Heatmap: Cluster_341 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - -2.71 - -1.58 -0.16 -3.38 3.86 - - - - - - - -
-5.02 -4.77 -4.23 - - - -5.91 1.55 - - -4.57 - 1.63 1.42 2.24 1.26
- - - - - -0.88 -3.1 3.94 - - - - - - - -
- - -0.78 - -3.47 -2.03 -2.68 3.89 - - -2.89 - - - - -
- - - - - -3.03 -4.08 0.73 - - - - 1.96 3.15 - 0.49
-2.5 - -3.54 -3.22 -2.09 -0.88 -1.75 3.79 - - -3.89 -2.41 -1.63 - - -2.75
- - -5.14 - -2.69 -1.27 -1.29 3.08 - - - - -1.06 -0.04 1.0 1.63
-3.68 - -4.11 -6.64 -4.51 -3.69 -3.18 1.55 - - -4.85 -6.1 2.22 1.91 -0.3 1.77
- - - - -2.51 - -2.32 3.97 - - - - - - - -
-3.13 - -3.09 -3.34 -0.84 -1.39 -2.17 3.84 - - - - - - - -2.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.