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Heatmap: Cluster_188 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
24.18 141.06 257.88 165.26 222.89 130.59 7.97 88.26 26.48 48.36 45.74 52.06 41.73 38.83 62.2 43.57
69.25 393.31 893.12 794.44 596.4 614.16 67.03 196.76 191.97 231.23 288.76 235.7 12.74 11.09 86.17 21.41
18.26 14.25 25.99 20.95 49.41 14.91 2.43 9.62 6.98 3.38 1.81 1.69 3.77 3.98 0.63 6.7
0.01 0.37 0.07 0.06 0.1 0.07 0.03 0.02 0.0 0.0 0.0 0.0 0.17 0.04 0.0 0.0
0.45 1.76 1.88 1.54 0.87 1.24 0.0 0.25 0.07 0.0 0.0 0.14 0.18 0.33 1.39 1.3
0.0 6.31 1.64 2.9 3.7 1.23 0.0 0.03 0.32 0.0 0.34 0.0 0.75 1.06 0.0 0.0
170.21 781.13 394.45 489.52 344.33 239.09 132.26 85.38 75.53 59.27 261.53 201.01 57.94 56.34 57.29 66.48
2.3 54.01 67.51 28.15 48.93 36.05 21.98 15.04 0.58 0.81 3.51 5.37 0.49 0.41 2.51 0.9
9.91 48.97 16.05 23.46 20.04 9.93 2.17 1.05 3.24 3.78 9.08 23.29 7.24 0.45 1.07 11.92
7.37 17.28 18.44 18.61 18.09 19.09 4.06 2.76 1.55 0.81 2.67 2.45 15.0 17.76 5.16 15.4
78.36 122.81 61.09 83.7 53.87 49.24 43.11 19.43 45.01 33.08 36.39 32.09 34.68 26.99 12.38 49.26
3.44 5.58 2.3 3.46 2.92 1.26 0.18 0.27 0.12 0.0 0.04 0.16 1.69 1.45 1.18 1.46
0.1 8.27 6.79 2.46 4.75 9.6 0.0 0.12 0.0 0.0 0.7 0.0 0.78 0.37 0.0 1.44
1.99 44.31 42.98 36.48 25.97 47.02 0.88 7.63 11.75 11.98 4.74 5.37 0.0 0.11 0.0 0.0
16.69 18.46 12.28 17.78 11.13 10.47 7.91 5.97 9.07 9.14 10.4 12.73 3.66 5.07 7.49 6.86
52.58 152.25 230.15 186.52 132.69 169.62 0.72 1.49 0.86 0.37 12.58 22.43 0.0 0.09 0.2 0.09
51.97 702.79 473.2 163.34 828.76 215.53 8.4 39.85 4.55 10.93 28.46 79.33 1187.45 137.88 6780.66 278.46
1.98 26.41 39.92 44.17 18.1 29.2 2.8 16.57 38.82 12.25 1.9 1.93 0.51 5.06 0.61 0.57
27.57 63.33 100.67 111.41 72.82 172.32 20.89 15.75 9.85 16.53 52.6 50.04 6.09 7.18 5.74 6.15
1.69 7.71 14.02 8.75 16.19 14.06 4.27 10.42 0.39 1.29 3.02 11.59 11.34 8.9 9.69 9.32
0.07 0.04 3.96 2.49 2.77 1.71 0.54 1.54 0.43 2.17 0.25 0.38 0.72 0.06 0.0 0.66
1.33 15.88 25.56 21.87 24.36 16.56 6.84 2.09 1.71 1.13 6.47 7.74 1.41 1.41 2.3 1.11
2.66 60.56 38.05 44.47 64.26 29.22 20.59 3.01 1.71 0.94 3.64 4.23 0.13 0.36 0.25 0.23
1.18 18.7 51.56 41.11 53.95 35.55 4.76 2.98 11.98 4.33 24.5 19.18 6.6 3.39 5.86 4.2
5.68 66.0 115.93 62.56 94.34 48.21 12.3 2.16 7.12 7.82 6.18 10.4 29.73 34.45 18.48 22.15
