Heatmap: Cluster_256 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-5.5 - 2.57 2.19 0.98 1.72 -4.91 -7.73 - - -3.81 -3.69 - - -5.1 -
-5.26 - 2.42 2.31 0.74 1.63 -1.41 -5.29 -3.27 -4.79 -3.76 -2.54 - -4.62 - -3.65
- - 2.03 2.04 1.57 1.87 - - - - - -2.3 - -0.06 - -
-2.67 0.75 1.5 1.95 0.82 1.15 0.3 -0.97 -1.28 -1.95 -2.35 -1.27 -3.4 -2.75 -3.42 -3.08
- - 2.61 2.2 -0.13 0.64 0.25 -3.86 - - -4.25 -4.35 - - 0.56 -
-3.76 -1.59 2.03 2.2 1.32 1.54 -2.24 -5.93 -3.7 -4.64 -0.51 -1.12 - - - -
-3.21 -2.37 1.91 1.79 1.44 1.54 -1.24 -3.06 -2.58 -1.42 -2.49 -3.59 -2.24 -3.47 -0.27 -1.44
- - 2.58 2.42 0.27 1.29 -1.45 -5.44 -3.98 - -1.85 -1.87 - -6.76 - -
-8.54 -2.27 2.09 2.38 0.43 1.56 -3.79 -4.13 -4.87 -4.55 -2.06 -1.59 -1.15 -2.62 -3.87 -0.8
-3.22 -1.34 1.83 1.52 1.09 1.57 -1.08 -1.8 -0.41 0.12 -1.74 -1.61 -2.31 -2.05 -4.25 -2.1
-2.31 -1.24 1.59 2.25 1.48 1.55 -4.29 -6.68 -4.05 -3.99 -3.37 -3.48 -1.7 -1.63 -0.14 -
0.42 -0.38 1.62 1.61 0.85 0.71 -0.72 -1.95 -1.52 -1.69 -0.38 -0.13 -2.03 -1.84 -1.98 -1.55
-9.44 -4.27 2.45 2.39 1.12 1.35 -2.97 -7.39 -4.64 -6.2 -3.12 -2.89 -5.74 -6.28 - -4.02
- -3.76 2.51 1.88 0.82 2.01 -4.71 -5.36 -5.47 -2.41 -3.37 -1.89 - - - -3.24
-5.75 - 1.92 1.68 1.59 2.0 -2.8 -2.39 -0.77 -1.13 -1.94 -1.56 - - - -
-6.69 -8.21 2.04 2.3 1.16 1.8 -1.15 -2.74 -4.02 -5.25 -2.33 -1.52 -7.19 -6.7 -6.22 -
-2.29 0.65 1.76 1.93 1.63 0.89 -1.54 -2.22 -3.2 -3.63 -1.06 -0.52 -5.22 -6.73 -6.24 -3.54
-1.81 -0.55 1.81 1.32 0.7 1.17 -0.95 -1.54 -1.88 0.08 -1.27 -0.79 -0.93 -0.87 -1.16 -1.07
-3.48 -1.06 2.28 2.06 0.7 1.27 -1.78 -2.83 -2.51 -1.52 -0.29 -0.86 -8.73 -7.62 -5.82 -7.59
-7.06 -4.97 1.93 1.63 0.98 1.06 0.27 -2.43 0.11 0.23 -0.54 -0.59 - - -6.83 -
- -0.01 1.15 2.16 1.73 1.93 -3.02 - - - - -3.34 - - -0.05 -
-5.06 -6.14 2.03 2.02 1.55 1.82 -4.27 -5.18 -3.22 -2.7 -1.57 -1.65 -4.89 -5.24 -2.41 -3.27
-5.36 - 2.41 2.3 -0.6 1.76 -5.6 -6.58 -4.84 -3.64 -0.18 -0.68 - - -4.84 -
-7.55 -3.08 2.44 2.4 1.13 0.74 -1.67 -3.58 -4.84 -3.95 -1.42 -1.32 - -5.96 -4.63 -6.31
-2.62 -3.49 2.38 2.34 0.8 0.92 0.29 -4.38 -8.86 -5.99 -1.99 -2.03 - -4.22 -4.96 -
-4.08 -0.87 1.94 2.0 1.1 1.2 -0.39 -1.58 -5.85 -2.34 -0.24 -0.62 - -2.3 -3.55 -
-1.7 0.08 1.72 2.12 1.63 1.45 -4.81 -6.63 -3.52 -3.68 -1.19 -1.05 - - - -
