1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_250 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.45 7.43 2.46 2.77 1.52 3.56 8.73 2.04 1.12 1.97 3.42 4.27 0.45 0.56 0.0 0.55
195.46 265.75 79.54 92.1 116.39 185.62 304.95 140.69 109.76 94.92 192.17 232.81 139.35 150.03 149.28 156.9
62.32 219.87 118.54 127.18 159.61 152.06 110.31 100.66 128.24 95.97 94.94 142.69 49.66 52.87 37.66 62.63
11.85 64.37 25.45 18.02 20.56 25.88 17.52 10.23 9.49 9.5 21.09 21.24 18.08 12.26 13.55 16.46
0.0 0.38 0.18 0.0 0.03 0.06 0.0 0.15 0.09 0.0 0.23 0.13 0.11 0.0 0.44 0.1
1.88 10.62 4.84 3.41 2.27 0.94 1.18 2.18 5.94 1.66 4.7 3.94 5.44 2.71 5.35 9.82
16.35 9.99 7.77 7.24 9.98 20.62 9.56 2.38 9.06 3.13 14.84 15.63 7.61 4.42 6.75 8.33
0.33 5.27 0.6 0.27 0.98 3.29 2.17 2.18 0.81 0.13 1.29 2.48 0.31 0.14 0.0 0.09
31.91 32.31 18.41 19.99 34.52 30.36 30.82 13.89 26.97 26.69 34.51 27.34 42.5 43.5 44.96 45.45
25.26 46.25 12.93 22.98 26.87 41.42 25.36 32.0 0.1 0.05 24.87 34.36 0.78 0.91 1.02 1.31
18.49 170.42 17.32 53.05 18.69 153.06 17.51 5.57 85.74 32.72 116.06 50.54 2.6 1.48 0.87 0.87
1.87 4.31 3.54 2.67 2.97 2.13 6.31 2.67 3.08 2.14 2.52 3.06 6.37 7.39 3.51 7.49
6.68 13.55 5.04 6.56 14.78 8.45 15.08 1.74 5.52 5.44 14.61 17.04 6.26 6.92 4.47 11.14
26.67 48.07 17.14 14.87 21.3 28.84 46.36 17.78 8.47 8.38 35.49 34.53 52.34 53.59 48.39 56.13
3.81 2.55 1.75 1.51 2.26 3.33 4.17 2.91 1.35 0.38 2.99 2.84 15.45 10.49 6.94 10.13
23.31 51.94 20.21 29.2 26.16 34.42 52.96 19.44 15.66 18.77 41.59 34.01 16.57 12.73 15.09 20.4
38.68 37.77 22.72 27.19 22.41 33.32 27.32 13.23 24.36 28.45 32.15 29.82 16.32 12.16 10.34 23.46
1.12 2.17 1.85 1.04 1.95 2.51 2.59 1.06 1.18 1.33 2.67 1.17 8.45 6.04 6.94 5.93
10.28 10.05 3.51 3.92 6.29 6.97 7.61 5.5 9.21 4.17 11.71 3.77 3.33 4.33 4.61 4.64
33.41 31.51 11.28 17.2 11.64 27.02 28.79 7.85 9.92 8.34 22.67 20.71 22.01 19.55 22.34 22.83
0.0 0.32 0.11 0.07 0.0 0.21 0.0 0.0 0.0 0.08 0.26 0.08 0.0 0.0 0.0 0.19
1.42 6.91 1.61 1.7 2.31 0.33 3.44 0.44 0.0 0.0 1.69 3.53 2.36 2.62 0.96 1.17
1.78 34.68 10.49 11.76 12.85 15.98 15.47 6.98 14.94 12.76 18.01 15.84 0.43 2.39 3.34 2.73
0.09 0.95 0.03 0.24 0.03 0.31 0.27 0.52 0.4 0.33 0.6 0.32 0.1 0.38 0.4 1.02
0.25 2.29 0.88 0.45 0.67 1.09 3.04 0.03 0.05 0.0 0.11 1.44 0.0 0.25 1.07 0.0
0.59 0.28 0.42 0.2 0.52 0.76 0.23 0.04 0.16 0.0 0.08 0.0 0.0 0.37 0.39 0.0
59.16 175.31 18.99 24.34 37.39 114.8 74.35 34.5 71.09 35.32 84.51 79.76 98.8 110.21 61.43 74.67
1.62 29.47 11.74 16.79 12.08 55.39 46.6 4.02 3.32 3.79 21.89 15.68 4.09 3.31 2.4 3.56
56.99 59.19 41.77 49.3 54.82 49.88 56.49 42.53 64.31 54.09 68.9 50.98 22.97 18.95 21.68 20.53
1.32 1.3 0.0 0.0 0.98 1.67 1.21 0.93 0.0 0.21 0.64 0.79 1.44 2.48 0.95 2.21
