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Heatmap: Cluster_250 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-2.51 1.53 -0.07 0.1 -0.77 0.46 1.76 -0.34 -1.2 -0.39 0.4 0.73 -2.53 -2.21 - -2.24
0.26 0.71 -1.03 -0.82 -0.48 0.19 0.9 -0.21 -0.57 -0.78 0.24 0.52 -0.22 -0.12 -0.13 -0.05
-0.78 1.04 0.15 0.25 0.57 0.5 0.04 -0.09 0.26 -0.16 -0.18 0.41 -1.11 -1.02 -1.51 -0.78
-0.74 1.71 0.37 -0.13 0.06 0.39 -0.17 -0.95 -1.06 -1.05 0.1 0.11 -0.13 -0.69 -0.54 -0.26
- 1.7 0.57 - -1.88 -1.05 - 0.34 -0.44 - 0.97 0.13 -0.1 - 1.88 -0.22
-1.15 1.35 0.21 -0.29 -0.88 -2.15 -1.82 -0.94 0.51 -1.34 0.17 -0.08 0.38 -0.62 0.35 1.23
0.77 0.06 -0.31 -0.41 0.06 1.1 -0.01 -2.01 -0.08 -1.62 0.63 0.7 -0.34 -1.12 -0.51 -0.2
-1.94 2.05 -1.09 -2.22 -0.37 1.37 0.77 0.78 -0.66 -3.33 0.02 0.97 -2.05 -3.14 - -3.76
0.02 0.04 -0.77 -0.66 0.13 -0.05 -0.03 -1.18 -0.22 -0.24 0.13 -0.2 0.43 0.47 0.51 0.53
0.45 1.32 -0.52 0.31 0.54 1.16 0.45 0.79 -7.49 -8.43 0.42 0.89 -4.57 -4.34 -4.18 -3.82
-1.33 1.87 -1.43 0.19 -1.32 1.72 -1.41 -3.06 0.88 -0.51 1.32 0.12 -4.16 -4.97 -5.74 -5.74
-1.05 0.15 -0.13 -0.54 -0.39 -0.86 0.7 -0.54 -0.33 -0.86 -0.62 -0.34 0.72 0.93 -0.14 0.95
-0.42 0.6 -0.83 -0.45 0.72 -0.08 0.75 -2.37 -0.7 -0.72 0.71 0.93 -0.52 -0.37 -1.0 0.31
-0.28 0.57 -0.92 -1.12 -0.61 -0.17 0.52 -0.87 -1.93 -1.95 0.13 0.09 0.69 0.73 0.58 0.79
-0.26 -0.84 -1.38 -1.59 -1.01 -0.45 -0.13 -0.65 -1.75 -3.6 -0.61 -0.68 1.76 1.2 0.61 1.15
-0.21 0.94 -0.42 0.11 -0.05 0.35 0.97 -0.48 -0.79 -0.53 0.62 0.33 -0.71 -1.09 -0.84 -0.41
0.63 0.6 -0.14 0.12 -0.16 0.42 0.13 -0.92 -0.04 0.19 0.36 0.26 -0.61 -1.04 -1.27 -0.09
-1.42 -0.47 -0.7 -1.53 -0.62 -0.26 -0.21 -1.5 -1.35 -1.17 -0.17 -1.36 1.49 1.01 1.21 0.98
0.72 0.69 -0.83 -0.67 0.01 0.16 0.28 -0.18 0.56 -0.58 0.91 -0.73 -0.91 -0.53 -0.44 -0.43
0.75 0.67 -0.81 -0.2 -0.77 0.45 0.54 -1.34 -1.0 -1.25 0.19 0.06 0.15 -0.02 0.17 0.2
- 1.96 0.39 -0.27 - 1.36 - - - 0.03 1.65 -0.04 - - - 1.17
-0.42 1.86 -0.24 -0.16 0.28 -2.53 0.85 -2.13 - - -0.17 0.89 0.31 0.46 -0.98 -0.7