-2.85 -3.97 2.35 2.02 1.03 1.78 -3.1 -9.25 - -8.95 -2.57 -1.03 -3.59 -6.45 -2.45 -3.55
- -2.87 2.02 2.33 1.49 1.81 -2.6 - - - -2.27 -3.38 - - - -
-4.34 0.4 1.8 1.92 1.0 1.41 -0.32 -0.42 -4.07 -2.86 -1.84 -1.36 -4.8 -2.84 -3.82 -4.11
-7.58 - 2.12 2.24 0.22 1.84 -4.62 -1.52 -1.7 -2.02 -0.75 -0.62 - - - -
-0.71 -1.14 0.98 0.84 -0.25 0.18 -2.38 -1.44 -2.21 -3.04 -2.35 -1.67 1.17 1.06 -0.41 1.43
-8.56 -11.02 2.5 2.45 1.32 0.51 -1.93 -5.27 -11.85 -10.2 -4.16 -0.83 -5.35 -5.71 -7.96 -6.06
-0.2 0.18 1.95 1.82 0.56 0.98 -2.45 -4.2 -4.99 - -3.9 -2.89 -1.1 0.21 -2.71 -0.14
-4.19 -4.26 1.52 2.08 0.97 2.14 -3.6 -2.53 -3.59 -3.53 -0.08 -0.72 -3.82 - -2.85 -1.95
-3.11 -2.16 1.19 1.36 1.0 1.19 -2.38 -3.91 -5.03 -4.99 -4.92 - 1.19 0.7 -0.59 0.68
-3.53 -6.31 2.36 2.33 0.12 1.63 -0.36 - - - -2.71 -0.68 - - - -
-7.02 -2.08 2.08 2.45 0.16 1.71 -2.43 -6.07 -5.64 -5.58 -3.23 -3.33 - - -1.47 -0.2
- - 2.5 2.25 0.69 1.07 0.38 -7.28 - - -3.6 -1.04 - - - -
-6.75 - 2.71 2.52 0.52 1.16 -7.05 -7.57 - -7.34 -6.31 -6.6 - -7.56 - -
-4.16 -2.0 1.37 2.02 1.49 1.69 -0.64 -4.65 -3.94 -3.29 0.03 0.18 - -6.27 - -
-0.97 -0.45 1.12 1.25 0.28 0.4 -1.58 -2.12 -2.49 -3.11 -2.46 -2.04 -0.05 0.92 0.87 0.76
-5.86 -7.78 1.99 2.24 1.03 1.56 -5.44 -2.58 -2.25 -1.29 -0.29 -0.81 -3.99 -6.41 -6.34 -5.85
- - 2.46 2.15 0.29 1.68 -5.3 0.3 -7.81 -8.34 -2.24 -2.89 - - - -8.2
- - 2.73 2.32 0.69 1.04 -3.92 - - - -3.57 -0.86 - - - -
-4.52 -3.99 1.07 0.66 -0.49 0.24 -2.27 -0.11 -5.92 - -4.56 -3.25 1.54 0.89 1.26 0.9
-7.56 -7.9 2.14 2.0 1.9 1.76 -6.11 -6.03 -6.74 -4.87 -2.0 -3.22 - - - -
- 0.24 1.09 1.95 1.21 1.58 - -1.8 - - - -1.13 - -0.9 1.17 -
-0.04 -3.29 1.73 2.05 1.1 1.46 -3.3 -3.2 -2.96 -5.7 -2.5 -1.87 -1.1 -0.93 -3.44 -0.54
-4.85 -0.51 2.27 2.19 1.08 1.49 -5.68 -7.18 -6.23 -4.31 -1.73 -1.95 -4.56 -4.41 -3.0 -3.29
-4.01 -8.87 2.1 2.53 1.29 1.34 -3.03 -5.98 -5.16 -5.88 -1.77 -2.2 -4.82 -4.33 -3.26 -5.53
-2.57 -3.14 2.25 2.07 1.0 0.84 -2.43 -2.04 -4.15 -3.28 -1.24 -1.07 -1.62 -3.31 -1.5 -0.53
- - 1.97 1.99 1.04 1.4 0.1 -1.47 -2.55 -1.93 -0.3 -0.46 - - - -
-2.2 -2.48 2.37 2.16 1.06 1.06 -5.56 -4.39 -4.25 -4.78 -1.49 -0.99 -2.98 -2.49 -2.59 -1.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.