Heatmap: Cluster_293 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.16 -0.95 1.78 1.73 0.46 0.6 -1.04 -1.62 -1.72 -1.69 -0.35 -0.09 -1.14 -1.19 -1.44 -0.94
-2.78 -2.42 1.72 1.41 0.86 1.42 -1.89 -2.78 -0.96 -0.34 0.86 0.01 -3.12 -2.91 -2.55 -1.82
-1.27 -3.95 2.02 1.85 1.08 0.72 -0.95 -1.08 -4.84 -4.95 0.31 -0.09 -2.24 -2.49 -2.58 -1.67
- -4.42 1.99 2.24 0.88 1.33 -3.28 -2.99 -1.77 -3.35 0.11 0.24 -8.0 -7.51 -7.02 -7.12
-3.16 -2.43 1.82 1.92 1.17 1.62 -1.67 -6.04 -7.42 -7.94 -1.05 -1.08 -2.19 -1.55 -0.21 -1.52
-4.58 -2.79 2.24 2.21 1.25 1.49 -3.31 -2.1 -7.31 -5.63 -0.9 -1.59 -7.03 -8.93 -4.29 -7.84
-5.67 -10.66 2.39 1.81 1.6 1.67 -5.18 -3.18 -5.75 -3.74 -1.27 -1.59 -6.62 -8.31 - -8.33
-7.08 -2.53 1.96 2.08 0.73 1.62 -1.3 -1.03 -3.67 -4.53 0.08 -0.33 -6.07 -5.58 -7.09 -4.49
-1.16 -5.17 1.7 1.48 0.06 1.16 -2.01 -1.76 - -8.17 -0.68 -0.65 0.51 0.36 -0.83 0.2
- - 2.16 2.25 1.42 1.57 -3.51 -7.35 -4.89 - -0.92 -1.26 -4.58 - - -
-0.95 -2.66 1.93 1.84 1.19 1.61 -2.2 -3.08 -5.18 -3.81 -0.21 -0.17 -3.2 -3.49 -3.45 -2.96
-1.91 -1.52 1.99 1.97 1.23 0.85 -1.45 -1.41 -3.4 -4.31 0.07 -0.73 -2.3 -2.59 -2.16 -2.18
-7.62 -6.95 1.48 1.66 1.29 1.81 -2.23 -2.46 -2.92 -2.13 -0.2 -0.24 -2.41 -1.2 -0.32 -2.44
-4.83 -2.15 2.4 2.13 1.53 1.09 -7.13 -1.22 -9.59 - -3.19 -3.69 -3.0 -3.41 -2.75 -3.98
-8.65 - 1.97 2.29 0.78 1.47 -2.48 -5.96 -1.65 -0.34 -0.22 -0.92 -8.21 - - -8.33
0.18 -1.05 0.84 1.15 0.47 1.02 -0.46 -0.16 -0.7 -0.39 0.31 0.25 -1.26 -1.86 -1.57 -1.0
-1.81 -1.32 1.58 1.79 0.94 1.48 -1.9 -2.39 -1.76 -1.15 0.48 0.3 -3.6 -3.95 -3.54 -3.24
-2.26 -1.8 1.76 1.5 1.06 1.11 -0.73 0.31 -2.06 -1.88 0.03 -0.07 -2.39 -3.62 -5.29 -1.28
-8.94 - 2.3 2.24 1.64 0.84 -2.59 -7.64 -4.15 -5.22 -1.23 -0.37 - -7.35 - -
-6.19 -6.24 1.39 1.94 0.97 1.45 -0.97 -1.84 -3.44 -2.28 0.92 0.65 -4.62 -4.53 -3.08 -3.85
-3.47 -3.69 2.3 1.55 1.59 1.26 -1.35 -3.61 -7.04 -5.15 -0.66 -0.15 -4.31 -3.19 -1.67 -3.85
-5.81 -4.16 1.72 1.74 1.14 1.62 -2.96 -6.74 -0.61 -0.51 0.42 0.23 - -9.6 -7.53 -9.63
-6.49 -10.99 1.84 2.14 1.45 1.88 -2.78 -3.97 -3.07 -2.92 -0.76 -0.88 -7.56 -7.66 -6.59 -
-1.06 -1.58 1.91 1.92 1.45 1.74 -1.01 -4.0 -7.4 -5.67 -1.6 -1.54 -4.18 -4.06 -3.08 -4.06
-5.86 -5.92 1.59 1.71 0.79 1.76 -6.09 -3.62 -0.08 -0.02 0.59 -0.13 - -5.6 -3.53 -
-4.09 -7.14 1.76 2.26 1.26 1.84 -1.12 -4.31 -2.53 -3.26 -0.81 -1.41 -5.63 -6.42 -6.27 -6.02
-3.24 -6.77 1.79 2.19 1.21 1.04 -1.3 -2.43 -3.74 -3.9 0.53 0.26 -4.23 - - -4.36
-3.87 -6.46 1.98 1.52 0.78 1.75 -4.1 -3.51 -0.51 0.06 0.34 -0.23 - - - -
-5.02 -2.43 1.86 1.29 1.19 1.14 -1.91 -3.37 -5.54 -4.16 -0.74 0.39 -1.95 -0.56 0.75 -1.9