-2.66 1.62 -0.1 0.06 0.19 0.5 0.46 -0.69 0.41 0.18 0.68 0.49 -4.73 -2.24 -1.75 -2.05
-2.0 1.34 -3.8 -0.66 -3.67 -0.25 -0.47 0.47 0.09 -0.17 0.67 -0.24 -1.88 0.02 0.09 1.45
-1.55 1.65 0.28 -0.68 -0.11 0.59 2.06 -4.67 -3.76 - -2.66 0.99 - -1.52 0.56 -
1.23 0.14 0.74 -0.34 1.03 1.59 -0.13 -2.61 -0.68 - -1.58 - - 0.55 0.62 -
-0.29 1.28 -1.93 -1.57 -0.95 0.67 0.04 -1.06 -0.02 -1.03 0.23 0.14 0.45 0.61 -0.23 0.05
-3.18 1.0 -0.33 0.19 -0.29 1.91 1.66 -1.87 -2.15 -1.96 0.57 0.09 -1.85 -2.15 -2.62 -2.05
0.31 0.37 -0.13 0.11 0.26 0.12 0.3 -0.11 0.49 0.24 0.59 0.15 -1.0 -1.27 -1.08 -1.16
0.39 0.37 - - -0.05 0.73 0.27 -0.12 - -2.28 -0.65 -0.35 0.52 1.3 -0.09 1.13
0.01 -0.36 0.2 -0.39 0.82 1.41 0.61 -0.33 -0.3 - - -2.48 0.87 -0.42 0.43 -0.67
-1.5 1.36 0.11 0.35 0.03 1.12 1.85 -1.44 - -7.02 0.57 0.88 -4.16 -5.25 - -2.86
-3.83 1.53 -1.06 -3.73 -0.92 1.93 1.36 -0.24 -1.49 -3.43 -0.59 -0.91 -2.14 -0.65 1.16 -
-4.32 0.64 0.33 -0.71 -0.99 1.57 1.77 0.21 -0.74 -0.37 0.21 0.97 -6.84 -9.74 - -9.77
0.02 -0.21 -0.62 -0.71 -0.33 -0.23 0.24 -0.51 -0.83 -1.58 0.36 -0.43 0.88 0.4 0.58 0.81
-4.22 0.45 -2.51 -2.89 -2.23 0.57 -3.4 -3.04 -1.38 -0.02 0.02 0.1 0.72 1.49 1.73 0.17
0.7 1.23 -0.83 -0.37 0.82 0.07 1.58 -1.81 -4.12 -4.06 0.75 0.7 -1.79 -2.3 -1.82 -1.33
0.72 0.53 -0.52 -0.05 0.16 0.12 0.32 -0.18 0.08 0.15 0.42 -0.71 -0.41 -0.82 -0.81 -0.14
-4.19 1.99 0.16 0.24 0.5 0.84 0.44 0.66 -3.02 -3.96 0.18 0.94 -2.91 -4.3 -6.4 -3.17
-6.02 -2.11 -4.88 -4.09 -3.66 -2.97 -3.74 -4.41 -6.14 -9.25 -2.97 -3.28 2.41 2.33 0.85 1.55
-0.52 0.13 -2.31 -1.29 -0.54 0.03 0.24 -0.97 -1.29 -1.91 -1.36 -1.43 1.27 1.46 0.89 0.81
-0.4 0.77 -0.74 -0.83 -0.75 0.49 0.28 -0.86 -1.42 -1.32 -0.19 -0.27 0.58 0.72 0.63 0.53
0.22 0.42 -0.22 0.01 0.48 0.38 0.64 -0.44 -0.33 -0.41 0.54 0.43 -0.61 -0.97 -0.89 -0.76
0.12 0.43 -0.08 0.01 -0.07 -0.41 0.83 -0.76 -0.57 -0.94 -0.06 0.4 0.13 -0.16 -0.31 0.33
-0.41 0.93 -0.68 -0.61 0.22 0.78 0.47 -0.01 -1.07 -0.4 0.79 -0.13 -0.05 -0.68 -0.73 -0.45
-1.88 0.39 0.2 -0.06 -0.6 2.22 1.75 -0.63 -2.55 -2.2 0.07 -0.88 -2.0 -1.55 - -1.36
