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Heatmap: Cluster_325 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.78 -0.67 -1.7 -1.2 -0.97 -1.18 0.1 -0.02 0.66 0.66 0.35 0.23 0.58 0.58 -0.35 0.73
-0.21 -0.64 -1.36 -0.91 -0.9 -0.25 0.44 -0.02 0.9 0.93 1.0 0.61 -0.34 -0.86 -1.38 -0.25
0.24 0.39 -2.07 -1.18 -1.25 -1.2 0.11 -0.32 1.05 1.07 0.76 0.31 -0.21 -0.46 -0.89 -0.19
-1.1 -0.68 -2.61 -2.27 -0.91 -1.23 -0.59 -1.06 -0.04 -0.4 -0.9 -1.16 1.49 1.36 0.47 1.57
0.22 -0.71 -0.78 -0.85 -0.88 -0.37 -0.07 -0.56 0.38 0.05 0.19 -0.47 0.73 0.5 -0.11 0.96
-0.45 -2.94 -3.64 -2.89 -2.39 -2.13 -1.08 -0.45 0.48 0.34 -0.37 0.23 0.91 0.96 1.51 1.03
0.1 -1.02 -2.24 -2.07 -2.31 -2.81 -0.17 -0.09 0.98 0.73 0.44 0.51 0.49 0.27 -0.03 0.84
-0.79 -0.26 -2.38 -1.65 -1.77 -0.85 0.48 0.27 1.51 1.42 1.18 0.33 -1.06 -1.85 -3.02 -0.54
-0.09 -0.44 -1.52 -1.1 -1.37 -1.05 0.78 0.12 1.38 1.06 0.51 0.48 -0.64 -1.1 -1.43 -0.22
0.68 -0.15 -0.81 -1.05 -1.28 -0.78 0.1 -0.86 0.84 0.43 0.06 0.21 -0.18 -0.22 0.52 0.39
0.26 0.05 -0.75 -0.25 -0.26 -0.24 0.36 0.11 0.75 0.37 0.14 -0.12 -0.2 -0.57 -0.86 0.27
0.73 0.69 -3.04 -3.28 -0.92 -4.64 0.43 -0.42 1.61 0.95 1.13 0.44 -1.72 -0.82 -1.75 -2.84
-0.3 -0.6 -0.84 -0.53 -0.21 -0.17 0.19 -0.27 0.94 1.08 0.97 0.64 -1.01 -1.46 -1.72 -0.29
0.07 -0.68 -1.36 -1.16 -0.58 -0.32 0.38 -0.31 0.89 0.58 0.41 -0.13 0.58 -0.19 -0.73 0.42
-0.29 -1.4 -2.94 -1.85 -0.73 -0.42 0.19 -0.55 0.91 1.31 1.46 0.6 -0.3 -0.85 -1.45 -0.23
-0.48 -1.55 -1.24 -1.38 -0.95 -0.69 0.69 -0.26 1.11 1.12 1.13 0.54 -0.44 -0.96 -1.0 -0.29
1.23 -1.3 -2.63 -2.48 -1.18 -1.69 1.25 -0.64 1.84 1.2 0.3 -0.4 -1.39 -1.69 -2.06 -1.6
-0.29 -0.31 -1.3 -0.68 -1.28 -0.92 0.43 0.04 0.85 0.83 0.72 0.37 -0.25 -0.41 -0.45 0.24
-0.88 -0.47 -0.73 -0.26 -0.63 -0.58 0.49 -0.15 0.8 0.78 0.99 0.63 -0.3 -0.98 -1.07 -0.18
-0.68 -1.92 -1.41 -2.07 -1.81 -1.52 0.2 -0.69 0.03 0.39 0.28 -0.22 1.05 0.9 0.76 1.04
-0.4 0.27 -1.62 -1.71 -0.86 -0.62 -0.13 0.01 1.22 0.94 0.78 0.75 -0.33 -0.68 -1.44 -0.22
-0.0 -0.9 -0.86 -0.49 -0.58 -0.8 0.23 0.03 1.21 0.68 0.74 -0.34 0.27 -0.66 -1.22 0.19
-0.17 0.07 -1.32 -0.92 -1.73 -0.79 0.02 -0.46 1.33 1.09 0.95 0.63 -1.07 -0.87 -0.77 -0.39
