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Heatmap: Cluster_142 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.17 -1.49 -0.31 0.24 -0.16 0.3 0.55 0.22 0.27 0.51 0.95 0.23 -0.31 -1.01 -1.74 -0.57
0.28 -2.0 -0.89 -0.46 -0.47 0.0 0.84 -0.41 -0.21 0.69 0.87 -0.53 0.47 -0.17 -0.87 0.23
0.09 -0.36 -0.49 0.14 -0.53 0.01 0.56 -0.26 0.28 0.27 0.53 -0.01 0.05 -0.29 -0.78 0.06
-0.07 -1.34 -0.27 0.09 -0.45 -0.13 0.81 0.05 0.22 0.32 0.86 0.36 -0.36 -0.59 -0.82 -0.34
0.25 -0.6 -0.35 -0.2 -0.19 0.08 0.57 0.15 0.28 0.13 0.77 -0.1 -0.04 -0.74 -1.12 -0.02
0.09 -0.44 -0.36 -0.04 -0.33 0.06 0.73 -0.08 0.04 0.81 0.51 -0.53 -0.09 -0.92 -1.21 0.26
-0.29 -1.65 -1.36 -0.53 -1.0 -0.53 0.53 -0.3 0.56 0.75 0.96 -0.06 0.41 -0.08 -0.64 0.43
0.25 -1.01 -0.44 -0.18 -0.37 -0.24 0.49 -0.33 -0.15 0.09 0.24 -0.42 0.44 0.29 -0.11 0.57
0.13 -0.88 -0.16 -0.05 -0.59 -0.36 0.42 -0.16 0.08 0.37 0.98 0.42 -0.07 -0.58 -1.35 0.2
-0.2 -1.05 -0.79 -0.24 -0.47 -0.38 0.22 -0.13 0.06 0.09 0.72 0.25 0.55 -0.08 -0.48 0.67
-0.66 -1.74 -1.52 -1.22 -1.09 -0.62 0.77 -0.55 -0.3 0.44 0.85 -0.06 0.79 0.47 0.31 0.59
0.33 -1.36 -1.41 -0.36 -0.5 -0.31 0.69 -0.06 0.42 -0.28 0.84 0.21 0.05 0.06 0.03 -0.15
-1.06 -2.17 -0.71 -0.44 -0.37 0.12 0.51 0.17 0.06 0.77 1.17 0.4 0.1 -0.52 -1.15 -0.01
-0.11 -0.67 -0.21 -0.05 -0.1 0.18 0.77 -0.08 0.11 0.28 1.04 0.71 -0.89 -1.34 -1.43 -0.71
0.14 -0.92 -0.36 0.02 -0.41 -0.12 0.48 0.07 0.24 0.22 0.62 0.1 0.1 -0.37 -0.71 0.06
-1.03 -2.87 -1.49 -1.12 -1.07 -0.39 -0.11 -0.51 -0.18 0.05 0.95 -0.46 1.3 0.58 -0.14 1.16
-0.29 -1.75 -0.52 -0.12 -0.42 -0.01 0.18 -0.06 -0.3 0.14 0.9 0.14 0.8 0.12 -0.73 0.18
-0.67 -1.43 -0.55 -0.4 -0.5 -0.13 0.05 -0.36 0.44 0.82 0.93 0.44 0.26 -0.32 -0.72 0.17
0.26 -0.66 -0.87 -0.3 -0.19 -0.15 0.54 0.21 0.56 0.41 0.87 0.21 -0.24 -1.01 -1.51 -0.1
-0.39 -1.49 -0.72 -0.19 -0.3 -0.35 0.78 -1.42 0.24 0.37 1.55 0.88 -0.51 -1.05 -1.37 -0.16
0.17 -0.79 -0.7 -0.23 -0.35 -0.15 0.83 -0.02 -0.22 0.76 0.88 -0.12 -0.16 -0.62 -0.96 0.03
- - -0.91 -2.06 -1.15 -1.38 0.62 -1.65 0.29 -0.25 1.2 0.57 0.59 0.25 1.28 0.64
0.26 -0.48 -0.63 -0.47 -0.23 -0.21 0.65 -0.12 0.15 -0.05 0.57 -0.31 0.34 0.05 -0.63 0.26
-0.03 -0.45 -0.74 -0.48 -1.05 -0.68 0.65 -0.46 -0.49 0.5 0.44 -0.2 0.46 0.32 0.07 0.63
0.16 -1.36 -0.63 -0.06 -0.8 -0.33 0.63 -0.14 0.2 0.15 1.21 0.54 -0.16 -0.48 -0.95 -0.15
-0.34 -0.46 -0.95 -0.08 -0.5 -0.76 0.58 -0.12 -0.05 0.39 0.52 0.08 0.26 0.06 -0.19 0.52
-0.18 -1.42 -1.2 -0.55 -0.77 -0.3 0.62 -0.12 0.36 0.85 0.84 -0.36 0.42 -0.16 -0.67 0.33
-0.32 -1.35 -1.06 -0.64 -1.19 -0.77 0.13 -0.04 -0.19 0.48 0.32 -1.15 0.92 0.61 0.16 1.07
0.06 -0.91 -0.47 -0.43 -0.79 -0.23 0.08 0.28 0.38 0.88 0.15 -1.01 0.45 -0.05 -0.3 0.45