0.67 0.52 0.76 0.51 1.18 1.77 1.01 0.53 0.54 0.0 0.0 0.12 1.21 0.5 0.89 0.42
2.56 18.61 7.83 9.23 7.36 15.75 25.99 2.67 0.0 0.06 10.73 13.28 0.41 0.19 0.0 0.99
0.03 1.11 0.18 0.03 0.2 1.46 0.98 0.32 0.14 0.04 0.25 0.2 0.09 0.24 0.85 0.0
3.67 114.28 91.69 44.67 36.79 216.78 248.66 84.36 43.72 56.65 84.69 143.79 0.64 0.09 0.0 0.08
8.9 7.59 5.72 5.35 6.98 7.47 10.41 6.19 4.93 2.93 11.25 6.5 16.14 11.58 13.17 15.44
0.33 8.37 1.08 0.83 1.31 9.15 0.58 0.75 2.36 6.07 6.21 6.57 10.14 17.24 20.38 6.93
9.67 13.91 3.33 4.6 10.46 6.24 17.76 1.69 0.34 0.36 9.98 9.61 1.71 1.2 1.69 2.36
36.05 31.53 15.23 21.07 24.36 23.85 27.33 19.28 23.12 24.23 29.35 13.4 16.51 12.38 12.46 19.89
0.97 70.11 19.67 20.84 24.9 31.47 23.88 27.91 2.18 1.14 20.01 33.76 2.34 0.9 0.21 1.95
0.4 6.0 0.88 1.52 2.05 3.3 1.94 1.22 0.37 0.04 3.31 2.67 137.44 130.5 46.65 75.92
3.99 6.29 1.16 2.34 3.95 5.85 6.79 2.93 2.35 1.52 2.23 2.12 13.85 15.74 10.63 10.05
21.86 49.29 17.27 16.2 17.19 40.49 35.06 15.86 10.8 11.55 25.22 23.9 43.24 47.67 44.6 41.65
34.91 40.29 25.7 30.25 41.74 38.98 46.7 22.09 23.94 22.54 43.6 40.47 19.73 15.35 16.25 17.75
20.68 25.54 18.0 19.16 18.16 14.31 33.83 11.19 12.82 9.91 18.29 25.07 20.8 16.98 15.37 23.96
9.24 23.33 7.65 8.04 14.26 21.02 17.03 12.15 5.85 9.3 21.21 11.21 11.85 7.65 7.41 8.99
0.7 3.35 2.94 2.46 1.68 11.97 8.64 1.65 0.44 0.56 2.69 1.4 0.64 0.87 0.0 1.0
47.49 52.6 32.29 28.99 47.13 46.54 61.96 32.2 26.08 11.39 50.82 51.6 116.32 104.97 78.23 90.04
6.87 5.57 3.4 3.87 6.1 4.98 6.03 2.83 4.03 3.56 7.21 5.66 9.27 8.54 4.81 9.47
7.58 9.86 4.13 7.12 7.54 10.92 10.54 3.2 7.64 6.13 6.45 10.05 11.48 6.85 3.2 11.47
18.44 21.51 12.12 13.03 18.74 22.89 23.67 10.62 9.98 2.0 18.27 18.83 77.95 83.6 52.58 53.66
0.2 3.28 0.5 0.97 1.49 1.53 0.21 1.15 0.04 0.04 2.06 1.84 0.0 0.04 0.19 0.18
8.21 9.65 3.45 2.51 3.81 9.6 8.07 6.3 1.08 0.7 2.38 2.55 25.34 25.31 30.76 25.6
0.5 37.17 6.42 11.84 15.72 34.13 36.11 4.53 5.21 12.74 5.53 9.53 0.34 0.42 4.16 0.44
3.01 4.15 1.33 2.04 1.1 4.05 4.1 2.09 0.87 0.18 2.07 2.06 5.61 6.53 1.45 6.31
1.97 6.91 5.14 3.4 3.62 3.84 4.66 5.31 1.56 1.31 3.01 3.47 2.77 3.93 2.72 4.84
8.15 116.33 30.83 39.65 41.99 23.91 45.21 37.71 2.9 2.05 31.13 79.01 12.46 7.27 4.9 16.33
0.0 0.25 0.05 0.0 0.0 0.31 0.17 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3.5 18.08 2.08 2.72 2.91 10.58 9.12 4.35 6.99 7.01 13.12 9.91 14.51 9.22 10.52 15.67
28.32 159.31 83.66 58.57 46.06 106.29 45.05 123.28 22.0 1.9 99.08 78.4 30.38 40.74 66.6 37.52
78.54 490.8 177.38 218.27 184.37 266.38 156.61 113.18 6.93 61.98 230.6 278.93 215.57 86.45 90.8 381.61
22.61 32.05 8.41 8.96 13.55 34.0 29.81 9.57 7.97 5.58 13.3 6.35 15.9 8.58 2.82 17.34
0.11 2.26 0.68 0.65 0.27 1.56 0.87 0.12 0.96 0.08 0.73 0.76 0.1 0.19 0.0 0.0
