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Heatmap: Cluster_315 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.15 -1.61 -2.11 -1.46 -1.53 -2.0 -0.34 0.12 0.43 -0.29 0.2 -0.79 1.27 0.8 0.22 1.18
0.39 -1.08 -0.99 -0.72 -0.63 -0.49 -0.22 0.52 1.1 1.22 0.21 -0.67 -0.25 -0.38 -0.8 0.01
0.97 -0.9 -1.57 -1.46 -0.7 -0.95 -0.16 0.88 0.62 0.74 -0.18 -0.73 0.06 -0.17 -0.46 0.68
0.22 -0.67 -2.46 -2.42 -1.33 -1.71 -0.46 0.12 -0.04 -0.01 0.27 -0.75 1.25 0.66 0.42 1.18
-0.12 -0.17 -0.36 -0.2 -0.51 -0.67 -0.74 1.56 1.25 1.2 -0.65 -0.29 -1.2 -1.45 -1.99 -1.07
-0.73 - -0.91 - -0.78 -0.94 - 1.32 0.67 1.32 -0.2 - - 2.05 - 1.12
0.82 -0.21 -2.06 -2.43 -1.39 -0.68 -0.07 0.05 0.54 0.7 0.02 -0.6 0.71 -0.12 -0.7 1.01
1.01 -0.16 -1.8 -1.58 -1.61 -1.11 0.55 -0.13 1.04 0.9 0.17 0.33 -0.23 -0.34 -0.92 -0.29
0.36 0.03 -0.89 -1.39 -0.57 -0.79 0.13 -0.53 0.35 0.52 0.18 0.11 0.7 0.04 -1.22 0.79
0.71 -0.3 -1.42 -1.4 -1.02 -0.55 0.27 0.43 0.52 -0.07 -0.13 -1.58 0.57 0.18 0.06 0.82
0.91 -0.2 -3.87 -3.44 -4.12 -3.15 -2.85 1.24 -0.47 -0.19 -0.2 0.2 0.9 0.58 0.07 1.26
0.07 -0.64 -1.51 -1.1 -0.6 -0.21 -0.46 -0.05 0.2 0.29 -0.16 -0.39 0.84 0.26 0.36 0.98
0.14 -1.76 -1.49 -1.84 -0.88 -0.39 -0.42 0.62 0.28 0.57 -0.05 -0.36 0.85 0.57 -0.04 0.74
2.24 - - -3.88 - - -3.89 0.26 0.74 1.44 -3.55 -3.65 1.28 -3.4 -2.33 1.43
-1.98 -4.29 -6.24 -4.91 -5.34 -3.84 -3.08 2.17 1.59 1.69 -0.82 -1.01 0.0 -0.03 -0.46 -0.09
2.21 -0.56 -1.47 -1.95 -1.69 -1.81 -3.46 1.25 0.72 1.55 -2.79 -1.68 -0.47 -0.26 -2.52 -2.03
0.28 -0.12 -0.68 -0.5 -0.72 -0.3 0.42 -0.47 0.89 0.98 0.03 -0.58 -0.16 -0.32 -0.33 0.07
1.21 -0.86 -0.58 -1.06 -0.42 -0.6 -1.15 0.14 -0.36 0.59 -1.56 -1.63 0.57 0.41 0.33 1.0
0.63 -1.09 -2.22 -2.68 -1.99 -1.6 0.09 0.15 0.86 0.8 0.42 -0.46 0.72 0.11 -0.08 0.64
1.01 -1.37 -1.18 -0.66 -0.69 0.48 -0.46 0.0 0.15 0.96 -1.1 0.46 -0.1 -0.09 -0.09 0.1
0.95 -0.85 -0.77 -0.74 -0.88 -0.66 -0.07 0.17 0.49 0.68 0.42 -0.1 0.23 0.04 -0.39 -0.29
0.28 -1.24 -4.78 -6.45 -2.33 -1.91 -0.53 -0.68 0.17 0.24 -0.16 -0.11 1.65 1.05 0.01 1.14
1.14 -1.68 -2.57 -2.03 -1.96 -1.33 0.4 0.27 0.87 0.64 -0.16 -1.73 0.6 0.38 -0.28 0.73
0.78 -0.57 -1.16 -1.76 -1.04 -0.45 -0.77 -0.32 0.07 0.59 -1.18 -0.62 1.11 0.87 -0.55 0.96
0.43 -1.28 -1.25 -1.19 -0.72 -1.12 0.1 0.32 0.64 0.36 0.11 -0.47 0.55 0.23 -0.19 0.88
0.18 -1.15 -2.45 -2.12 -1.51 -0.49 0.45 0.75 1.19 0.64 0.05 -0.84 0.56 -0.27 -0.51 0.54
0.8 -0.37 -0.71 -1.07 -0.33 -0.57 0.39 0.57 0.93 0.76 0.1 -0.41 -1.01 -0.89 -0.8 0.14
