8.51 0.39 0.93 1.55 13.65 14.22 0.0 0.0 0.0 0.0
1.29 0.76 126.04 180.48 126.47 110.47 40.89 7.47 16.29 13.83 45.41 39.2 2.59 1.93 1.86 2.74
0.97 0.04 4.19 8.44 2.66 3.6 0.08 0.19 0.58 0.37 0.43 0.13 0.34 0.32 2.0 0.73
3.42 6.94 2531.38 2457.21 1891.27 1680.2 47.41 16.78 107.41 42.8 151.62 57.98 1.19 0.82 4.85 4.24
1.05 19.19 77.78 107.56 80.87 38.11 11.08 6.65 22.64 36.01 34.1 23.4 0.4 0.33 0.9 0.28
5.55 0.26 101.15 86.4 111.49 66.42 6.4 2.98 3.77 3.12 41.69 34.67 0.31 0.0 0.42 0.59
40.44 27.8 119.72 158.64 110.53 104.71 43.76 13.54 23.27 32.43 59.08 61.58 18.74 16.87 16.92 23.89
0.32 0.0 29.71 37.28 28.63 23.13 1.04 0.2 0.18 0.26 2.5 2.12 0.0 0.0 0.0 0.0
0.7 0.08 9.35 16.18 9.2 7.74 0.57 0.43 0.43 0.33 1.33 1.22 1.41 1.19 0.62 1.57
32.47 16.03 109.65 153.09 98.99 87.94 50.01 44.78 44.42 44.55 51.22 30.84 22.42 15.37 14.98 21.95
2.77 2.64 87.89 88.27 51.11 36.87 25.96 13.89 7.0 5.13 18.91 17.55 11.91 6.5 3.01 9.71
0.03 1.96 6.87 10.66 4.17 7.15 0.12 1.13 0.58 1.98 2.37 0.89 0.0 0.0 0.0 0.0
8.58 2.3 32.14 36.79 23.35 25.52 14.84 12.31 9.1 11.35 18.14 8.2 12.16 6.63 4.29 8.43
0.07 0.0 60.68 68.63 54.29 34.17 3.5 2.22 12.05 13.04 22.62 23.48 0.0 0.21 0.68 0.0
0.03 0.05 2.41 2.41 1.59 0.55 0.17 0.14 0.18 0.53 0.16 0.18 0.0 0.0 0.36 0.08
0.0 0.1 65.73 73.33 82.98 33.08 9.11 0.97 1.08 0.45 3.0 5.08 0.18 0.0 0.36 0.0
0.67 0.07 103.31 133.96 101.86 38.02 0.78 0.11 0.14 0.0 9.74 5.49 0.0 0.1 0.25 0.19
0.32 0.42 24.34 29.32 23.09 9.62 5.84 0.29 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.37 0.62 152.63 226.27 101.68 100.76 10.18 5.63 14.19 14.87 26.96 22.86 1.37 1.28 0.9 2.09

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)