1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_259 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-2.54 -5.0 0.19 -0.75 0.58 -0.34 1.26 2.76 - -7.55 -0.68 0.24 -1.67 -2.77 -2.7 -2.38
-3.36 - -2.75 -0.93 -0.72 -1.1 0.11 1.27 - - -4.38 -4.49 1.22 1.32 1.13 1.83
- -1.77 -0.79 -0.87 -0.66 1.35 1.12 2.98 - - -2.12 -0.22 - -1.97 - -
-9.74 -5.4 0.74 0.61 0.5 -0.29 1.49 2.09 -1.72 -0.25 -0.44 -0.06 -2.09 -2.52 -3.48 -2.9
- - - - - -4.39 - -2.53 - -5.32 -4.28 - 1.71 2.05 2.2 1.88
-2.79 1.42 -0.7 0.28 -0.95 1.92 -4.55 2.74 - -2.22 -3.16 - - - - -
-2.29 -1.15 0.2 0.15 0.33 -0.67 1.39 1.41 -0.6 -0.22 0.21 -0.2 -0.55 -0.64 -1.19 -0.7
-5.03 -1.82 -1.19 -1.33 -0.59 0.64 1.57 2.33 -2.5 -3.47 0.69 1.23 -5.06 -3.57 -2.35 -3.77
-0.25 -3.3 -2.67 -2.89 -2.09 -1.99 0.05 2.06 -4.03 -5.87 0.13 1.03 0.4 0.82 0.49 0.44
-3.8 -2.93 -0.42 -1.19 0.18 -1.07 1.69 3.12 -7.0 -5.94 -2.74 -0.32 -5.64 -4.74 - -4.18
-7.0 0.17 -1.77 -1.51 -1.87 -1.33 0.74 2.18 -1.67 -0.57 0.47 0.24 0.2 0.58 -2.28 -0.06
-3.65 -3.31 -1.56 -2.62 -2.65 -1.66 -1.18 0.06 -4.38 -4.73 -2.82 -2.8 2.46 1.52 0.7 1.58
- - -0.94 -2.05 0.7 0.03 1.1 3.16 - -4.56 -2.53 -0.11 - -4.36 -2.29 -3.39
-4.09 - -4.29 - -3.16 - -3.38 -2.19 - - - - 2.21 2.2 0.18 2.36
- - 0.44 0.28 -0.45 0.55 -0.3 2.65 -3.09 -1.52 1.29 0.28 - - - -
- - -0.84 - -2.01 -1.0 -1.22 1.33 - - - - 0.85 1.74 1.9 1.52
-4.69 - 0.37 0.36 -0.22 -0.01 0.26 3.05 -2.08 -1.06 -2.79 -0.71 -5.87 -3.06 -1.2 -5.0
-3.53 - 0.35 -0.32 0.82 -0.22 0.59 2.65 - - -1.69 1.01 -2.43 - -0.46 -2.56
-2.54 -1.68 -0.48 -0.09 0.45 0.11 0.98 2.31 -2.83 -1.81 0.07 1.17 -2.3 -2.23 -2.84 -2.35
-2.23 -1.71 0.38 -0.51 -0.71 -0.16 1.51 2.47 -2.07 -2.6 - - -0.74 -2.83 -0.76 0.88
0.03 -0.45 -1.46 -2.32 -0.93 -0.71 0.6 2.51 -4.7 -3.45 0.67 0.87 -0.43 -1.53 -2.02 -1.11
- - -3.58 -3.66 -3.45 -2.8 -2.3 0.12 -4.41 -3.62 -2.9 -2.2 1.67 1.45 1.59 2.3
- - -2.79 -1.78 -4.98 -1.69 -1.08 0.1 - - - -3.56 0.69 3.21 1.46 -
-5.72 -6.23 -4.09 -3.46 -1.57 -2.5 -1.16 0.33 -7.48 -7.42 -2.38 -1.85 1.52 2.1 2.36 -0.26
0.34 -3.94 -1.2 -1.22 -0.47 -1.05 0.18 0.98 -3.52 -3.2 -1.75 -2.39 1.09 0.93 1.07 1.43
-5.44 -1.87 -0.2 -0.24 1.33 0.06 0.86 2.37 -3.09 - -0.29 0.71 -2.74 - -1.77 -1.28
-0.53 -2.59 -1.18 -0.79 -0.81 -0.75 0.27 1.09 -1.54 -1.44 0.15 0.2 1.15 0.24 -0.56 1.36
