1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_168 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- 3.19 0.86 - - - 1.18 - 1.47 - - - - - - -
- 0.05 1.95 - - 2.7 - - - - - - 1.25 1.16 - -
0.21 1.35 -0.47 0.2 -0.04 0.52 -0.56 -3.59 -1.85 - -1.75 -1.86 0.43 0.92 0.4 0.89
- 3.68 - - - - - - 1.68 - - - - - - -
0.02 2.77 -0.61 -0.26 -1.5 2.28 -0.29 -0.67 - - - - - - - -
0.22 1.48 -0.46 0.8 -0.19 1.55 -1.5 -1.56 -3.02 -2.97 -0.34 -0.71 -1.73 -0.83 0.25 0.47
-0.8 0.53 -1.77 -1.23 -0.43 0.23 -1.2 -1.32 -1.06 0.0 -2.36 -0.88 1.51 0.91 0.19 1.27
-0.53 1.19 -0.88 -1.31 0.12 0.83 -1.75 -0.64 -4.54 -4.59 -2.41 -1.96 1.09 1.11 1.02 0.52
- 1.2 - - - 0.18 - - - - - - - 2.02 3.09 -
1.23 3.45 - - - - - 1.44 - - - - - - - -
- - - - 1.1 3.74 - -0.93 - - - - - - - -
- 0.8 1.11 -0.88 -1.08 2.56 - - -0.63 - -0.54 -0.64 - - 1.67 -
- 2.19 - - 1.42 2.28 - - - 1.97 - - - - - -
-0.01 0.87 -0.04 -1.46 -0.0 0.72 -0.05 -0.41 -0.6 0.49 -0.5 -0.48 0.15 -0.15 0.02 -0.03
- -3.39 - - - - - - - - - - 1.45 1.64 2.43 2.22
-0.16 2.5 -2.32 -2.99 0.57 1.49 -2.67 - 1.16 -0.37 -0.33 -3.76 -2.41 -1.92 - -1.53
- 0.73 0.29 0.03 - - - -3.95 -0.72 -0.66 - - - 1.84 1.59 2.07
-2.91 2.55 - -1.77 1.03 1.45 -1.77 - 0.06 - -1.43 - - 0.71 - 0.69
0.62 1.04 - - - -0.32 -0.98 -1.18 -0.69 -0.64 - - 0.6 -0.49 1.58 2.06
- 3.05 - - - 1.58 - - - 2.25 - - - - - -
-1.43 2.59 -0.37 -2.84 1.73 1.74 -1.05 -2.46 - - - - -2.27 -1.48 -1.3 -1.28
- - - - - 4.0 - - - - - - - - - -
0.19 1.57 -1.57 -1.4 -0.25 1.47 -0.62 -1.52 -0.31 -0.22 -1.85 -1.92 -0.32 0.28 0.44 -0.02
-3.88 1.71 - - 1.53 0.49 - - - - - - 1.74 1.42 - 1.23
- 1.02 - - -0.19 0.25 - - -0.7 0.35 - 0.28 1.59 1.5 1.57 -
-0.93 1.27 -0.83 -0.6 0.69 1.1 -4.13 -1.78 -1.51 -2.01 -2.05 -1.52 1.03 1.39 -0.71 0.32
-0.9 1.05 -2.35 -2.0 -0.11 0.01 -2.19 -2.48 -1.24 -1.41 -2.95 -3.06 0.81 1.12 1.2 1.74
- - - - - 4.0 - - - - - - - - - -
0.98 1.98 -0.29 0.72 0.42 2.09 -2.77 -1.93 -4.91 -4.86 - - -0.65 -1.74 -1.67 -1.77
- 1.41 -1.82 -2.07 0.9 1.42 - -6.06 - -2.77 - - 1.68 0.22 1.07 0.71
-1.8 0.31 -1.23 -2.11 -0.84 0.17 -1.81 0.12 0.05 -0.21 -2.24 -1.81 1.2 0.93 0.61 1.39
-2.06 -0.82 -2.27 - 0.18 -0.72 -1.36 -1.6 - - - -0.71 -0.36 2.35 2.2 0.52
- 2.31 - - - 2.0 - - - - - - - 2.82 - -
- 1.76 0.53 -0.95 -0.57 1.81 -3.95 - 1.29 1.74 -2.62 -1.14 - - - -
- 3.34 - - - - - - - - - 2.55 - - - -
-0.41 0.84 -0.81 -0.69 -0.32 0.46 -1.79 -1.84 -3.82 -5.78 -2.54 -2.83 1.16 1.79 0.82 0.72
- 2.63 - - 3.3 - - - - - - - - - - -
-0.85 0.16 -1.42 -3.06 -0.63 -0.51 -4.14 -4.03 -3.8 -3.76 - -2.81 1.27 2.01 1.02 1.86
- -4.89 - - - - - - - - - - 2.45 1.94 1.94 1.52
- 3.12 - - - 2.87 - - - - - - - - - -
- 2.43 - - 2.06 1.89 - 1.46 - - - - - - - -
- -2.02 - - - -2.02 - -7.01 - - - - 1.28 1.84 2.56 1.85
-2.2 -0.63 -0.42 0.23 -0.29 1.79 -0.51 -0.32 - - -1.76 -0.28 0.49 1.86 - 0.37
-0.01 0.86 -1.16 -0.91 -0.16 0.22 -1.36 -0.8 -0.97 -2.1 -1.56 -1.98 0.97 0.84 1.32 0.69
-1.51 0.88 -2.95 -2.62 -0.64 0.65 -7.87 -1.13 -3.18 -1.93 - -5.06 2.01 1.84 -0.5 1.08
- 2.46 - - - -0.49 - -3.19 1.73 - 0.24 - - - 2.37 -
-1.39 0.99 -1.41 -0.56 -0.49 0.37 -2.5 -1.28 -2.26 -1.68 -0.36 -1.48 1.72 0.71 -0.77 1.49
-2.09 2.78 -1.57 -2.56 2.35 1.39 -4.56 -6.54 - - - - - -3.07 -1.0 -
-0.77 -0.0 -1.57 - -0.58 -0.53 -1.79 -3.11 -3.44 -4.38 -3.35 -2.45 1.53 1.57 1.76 1.4
- 2.58 - - - - - - - - - - - 3.32 - -
0.63 1.29 -0.43 - - -0.07 -0.62 -1.79 - - -3.04 -3.15 0.15 1.45 1.45 1.35
-2.6 1.58 -1.42 0.33 1.31 1.58 -1.68 - -2.42 - -2.33 - 0.27 -1.06 -0.12 1.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.