9.75 14.63 6.48 11.27 12.96 19.58 11.51 10.15 4.27 5.31 10.27 7.19 32.29 31.9 41.9 23.52
23.28 51.0 18.4 20.15 33.04 48.1 57.39 7.7 15.53 8.44 37.22 31.83 2.57 3.12 3.03 2.36
1.58 3.29 0.15 0.08 0.4 2.33 2.91 0.95 0.68 0.0 2.29 1.76 0.0 0.11 0.0 0.0
0.0 0.85 0.06 0.04 0.11 0.71 1.43 0.01 0.0 0.0 0.39 0.06 0.0 0.0 0.0 0.0
0.04 0.97 0.08 0.0 0.08 0.6 0.1 0.17 0.0 0.24 0.62 0.69 0.0 0.0 0.0 0.52
2.53 4.26 7.44 11.88 15.85 45.66 34.84 3.86 2.83 1.54 10.51 7.89 0.0 0.0 0.33 0.0
1.29 5.56 0.4 0.95 0.32 2.97 4.53 1.45 0.4 0.65 3.2 4.56 10.26 8.56 1.66 10.56
0.0 1.06 0.65 0.34 0.5 0.78 0.24 1.56 0.0 0.24 0.73 0.23 3.72 0.87 0.56 1.97
17.61 67.93 9.69 24.61 15.81 44.77 25.18 6.69 2.51 1.4 22.47 12.17 13.12 8.09 3.05 12.88
17.74 250.15 65.44 48.24 41.87 31.57 153.05 19.22 14.62 21.44 114.53 209.28 35.91 106.3 84.24 59.19
3.01 31.95 5.53 5.94 12.31 21.56 8.55 5.43 3.62 0.91 12.64 22.43 14.53 36.72 67.88 6.72
6.11 4.04 2.6 1.91 4.77 7.08 6.47 3.0 3.26 1.05 4.71 4.93 5.13 7.31 8.71 9.74
4.03 28.56 8.54 6.21 6.48 32.85 45.77 15.52 5.87 15.83 18.51 19.73 1.91 0.17 0.0 0.98
12.37 6.59 0.92 1.52 6.06 23.24 12.07 4.58 2.4 2.85 14.89 15.08 21.82 17.31 7.87 14.19
1.82 142.9 56.57 48.8 68.79 67.29 48.5 85.92 3.1 3.0 5.69 56.16 0.14 0.26 0.54 0.5
0.0 2.71 1.49 0.4 0.46 1.08 0.0 0.2 0.0 0.36 0.84 0.49 0.0 0.0 0.81 0.0
2.57 1.98 0.51 0.0 2.8 4.92 2.86 1.72 0.0 0.0 0.0 0.0 3.08 1.89 1.89 2.3
19.66 28.67 19.14 23.43 28.03 30.51 26.96 17.59 20.97 19.32 26.76 13.75 12.04 6.61 4.3 11.39
19.36 25.32 11.5 17.25 18.85 12.88 20.73 16.51 26.84 20.31 21.9 15.93 24.15 15.93 14.4 25.4
89.51 85.16 42.74 65.34 61.27 63.93 70.73 29.14 58.93 90.31 71.08 80.97 36.69 27.48 21.05 50.3
4.07 28.31 15.15 12.56 7.91 12.53 7.99 2.09 0.03 0.0 11.79 12.31 10.66 6.03 6.5 12.89
5.01 14.79 6.06 6.75 8.11 11.18 11.36 6.43 4.27 4.65 1.78 3.7 30.01 51.38 21.75 21.7
44.03 36.13 31.26 33.53 30.84 39.11 40.47 24.23 25.49 27.12 42.01 36.08 33.53 27.92 27.77 32.02
3.36 2.52 2.23 2.25 2.52 3.15 2.96 1.72 2.02 1.75 4.28 3.31 4.43 4.32 2.57 5.6
2.16 0.92 0.71 0.8 1.19 1.1 1.15 0.57 0.87 0.87 2.16 1.45 3.11 3.62 3.14 4.81
651.41 1085.62 469.31 797.94 703.59 834.02 1164.24 296.28 519.37 406.16 986.64 1080.23 988.62 924.35 833.11 1367.13
24.62 33.21 18.0 25.21 20.81 25.02 25.01 16.96 19.57 19.09 30.33 23.74 26.47 20.39 19.79 23.92
3.02 20.12 9.42 14.15 11.29 13.96 19.6 13.15 4.35 3.67 14.94 16.39 2.52 2.77 1.17 2.31
22.86 30.66 16.64 11.58 21.39 16.59 30.22 11.11 8.19 12.87 13.58 24.16 15.41 13.22 16.58 19.02
23.7 33.96 13.6 9.43 18.72 27.29 32.63 19.09 12.82 9.23 18.66 15.59 40.19 45.1 37.75 43.1
113.9 102.4 65.54 43.22 69.3 117.58 85.96 52.65 74.37 55.95 49.47 62.17 134.63 139.07 226.83 142.84

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)