93.72 154.08 441.68 303.56 193.81 238.55 23.87 23.49 2.81 7.95 99.91 92.9 3.07 2.73 11.78 5.93
30.52 237.01 219.99 145.82 175.79 202.25 22.6 25.39 84.16 48.11 63.79 56.58 66.73 94.98 57.53 68.78
1.98 53.11 45.14 54.14 46.82 11.01 21.49 0.47 0.72 0.0 0.78 0.72 0.0 0.0 0.0 0.0
0.03 6.04 7.04 4.81 5.17 4.64 0.41 0.0 0.0 0.0 0.0 0.0 0.21 0.39 0.41 0.38
1.56 127.47 280.33 235.1 196.16 200.31 13.85 7.73 3.85 2.85 29.16 33.78 1.86 0.69 0.36 2.04
1.08 1.37 1.76 1.33 3.52 2.76 0.79 0.56 0.3 0.31 1.05 0.52 61.29 120.55 84.78 37.33
0.56 56.81 24.64 28.74 57.12 33.57 4.54 0.04 0.1 0.1 0.81 1.32 0.0 0.22 0.0 0.0
0.0 1.24 0.72 0.84 0.89 0.47 0.27 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0
0.03 38.52 23.99 24.6 87.61 25.89 0.99 0.04 0.0 0.0 1.48 3.4 0.0 0.0 0.0 0.19
35.33 287.06 545.4 444.64 381.06 332.82 107.16 65.18 9.13 5.2 60.03 126.47 16.98 6.33 1.47 29.38
0.11 0.33 0.55 0.05 0.85 0.14 0.0 0.01 0.0 0.0 0.0 0.0 0.14 0.85 0.82 0.0
0.35 2.83 1.55 1.66 1.65 0.44 0.5 0.11 0.21 0.15 0.53 0.28 0.0 0.0 0.0 0.0
0.64 7.8 9.38 5.14 7.18 6.19 6.22 3.94 0.7 0.44 1.5 3.2 1.03 3.54 3.38 5.68
18.05 150.44 205.94 207.03 149.18 183.66 93.43 49.04 38.8 65.13 63.94 88.48 32.64 39.81 16.42 30.85
28.95 88.74 52.96 61.03 40.52 33.93 34.82 37.68 12.64 3.78 22.7 17.56 1.61 0.99 0.73 7.06
55.84 68.87 97.27 141.02 119.42 109.7 55.71 47.47 47.93 34.25 58.92 66.91 49.56 54.3 49.52 51.56
1.08 2.79 3.09 3.1 1.96 6.33 0.34 1.12 0.46 0.35 1.17 1.25 0.85 0.4 1.47 0.39
208.6 2386.17 2457.05 2843.6 2212.56 1653.49 722.4 414.14 270.77 140.55 877.91 794.23 180.43 120.9 118.88 184.16
0.41 4.92 2.82 3.25 2.48 3.37 0.76 0.58 1.53 1.06 1.16 0.51 0.19 0.09 0.72 1.34
0.71 52.07 33.18 46.89 66.84 22.43 2.78 3.93 4.51 3.13 4.88 9.31 0.15 0.14 0.0 0.0
8.1 15.96 30.37 29.52 27.08 23.57 9.99 4.16 8.15 7.71 7.96 12.83 16.1 16.03 14.59 19.42
14.34 26.18 24.51 23.74 24.74 20.35 7.77 6.99 1.94 0.6 5.6 5.71 26.34 28.7 16.67 17.39
0.07 20.23 24.62 16.88 22.05 19.3 2.53 0.2 0.39 0.1 1.89 6.44 0.49 0.11 0.96 0.67
0.38 1.37 0.99 0.78 1.28 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.45 0.0
0.98 9.6 5.21 6.75 4.76 3.3 0.95 0.5 3.53 3.57 1.07 0.86 0.0 0.0 0.0 0.0
2.53 17.13 30.65 30.89 18.73 52.7 8.54 7.26 0.85 0.88 4.14 4.62 3.36 2.48 0.0 5.52
