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Heatmap: Cluster_268 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.31 -0.34 -0.77 -1.39 -0.37 0.58 -2.55 -3.61 -1.19 - -2.08 - 0.69 -0.4 2.41 1.57
0.03 1.25 0.61 - 1.54 2.59 - -2.08 - - - -0.79 - - - 0.39
-3.06 -2.85 0.24 0.6 1.35 2.61 0.05 -3.21 -1.45 - -0.35 -1.46 - - 0.79 -
- -0.72 - - 1.03 3.46 0.23 0.23 - - - - - - - -
- - - 1.69 - 3.64 - -1.75 - - - - - - - -
- - - - 1.41 2.81 0.42 -0.51 -2.14 - 0.28 -2.15 - -0.9 - 1.07
-1.72 -2.84 0.18 -1.44 1.17 2.04 0.47 0.23 0.34 -0.82 -1.27 -2.63 -0.64 -0.5 - 0.45
0.67 -1.16 -1.4 -0.78 1.45 2.11 0.52 -1.04 -2.0 -1.93 1.19 -1.01 - - -0.43 -
-0.46 - - - - 2.25 - - - - - 1.27 - 1.45 - 2.42
0.75 -3.43 0.38 0.7 0.95 2.07 -1.64 -2.72 -2.97 -1.82 0.83 0.62 -2.11 -2.21 -1.81 -2.1
- -0.3 -3.94 - -0.22 2.2 -2.61 -4.27 -1.79 - - - 2.19 1.28 -1.02 0.73
- - - - - 3.78 1.2 - - - - - - - - -
- - - 1.3 1.07 3.52 - - - - - - - - - -
- - - -0.63 - 1.01 - - - - - - - 0.84 3.53 -
- - 0.84 - 0.97 3.61 - - - - - - - - - -
- - 0.3 0.72 1.39 2.19 - - - - - - - - 2.57 -
-0.05 -2.67 0.28 0.16 0.59 1.67 -1.97 -0.79 -0.75 -1.64 0.35 -0.01 0.05 0.34 -0.78 -0.07
- - 0.31 -0.76 0.01 1.19 -0.56 -5.38 - - - - 1.21 0.12 2.51 0.09
- - 0.86 0.61 -1.6 2.79 - -2.39 -1.14 -0.08 -0.05 0.85 - - - 0.06
-5.65 -2.03 -2.07 -2.85 0.02 1.44 0.03 -0.49 -0.59 -1.2 -0.2 -1.44 1.36 1.05 -0.08 0.98
-5.49 -0.45 -4.07 -5.99 1.37 3.65 - - - - - - - - - -
- - - - - 3.12 - - - - - - - - - 2.87
- - 0.87 0.95 1.74 3.06 - - - - - - - -0.89 - -
-0.78 -2.55 -1.89 -0.55 - 2.17 - - - 0.36 -1.19 0.7 - -1.08 2.57 -
- - -0.27 0.85 1.76 2.99 -3.4 - - - -2.05 0.75 - - - -
-1.21 -1.51 -1.53 -1.99 0.34 2.05 -0.26 0.04 -1.49 -1.06 -0.74 0.51 0.18 0.41 -0.0 0.04
- - - 0.95 1.67 2.59 - - 1.2 - - - - 1.37 - -
- - - -0.84 -1.04 3.78 - 0.24 - - - - - - - -
-1.56 - 0.18 0.54 0.27 2.89 1.23 -3.57 - - - 0.12 - -1.03 - -1.06
-1.29 -1.2 -1.17 0.08 0.83 1.65 -1.58 -1.63 -2.51 -3.58 -0.24 -0.17 1.05 1.41 -0.35 -0.78
-1.89 1.48 0.54 0.09 1.23 2.81 -6.22 -4.66 -2.51 -3.74 -1.18 -2.17 -5.06 -6.15 -5.67 -6.76
0.23 -0.52 0.02 0.61 1.15 1.88 -0.73 -1.56 -0.79 -0.48 0.5 0.07 -1.67 -2.03 -2.88 -1.81
- - - - - 4.0 - - - - - - - - - -
- - 1.48 - 1.61 3.35 - - - - - - - - - -
0.22 -0.37 0.09 0.64 0.44 1.56 -0.15 -0.81 -0.92 -0.97 0.23 -0.07 -0.73 -0.75 -0.69 -0.55
- - - - - 0.17 - - - - - - 0.53 1.02 3.51 -
- - - - - 4.0 - - - - - - - - - -
- 0.41 - - - 2.42 - 2.94 - - - 0.72 - - - -
- - - - 1.79 3.65 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- 0.32 0.91 -0.75 - 3.34 - - - - - 1.09 - - - -
-1.25 - - - 1.28 3.27 -2.18 -5.58 - - - - 0.79 -3.12 -0.05 -1.15
-0.01 -1.09 -0.6 -0.07 0.22 1.14 0.02 -0.26 0.12 -0.41 0.16 -0.12 0.04 0.12 -0.64 0.09
0.03 -1.18 -0.17 0.51 0.78 1.55 0.19 -0.37 -0.02 0.14 0.63 0.25 -2.77 -2.88 -1.44 -2.35
- - -2.43 -1.08 -0.74 3.71 - - - - -1.7 - - - 0.44 -
- - -2.26 - 0.18 3.49 - - - - - - - -1.45 1.62 -
0.05 0.29 -0.42 -1.08 1.51 2.73 - - -0.83 0.23 - - - 0.39 - -
-4.39 - -3.56 - - -1.59 -4.23 - - - - - 2.44 1.26 -0.67 2.81
0.57 1.75 0.15 0.28 1.56 2.33 - - -4.23 -2.19 - -1.91 - -3.9 - -1.98

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.