-0.21 -0.06 -0.77 -0.92 -0.22 -0.24 0.17 -0.77 -1.07 -2.27 -0.11 -0.09 1.08 0.93 0.51 0.71
0.25 -0.05 -0.76 -0.57 0.08 -0.21 0.07 -1.02 -0.52 -0.69 0.32 -0.02 0.69 0.57 -0.26 0.72
-0.03 0.35 -0.91 -0.12 -0.04 0.49 0.44 -1.28 -0.02 -0.34 -0.27 0.37 0.57 -0.18 -1.28 0.56
-0.63 -0.41 -1.24 -1.14 -0.61 -0.32 -0.27 -1.43 -1.52 -3.84 -0.65 -0.6 1.45 1.55 0.88 0.91
-2.07 1.93 -0.78 0.18 0.79 0.84 -2.0 0.42 -4.53 -4.47 1.26 1.1 - -4.28 -2.21 -2.24
-0.33 -0.1 -1.58 -2.04 -1.44 -0.11 -0.36 -0.71 -3.25 -3.87 -2.12 -2.02 1.29 1.29 1.57 1.31
-4.53 1.69 -0.85 0.04 0.44 1.56 1.64 -1.35 -1.15 0.14 -1.06 -0.28 -5.08 -4.8 -1.47 -4.72
0.04 0.5 -1.14 -0.52 -1.42 0.46 0.48 -0.49 -1.76 -4.02 -0.5 -0.51 0.94 1.15 -1.02 1.1
-0.89 0.92 0.49 -0.1 -0.01 0.07 0.35 0.54 -1.23 -1.48 -0.28 -0.07 -0.4 0.1 -0.43 0.41
-1.94 1.9 -0.02 0.34 0.43 -0.39 0.53 0.27 -3.43 -3.93 -0.0 1.34 -1.33 -2.1 -2.67 -0.94
- 2.32 0.11 - - 2.67 1.76 -2.55 - - - - - - - -
-1.33 1.04 -2.08 -1.69 -1.59 0.27 0.06 -1.01 -0.33 -0.32 0.58 0.18 0.73 0.07 0.26 0.84
-1.18 1.31 0.38 -0.13 -0.48 0.73 -0.51 0.94 -1.55 -5.08 0.63 0.29 -1.08 -0.66 0.05 -0.77
-1.27 1.37 -0.1 0.2 -0.04 0.49 -0.28 -0.75 -4.78 -1.62 0.28 0.55 0.18 -1.14 -1.06 1.01
0.61 1.11 -0.82 -0.72 -0.13 1.2 1.01 -0.63 -0.89 -1.41 -0.15 -1.22 0.1 -0.79 -2.39 0.23
-2.41 1.96 0.21 0.16 -1.13 1.42 0.57 -2.27 0.72 -2.8 0.32 0.38 -2.52 -1.61 - -
-0.7 -0.11 -1.29 -0.49 -0.29 0.31 -0.46 -0.64 -1.89 -1.57 -0.62 -1.14 1.03 1.01 1.41 0.57
0.04 1.17 -0.3 -0.17 0.54 1.08 1.34 -1.56 -0.55 -1.43 0.71 0.49 -3.14 -2.86 -2.91 -3.27
0.61 1.67 -2.75 -3.74 -1.36 1.18 1.49 -0.12 -0.6 - 1.15 0.77 - -3.26 - -
- 1.89 -1.83 -2.5 -1.12 1.65 2.65 -5.49 - - 0.78 -2.03 - - - -
-2.63 1.92 -1.75 - -1.63 1.22 -1.43 -0.62 - -0.09 1.27 1.42 - - - 1.03
-1.88 -1.13 -0.33 0.35 0.76 2.29 1.9 -1.27 -1.72 -2.6 0.17 -0.24 - - -4.81 -
-1.47 0.63 -3.15 -1.91 -3.49 -0.27 0.34 -1.31 -3.15 -2.47 -0.16 0.35 1.52 1.26 -1.11 1.56
- 0.33 -0.38 -1.32 -0.75 -0.11 -1.81 0.89 - -1.83 -0.21 -1.9 2.15 0.05 -0.58 1.23