0.54 13.42 8.12 4.18 4.31 13.45 3.64 0.12 0.13 0.0 1.25 1.45 0.49 0.57 6.32 0.59
11.51 21.47 18.43 18.8 18.81 18.45 11.46 11.92 10.66 10.95 9.1 11.51 17.51 16.07 11.25 15.22
0.0 0.95 1.49 1.67 2.05 0.29 0.0 0.1 0.06 0.0 0.0 0.19 0.0 0.0 0.0 0.0
0.0 3.18 2.71 2.99 1.53 0.78 0.0 0.0 0.18 0.0 0.19 0.36 0.0 0.2 0.0 0.0
8.81 86.25 234.12 208.15 176.95 171.73 22.74 51.36 31.41 18.55 24.12 26.62 0.31 0.12 0.82 0.77
63.78 130.7 107.08 135.83 113.63 196.24 37.57 63.61 59.02 81.13 60.44 40.74 25.3 21.46 16.03 28.92
27.83 106.09 83.31 101.12 239.19 73.84 21.31 51.26 29.53 21.14 38.58 48.13 10.84 4.4 28.34 14.88
6.63 60.59 70.31 32.37 128.0 58.37 29.95 4.55 0.0 0.09 14.89 20.21 1.06 0.59 1.66 3.29
0.0 16.06 9.23 4.1 1.6 7.11 0.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.02 1.54 1.19 0.44 1.01 0.77 0.19 0.03 0.07 0.0 0.07 0.0 0.0 0.08 0.0 0.0
0.0 4.09 1.26 0.15 2.42 1.3 0.35 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0
1.22 5.88 5.07 5.95 3.06 3.2 0.74 0.98 4.18 1.57 1.33 1.3 1.15 0.23 2.26 1.06
1.6 14.68 15.01 11.65 10.82 11.01 0.3 0.3 0.06 0.2 0.42 1.29 4.24 2.52 0.64 5.09
12.19 107.64 155.09 126.72 113.38 142.79 79.44 31.1 20.66 11.14 74.92 49.14 3.43 1.68 2.24 3.74
2.18 3.54 2.97 1.84 1.87 4.96 2.13 2.56 1.5 1.04 2.17 1.52 2.21 3.29 2.67 1.71
0.32 2.47 1.54 1.72 2.35 0.96 0.72 0.2 0.07 0.0 0.19 0.0 1.09 0.85 0.71 1.16
0.18 0.91 0.74 0.24 0.98 0.74 0.23 0.22 0.0 0.0 0.0 0.0 1.36 1.91 0.0 1.87
0.04 0.92 0.31 0.28 0.32 0.37 0.0 0.0 0.0 0.0 0.0 0.0 0.32 0.09 0.0 0.24
0.54 1.8 1.34 0.85 0.91 1.49 0.32 0.26 0.13 0.0 0.14 0.13 0.94 3.23 2.47 0.86
96.33 242.18 299.34 203.77 424.72 127.12 21.48 78.09 53.77 39.97 12.04 22.79 103.45 68.06 62.07 67.45
48.67 48.58 84.24 84.16 86.39 70.36 64.86 40.76 21.32 18.49 40.41 50.42 44.8 52.44 47.01 38.51
5.94 32.66 34.29 30.41 19.4 23.54 3.48 2.07 4.32 4.79 2.71 4.1 3.74 4.92 0.46 4.72
8.08 19.85 12.81 16.42 10.83 10.89 1.96 3.14 0.94 0.65 0.28 0.39 25.99 21.02 6.14 23.3
1.67 195.15 153.5 144.61 90.34 115.84 5.9 2.99 0.54 0.81 7.22 6.89 3.62 5.51 14.84 4.71
0.11 0.22 0.13 0.19 0.26 0.13 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.06
30.79 70.17 189.99 158.72 190.49 65.97 8.15 74.71 19.85 22.8 36.4 85.62 13.74 12.72 19.21 11.7
0.0 1.39 1.13 1.27 0.83 0.21 0.13 0.03 0.0 0.0 0.0 0.06 0.0 0.15 0.31 0.0