-0.1 -0.7 -1.18 -0.96 -0.46 -0.33 0.63 0.33 1.18 0.99 0.38 0.07 -0.34 -0.7 -1.06 -0.59
0.31 -1.27 -1.54 -1.58 -1.23 -0.76 -0.01 -0.53 0.97 0.66 0.25 -0.7 0.66 0.66 0.01 0.54
-0.07 0.72 -3.35 - -0.27 -2.34 -0.1 -1.64 1.5 0.46 0.52 -0.44 0.11 1.34 -0.5 -1.6
-1.03 0.32 - - -1.6 -1.19 0.26 0.32 1.52 0.41 0.72 -0.46 0.53 -0.12 -0.35 0.41
-0.11 0.18 -2.04 -2.09 -1.16 -0.62 0.03 -0.37 1.18 0.5 0.83 0.38 0.16 -0.35 -0.35 0.19
-0.48 0.28 -2.44 -1.39 -1.26 -0.28 0.38 -0.19 1.41 1.06 1.35 0.37 -1.69 -1.25 -1.02 -1.91
-0.51 -1.27 - - -2.35 -1.63 -0.2 -1.12 1.22 1.02 1.31 -0.14 0.86 0.02 -0.71 0.89
-0.1 - - - -0.75 -1.81 0.62 0.09 1.85 1.16 0.53 -0.49 0.21 -0.3 -2.17 0.47
-0.2 -1.08 -1.6 -2.24 -2.95 -1.64 0.41 0.24 1.13 0.32 0.09 -0.25 0.7 0.67 0.0 0.66
0.53 -0.03 -1.57 -1.67 -1.1 -0.78 0.44 -0.57 1.17 0.76 0.38 0.05 -0.08 -0.18 -0.75 0.21
0.05 0.01 -1.04 -0.79 -0.71 -0.39 0.47 -0.44 0.79 0.54 0.51 0.16 0.13 -0.38 -0.98 0.36
0.09 0.08 -1.28 -0.64 -1.26 0.23 0.06 0.31 1.27 0.7 0.74 -0.26 -0.55 -0.79 -0.97 -0.64
-0.28 -0.98 -1.22 -0.93 -0.63 -0.27 0.37 0.03 0.92 0.89 1.0 0.7 -0.44 -0.58 -1.13 -0.53
-0.06 -0.31 -0.61 -0.41 -0.5 -0.21 0.13 -0.79 0.86 0.97 0.68 0.25 -0.26 -0.9 -0.5 -0.11
0.34 -1.18 -0.55 -0.51 -1.56 -1.02 0.37 -2.1 1.21 0.81 1.43 0.26 -0.09 -0.93 -1.1 -0.61
0.23 -0.0 -1.36 -0.97 -0.87 -0.61 0.35 -0.15 1.24 0.87 1.0 0.7 -1.32 -1.37 -1.52 -0.74
0.07 -0.63 -0.81 -0.47 -0.28 -0.71 0.28 -0.61 1.08 0.62 0.85 0.24 -0.31 -0.56 -0.99 0.13
0.18 0.06 -0.74 -1.02 -0.65 -0.2 0.03 -0.29 0.87 0.2 0.61 -0.72 0.54 -0.2 -0.8 0.45
-0.29 -0.57 -2.57 -1.81 -2.19 -1.48 0.09 -0.06 1.5 -0.14 0.79 -0.9 0.9 -0.03 -0.6 0.97
-0.11 -0.23 -1.9 -1.29 -1.75 -0.99 0.2 -0.69 1.56 1.16 1.16 0.63 -0.79 -1.27 -2.16 -0.34
-1.12 -0.32 -3.32 -4.25 -1.42 -1.61 -0.4 -0.96 0.57 -0.58 -0.64 -1.12 1.78 0.74 -0.44 1.81
0.01 -1.36 -1.19 -1.63 -1.36 -0.98 -0.21 -0.65 0.95 0.35 0.15 0.22 0.53 0.55 0.69 0.53
-0.02 0.03 -0.65 -0.71 -0.53 -0.23 0.48 -0.04 0.69 0.65 0.83 0.02 -0.32 -0.51 -1.63 0.05
-0.3 0.38 -0.99 -0.11 -0.28 -0.07 0.31 -0.2 0.94 0.47 0.72 0.57 -0.65 -1.2 -2.73 -0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.