-0.03 1.92 -0.89 0.45 -0.19 1.31 0.48 -1.43 -2.84 -3.69 0.32 -0.56 -0.46 -1.15 -2.56 -0.48
-2.16 1.65 -0.28 -0.72 -0.93 -1.33 0.94 -2.05 -2.44 -1.89 0.53 1.4 -1.15 0.42 0.08 -0.43
-2.43 0.98 -1.55 -1.45 -0.4 0.41 -0.92 -1.58 -2.16 -4.16 -0.36 0.47 -0.16 1.18 2.06 -1.27
0.28 -0.32 -0.96 -1.4 -0.08 0.49 0.36 -0.75 -0.63 -2.26 -0.1 -0.04 0.02 0.53 0.79 0.95
-1.71 1.12 -0.63 -1.09 -1.02 1.32 1.8 0.23 -1.17 0.26 0.49 0.58 -2.79 -6.3 - -3.74
0.27 -0.64 -3.48 -2.75 -0.76 1.18 0.24 -1.16 -2.09 -1.85 0.54 0.56 1.09 0.76 -0.38 0.47
-4.34 1.95 0.62 0.4 0.9 0.87 0.4 1.22 -3.57 -3.62 -2.7 0.61 -8.07 -7.16 -6.09 -6.19
- 2.29 1.43 -0.46 -0.26 0.97 - -1.44 - -0.61 0.6 -0.17 - - 0.54 -
0.63 0.25 -1.69 - 0.76 1.57 0.79 0.05 - - - - 0.9 0.19 0.19 0.47
0.02 0.57 -0.01 0.28 0.54 0.66 0.48 -0.14 0.12 -0.0 0.47 -0.49 -0.68 -1.55 -2.17 -0.76
0.01 0.4 -0.74 -0.15 -0.03 -0.58 0.11 -0.22 0.48 0.08 0.19 -0.27 0.33 -0.27 -0.42 0.4
0.6 0.53 -0.47 0.15 0.05 0.11 0.26 -1.02 -0.0 0.61 0.27 0.46 -0.69 -1.1 -1.49 -0.23
-1.21 1.59 0.68 0.41 -0.25 0.41 -0.24 -2.17 -8.48 - 0.32 0.38 0.18 -0.64 -0.54 0.45
-1.38 0.18 -1.11 -0.95 -0.69 -0.22 -0.2 -1.02 -1.61 -1.49 -2.88 -1.82 1.2 1.98 0.74 0.73
0.41 0.12 -0.09 0.01 -0.11 0.24 0.28 -0.46 -0.38 -0.29 0.34 0.12 0.01 -0.25 -0.26 -0.05
0.13 -0.28 -0.45 -0.44 -0.28 0.04 -0.05 -0.83 -0.6 -0.81 0.48 0.11 0.53 0.5 -0.25 0.87
0.27 -0.96 -1.34 -1.16 -0.59 -0.7 -0.63 -1.66 -1.04 -1.04 0.27 -0.3 0.8 1.01 0.81 1.43
-0.33 0.41 -0.8 -0.04 -0.22 0.03 0.51 -1.47 -0.66 -1.01 0.27 0.4 0.27 0.17 0.02 0.74
0.08 0.51 -0.37 0.12 -0.16 0.11 0.1 -0.46 -0.25 -0.28 0.38 0.03 0.19 -0.19 -0.23 0.04
-1.66 1.07 -0.02 0.57 0.24 0.55 1.04 0.46 -1.14 -1.38 0.65 0.78 -1.92 -1.78 -3.03 -2.05
0.36 0.79 -0.09 -0.62 0.27 -0.1 0.77 -0.68 -1.12 -0.46 -0.39 0.44 -0.2 -0.43 -0.1 0.1
-0.08 0.44 -0.88 -1.41 -0.42 0.12 0.38 -0.39 -0.97 -1.44 -0.43 -0.68 0.68 0.85 0.59 0.78
0.25 0.09 -0.55 -1.15 -0.47 0.29 -0.16 -0.87 -0.37 -0.78 -0.96 -0.63 0.49 0.53 1.24 0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.