0.0 0.14 0.02 0.35 0.2 0.05 0.0 0.04 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0
8.45 23.07 14.65 38.48 13.66 14.65 0.0 0.25 0.33 1.26 0.0 0.0 0.0 0.0 0.0 0.0
0.08 0.47 0.5 0.71 0.81 0.4 0.2 0.1 0.0 0.12 0.0 0.0 3.96 4.67 1.42 1.47
14.28 19.97 16.59 21.74 16.38 9.42 6.56 2.82 8.99 6.29 7.06 8.48 4.85 4.24 3.81 6.09
0.05 1.04 0.74 0.77 0.39 0.43 0.16 0.05 0.02 0.02 0.19 0.07 0.29 0.11 0.57 0.11
10.6 30.09 38.71 43.25 40.02 10.76 18.72 29.95 12.46 12.39 9.48 11.65 52.28 41.66 32.9 56.79
6.41 27.19 50.9 50.91 31.02 29.86 4.18 8.61 0.35 0.45 8.42 8.29 0.0 0.0 0.0 0.0
16.64 28.48 55.2 64.49 53.16 52.21 13.02 8.95 15.91 16.61 26.58 30.37 14.5 12.19 12.17 15.74
103.35 171.03 97.55 128.5 152.41 85.1 29.62 20.4 32.92 51.38 28.37 38.41 85.7 46.72 61.67 122.91
1.96 6.31 8.63 6.47 7.51 8.65 1.48 2.2 2.63 5.31 2.06 1.49 5.7 8.59 2.7 6.14
71.07 309.43 206.96 243.38 240.9 209.76 85.67 98.18 57.31 66.23 96.28 68.08 38.17 36.32 41.9 41.24
1.92 15.49 14.51 8.1 6.59 10.91 1.48 2.15 0.0 0.0 0.0 1.31 0.0 0.59 7.51 0.58
0.0 2.37 0.79 1.35 0.1 0.81 0.0 0.02 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0
1.84 13.16 7.32 6.74 6.34 5.64 1.69 0.64 0.0 0.0 0.22 0.75 3.26 3.05 10.46 4.1
103.66 129.5 238.1 244.34 211.8 206.7 135.08 92.52 34.21 39.05 106.67 118.69 105.28 82.72 72.3 98.38
10.92 18.5 45.02 32.54 44.94 25.36 10.05 26.28 15.56 23.09 16.55 23.28 12.65 6.8 8.67 13.88
0.16 3.02 3.85 3.08 1.77 2.0 0.04 0.32 0.03 0.22 3.87 0.65 282.57 684.25 57.77 119.06
14.86 46.27 58.56 51.98 42.86 40.23 15.01 24.0 6.41 5.74 16.21 29.84 23.22 15.79 26.88 30.02
0.0 12.13 10.62 7.16 7.23 10.88 0.0 0.0 0.13 0.13 0.55 0.64 0.0 0.3 2.48 0.0
1.22 12.5 5.19 6.68 1.92 4.2 1.59 0.56 0.62 0.95 0.0 0.92 0.74 0.0 0.0 0.0
0.0 3.87 2.34 2.68 5.12 2.62 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.8 16.19 12.73 10.42 10.35 11.22 0.28 0.28 0.08 0.08 0.65 1.03 8.76 7.7 16.24 10.56
4.68 17.31 9.19 7.81 30.11 8.78 3.42 3.59 3.81 3.96 3.92 5.94 14.67 11.86 38.02 9.18
73.28 120.6 114.17 137.49 149.24 112.43 89.19 46.26 45.77 32.21 55.27 53.72 42.43 54.53 95.45 37.54
0.0 1.76 0.64 0.68 0.69 0.32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.74 0.0 0.0
7.2 35.79 57.84 64.49 68.31 54.75 19.62 17.66 12.69 11.36 35.6 23.34 11.31 7.89 4.68 7.83

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)