0.68 0.06 -1.62 -1.41 -1.34 -0.69 -0.33 0.45 0.39 0.34 -1.01 -1.82 0.79 0.52 0.14 0.89
0.81 -0.57 -1.05 -1.18 -0.71 -0.68 0.18 0.81 0.99 0.97 0.1 -0.85 -0.07 -0.59 -1.01 -0.24
0.44 -1.29 -1.92 -2.35 -1.46 -1.11 0.13 0.71 0.63 -0.24 0.36 -0.63 1.17 0.33 -0.55 0.78
1.05 0.1 -1.17 -1.03 -0.57 -0.44 0.53 0.3 0.65 0.66 0.17 -0.41 -0.27 -0.82 -1.11 -0.07
0.19 -0.08 -0.48 -0.03 -0.62 -0.76 -0.16 1.17 1.21 0.9 -0.48 -0.05 -0.94 -0.94 -1.45 -0.82
0.71 -0.08 -1.98 -1.76 -0.49 -0.45 -0.02 0.97 0.84 0.78 -0.5 -0.81 0.36 -0.11 -1.03 -0.04
1.38 0.21 -2.18 -1.86 -0.6 -1.79 -0.13 0.41 1.05 0.87 0.4 -0.65 -1.7 -0.81 -0.6 0.21
0.64 -0.63 -1.36 -1.4 -1.05 -0.66 -0.21 0.14 0.63 0.5 0.32 -0.52 0.54 -0.04 -0.28 0.85
0.74 0.29 -0.59 -0.53 -0.47 -0.04 0.27 0.03 0.67 0.66 0.34 -0.21 -0.41 -0.72 -1.35 -0.37
0.29 -0.39 -3.06 -2.42 -2.47 -1.88 -0.02 -0.41 0.68 0.81 0.23 0.19 1.06 0.29 -0.31 0.78
0.81 -1.19 -2.21 -2.03 -1.29 -1.48 -0.29 1.07 0.48 0.32 -0.1 -0.3 0.59 0.49 -0.79 0.85
0.34 -0.8 -2.42 -2.42 -0.9 -0.73 -0.41 0.06 0.31 0.36 -0.3 -0.33 0.83 0.69 0.44 0.98
0.14 -0.18 -0.57 -0.11 -0.48 -0.68 0.54 -0.29 0.59 0.77 0.07 -0.21 -0.14 -0.16 -0.83 0.4
-0.22 -1.56 -3.2 -4.04 -1.71 -2.08 -0.48 0.06 0.72 -0.09 -0.12 -1.9 1.57 0.74 -0.02 1.55
0.63 -2.08 -1.89 -2.42 -1.76 -1.13 -0.3 0.43 0.59 0.94 0.78 -0.35 0.85 -0.04 -0.63 0.58
0.23 -0.81 -1.37 -1.97 -0.96 -0.66 0.34 -0.01 0.79 0.69 -0.03 -1.11 0.59 0.58 0.15 0.4
-0.3 -0.57 -0.83 -2.31 -1.0 -1.01 -1.84 -0.14 -0.82 -0.31 -0.67 -0.73 1.73 0.69 0.41 1.43
0.32 -0.12 -1.21 -1.02 -0.21 -0.09 -0.01 0.19 0.04 0.03 0.77 -0.15 0.53 0.05 -0.67 0.26
-6.38 - - - - - - -7.1 -6.55 -6.49 - - 2.2 2.47 1.21 1.8
0.09 -0.52 -1.34 -2.18 -0.65 -0.27 -0.59 0.18 0.03 -0.07 0.24 -0.69 0.88 0.52 0.42 0.98
1.28 -0.37 -2.12 -1.48 -2.14 -1.56 0.62 0.75 1.11 0.8 0.67 -0.2 -0.79 -0.96 -1.63 -0.58
1.45 -1.45 -2.41 -3.21 -2.11 -1.76 -1.16 0.84 0.49 0.93 -2.01 -1.81 0.65 0.27 0.69 0.67
0.38 -0.92 -1.23 -1.17 -0.9 -0.8 0.31 0.5 0.86 1.06 0.14 -0.6 0.16 0.12 -0.57 0.02
0.84 -0.53 -1.49 -1.01 -1.44 -0.63 0.29 0.12 0.83 0.42 0.58 0.03 0.29 -0.45 -0.95 0.33
0.32 -0.8 -1.02 -0.83 -0.73 -0.57 0.39 0.11 1.05 1.18 0.18 -0.81 -0.25 -0.32 -0.67 0.19
0.7 -0.23 -2.16 -3.02 -2.2 -1.68 0.38 -0.32 0.45 0.69 0.13 0.07 0.88 0.29 -0.54 0.74
0.83 -0.82 -3.83 -3.84 -1.15 -0.92 0.58 1.07 1.0 0.27 -0.08 -1.65 0.57 0.05 -0.62 0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.