-4.73 -6.01 1.46 1.75 1.14 1.93 -4.71 -5.49 -1.68 -1.11 0.04 0.72 -7.58 -5.13 -1.94 -7.11
0.64 -5.6 2.3 2.13 1.17 0.94 -3.16 -4.16 - - -3.83 -3.02 -2.71 -3.45 -2.28 -2.9
-0.63 -0.51 1.66 1.5 1.01 0.98 -1.15 -0.93 -0.63 -0.86 -1.44 -0.92 -1.05 -1.67 -1.21 -1.41
-4.4 - 2.01 1.86 0.53 1.96 -1.2 -2.77 -3.02 -3.53 -0.11 0.14 - -5.46 -3.09 -7.19
-4.41 -3.16 1.9 1.89 1.17 0.48 -0.79 -1.59 - -2.58 -1.74 -0.33 -0.29 -0.92 -1.32 -0.25
-9.15 -11.54 1.74 2.19 1.43 1.78 -1.32 -3.78 -3.43 -2.34 -0.98 -1.54 -3.09 -3.61 -4.73 -3.18
-5.12 - 1.92 1.84 1.24 0.85 -0.47 -0.37 -1.87 -2.33 0.11 0.23 -3.26 -6.67 -4.6 -4.12
-0.72 -1.59 1.59 1.65 1.01 1.35 -1.07 -1.84 -2.59 -2.26 0.22 0.15 -1.92 -2.75 -2.29 -1.57
-1.1 -1.84 1.95 1.83 1.18 1.19 -3.6 -9.05 -6.8 -6.74 0.11 0.57 -4.48 -2.77 -2.92 -1.69
-7.18 -8.81 2.15 1.87 1.1 1.62 -5.01 -7.06 -4.74 -4.22 -0.04 0.55 -5.79 -6.62 -7.72 -3.48
-3.17 -1.35 1.79 1.9 0.67 1.34 -1.49 -2.74 -1.34 -0.6 0.19 0.46 -5.48 -5.45 -4.92 -4.56
-9.82 -5.93 2.39 2.16 1.24 1.21 -1.96 -4.95 -5.32 -6.84 -3.0 -2.38 -1.61 -1.76 -5.16 -1.74
-7.76 -0.97 1.99 2.05 1.41 1.49 -0.24 -1.74 -6.15 -8.67 -1.83 -1.24 - - -6.41 -
-6.51 -0.21 2.22 2.21 1.3 1.21 -2.05 -3.69 -9.97 -9.91 -1.68 -1.18 -10.26 - - -9.38
-3.76 -6.52 2.32 2.16 0.29 1.34 -4.51 -4.03 -5.73 -3.97 0.08 0.52 - - -5.35 -
-8.37 -7.55 1.97 2.06 0.97 1.99 -3.95 -10.16 -6.88 - 0.42 -1.09 -6.58 -6.68 -4.6 -
-0.36 -1.65 1.87 1.8 0.95 1.13 -1.6 -1.58 -5.78 -6.63 -1.41 -1.21 -0.89 -1.03 -0.98 -0.71
-1.86 - 2.06 1.95 1.0 1.39 -5.49 -6.03 -4.18 -3.0 0.47 0.43 -4.64 -7.38 -5.98 -4.76
-3.5 -0.82 1.49 1.71 0.76 1.4 -2.83 -3.34 -2.11 -1.17 -0.32 0.23 -2.61 -1.25 -0.42 -0.44
-1.8 -0.77 1.88 1.84 1.13 1.32 -1.32 -2.93 -3.63 -3.71 0.03 0.12 -3.2 -3.66 -3.25 -3.39
-6.0 -3.81 1.57 2.17 1.02 1.71 -4.23 -4.85 -1.37 -2.11 0.04 0.03 -3.32 -3.4 -3.37 -3.42
-1.43 -1.24 1.57 1.95 1.02 1.72 -2.67 -2.31 -2.82 -2.29 -0.03 -0.04 -2.82 -4.1 -4.89 -2.65
-3.65 -1.65 1.84 1.91 1.55 0.87 -5.39 -6.3 -2.55 -1.81 0.51 0.62 -9.27 -9.04 -4.54 -6.0
-1.22 -1.44 1.4 1.37 1.04 1.01 -1.01 -0.76 0.2 -0.43 0.72 -0.3 -3.28 -3.0 -2.66 -3.58
-2.76 -1.29 1.63 2.04 1.22 1.62 -1.19 -2.53 -2.53 -1.85 -0.19 -0.46 -4.79 -5.89 -4.59 -3.65
-3.2 -3.76 1.99 2.2 1.28 1.35 -1.91 -2.79 -4.99 -6.22 -0.5 -0.58 -3.02 -3.1 -3.58 -3.09
-4.2 -1.45 2.13 1.72 1.22 1.09 -1.38 -4.49 -2.92 -4.27 0.33 0.67 - -8.79 - -8.49
-2.02 -1.75 1.95 1.46 1.44 1.42 -1.88 -1.52 -3.23 -2.03 -0.69 -0.41 -2.39 -1.98 -1.2 -2.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.