0.25 -1.25 -0.54 -0.13 -0.37 -0.07 0.66 -0.15 -0.01 0.09 0.84 0.29 -0.11 -0.24 -0.31 -0.12
-0.16 -1.01 -0.82 -0.58 -0.52 -0.59 0.67 -0.13 0.74 0.69 0.76 0.45 -0.42 -0.5 -1.12 0.33
-0.33 -1.4 -0.43 0.3 -0.28 -0.02 0.39 0.06 0.48 0.45 1.01 0.22 -0.21 -0.8 -0.99 -0.32
-0.01 -1.2 -0.54 -0.4 -0.45 -0.06 0.38 -0.16 -0.13 0.22 0.9 0.14 0.69 -0.19 -0.85 0.19
-0.1 -0.43 -0.72 -0.14 -0.36 -0.2 0.56 -0.23 0.42 0.56 0.79 0.45 -0.34 -0.6 -0.83 -0.14
0.24 -0.41 -0.39 -0.12 -0.25 -0.19 0.39 -0.04 0.25 -0.15 0.56 0.12 0.14 -0.21 -0.79 0.24
0.19 -0.57 -1.03 -0.4 -0.49 -0.39 0.98 -0.19 -0.03 0.9 1.01 0.1 -0.28 -1.07 -1.35 -0.01
-0.49 -1.17 -1.42 -1.63 -0.32 -1.27 0.51 -0.68 0.21 0.55 1.0 0.4 0.51 -0.18 -1.14 1.14
0.21 -0.48 -0.77 -0.32 -0.63 -0.73 0.2 -0.41 0.02 -0.48 0.28 -0.13 0.91 0.51 -0.62 0.82
0.29 -0.78 -0.39 0.19 -0.5 -0.21 0.96 -0.08 0.5 0.61 0.87 0.43 -1.07 -1.38 -1.92 -0.73
-0.2 -2.09 -1.15 -1.0 -0.81 -0.37 0.22 -0.48 -0.21 -0.01 0.68 -0.22 1.14 0.43 -0.5 1.1
-0.27 -1.01 -0.66 -0.4 -0.18 0.04 0.31 0.03 0.2 0.45 1.0 0.08 0.43 -0.42 -1.25 0.02
-0.21 -1.2 -0.95 -0.35 -0.61 -0.24 0.31 -0.28 0.06 -0.01 0.75 0.32 0.71 0.09 -0.07 0.28
-0.77 -2.35 0.26 -0.39 -0.41 0.21 0.88 0.21 0.31 0.66 1.56 0.81 -1.65 -2.11 -3.13 -2.64
-0.42 -1.11 -0.71 -0.79 -0.32 -0.13 0.53 -0.24 -0.12 0.35 0.99 0.24 0.37 -0.18 -0.67 0.51
0.02 -0.46 -0.68 -0.42 -0.41 -0.22 0.87 -0.3 0.01 0.68 0.78 0.23 -0.25 -0.44 -1.22 0.18
-0.07 -1.24 -1.19 -0.8 -0.33 -0.14 0.79 -0.19 0.25 1.02 0.88 0.22 -0.3 -0.29 -0.89 -0.16
0.1 -1.0 -1.12 -0.5 -1.29 -0.27 0.49 -0.1 -0.03 0.45 0.48 -0.38 0.65 0.29 -0.97 0.91
-1.47 -4.19 -2.39 -1.5 -0.64 -1.17 0.5 0.07 0.09 0.93 1.29 0.28 1.01 0.14 -0.78 0.2
-0.65 -1.46 -2.18 -2.0 -2.6 -3.19 0.7 -0.12 0.53 0.94 1.39 0.39 0.71 -0.33 -0.7 0.45
-1.89 -3.86 -0.73 -0.37 -1.03 -0.32 0.49 -0.02 -0.07 0.41 0.89 0.28 0.78 0.28 -0.38 0.63
-1.84 -3.14 -2.06 -1.68 -2.27 -1.17 0.31 -0.56 -1.22 -0.07 0.98 0.32 1.49 0.96 0.02 1.07
0.16 -0.97 -0.77 -0.22 -0.6 -0.66 0.5 0.07 0.21 0.15 0.73 -0.03 0.52 -0.03 -0.56 0.23
0.36 -0.96 -0.2 -0.2 -0.12 -0.22 0.63 -0.45 -0.06 0.34 0.45 -0.35 0.31 -0.25 -0.34 0.2
-1.03 -1.72 -0.45 -0.35 -0.32 -0.22 0.38 -0.24 0.37 0.42 0.78 0.39 -0.01 0.34 -0.36 0.25
0.15 -0.51 -0.34 -0.47 -0.41 -0.26 0.54 0.12 0.36 1.08 0.66 -0.13 -0.74 -0.66 -0.61 -0.37
0.07 -0.77 -0.63 -0.16 -0.41 -0.12 0.55 -0.33 0.47 0.65 1.07 0.07 -0.47 -0.66 -0.94 -0.13
-0.75 -0.25 -0.52 -0.08 -0.04 -0.5 0.62 -0.04 0.27 1.0 1.07 0.56 -0.95 -1.25 -2.3 -0.29
-0.01 -0.65 -0.69 -0.19 -0.58 -0.08 0.41 -0.12 0.16 0.23 0.81 -0.33 0.31 -0.0 -0.77 0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.