-5.95 0.73 0.67 0.19 1.2 0.18 0.14 2.08 -1.22 -2.89 -0.07 0.39 - - - -
-0.05 - -0.97 - -0.86 -1.0 1.26 2.38 - - 0.73 0.94 - -1.17 0.9 -
-1.42 -2.45 -2.43 -2.34 -2.55 -2.27 0.47 1.45 -0.63 -1.4 0.31 0.72 1.2 0.56 0.32 0.72
-3.35 -3.51 -2.22 -2.53 -2.46 -1.53 -1.38 -0.23 -3.55 -4.0 -5.51 -4.29 2.06 2.26 0.31 1.68
- -4.4 -0.01 0.54 -1.01 0.08 0.7 2.07 - - - - 0.78 -0.58 0.17 1.39
-1.44 -2.91 0.61 -0.44 -0.27 -0.89 0.58 2.6 - -3.52 -1.72 -0.08 -0.75 -2.65 -2.58 1.02
-6.1 - -0.91 -0.44 0.56 0.5 1.23 2.41 -4.72 - 0.54 1.31 - - -2.41 -
- 1.36 0.4 0.05 0.99 0.36 -0.27 2.1 - - -0.95 1.12 - - - -
- -3.01 -2.15 -2.55 -1.53 -2.18 0.75 1.83 - - - -0.91 1.77 1.67 0.0 0.64
-3.71 - -2.9 -3.57 -3.51 -5.26 -2.9 -1.75 - - - -5.66 1.88 2.9 0.12 1.54
- - -1.36 -0.03 -0.01 0.58 1.05 2.9 -5.7 - 0.04 0.56 - - -3.38 -
0.86 -2.03 0.02 0.04 0.97 0.49 0.49 1.75 -0.34 -1.3 -0.21 -0.4 -1.18 -2.33 -6.14 -1.78
- - - - - -2.56 -2.2 0.69 - - - -1.95 1.7 0.61 - 3.16
-2.67 1.23 0.17 -0.07 0.88 0.47 -0.38 2.05 -1.24 -0.76 -1.14 0.17 - - -0.53 -
- - -1.16 - - -1.2 -0.51 1.7 - - - - 0.75 - 1.72 2.63
-3.05 - -4.6 -2.68 -4.46 -3.63 -1.94 -0.99 - - -2.94 -2.04 2.27 1.47 0.29 2.48
- - -1.78 1.14 0.36 0.18 1.64 2.63 - - -0.12 -0.23 - - - -
-3.32 -3.06 -0.86 -0.91 0.03 0.61 -0.23 2.65 -4.01 -3.94 0.55 0.99 -1.65 -3.74 -0.09 -2.77
-1.23 -2.93 -0.6 -0.67 -0.21 -0.19 0.36 2.04 -1.46 -1.44 -0.03 0.26 0.27 -0.21 -0.22 0.23
- -4.37 0.44 0.47 -0.72 0.35 1.44 2.34 -3.43 -2.37 -2.32 -3.44 -1.1 -0.61 0.7 -2.23
- - -2.38 - -1.25 -1.09 1.67 2.85 -2.8 - 0.61 1.51 - - - -
- - 0.01 -1.24 - - 1.46 3.06 - - - -0.0 - - 1.31 -
-1.17 -5.51 -0.16 -0.73 -0.7 -0.55 -0.23 0.82 -6.23 -5.59 -3.14 -2.2 1.43 1.14 0.65 1.72
-1.22 1.92 -0.74 -0.82 -0.02 -1.19 0.18 2.54 - - - -0.17 - -1.92 0.15 -
-3.4 - -1.93 -2.48 -2.52 -3.62 -1.52 -0.53 - - -5.01 -3.12 1.8 2.24 1.98 0.91
-5.58 - -4.77 -4.92 - -7.61 -3.66 -2.58 - - - - 2.05 2.47 1.5 1.66
-3.82 -2.92 -2.79 -1.28 -1.9 -1.71 -0.71 -0.08 - -4.84 -3.07 -2.69 0.63 1.49 2.85 0.29
- - -1.19 -0.45 0.82 0.99 1.2 2.82 - - - -0.64 - - 0.11 -
- - -0.6 -0.75 -0.71 -2.43 1.47 2.8 -2.8 -2.74 -1.12 -2.81 - - - 1.74
-4.22 -3.01 0.13 -0.33 0.28 0.83 0.23 2.96 -4.7 -3.06 -3.93 -2.51 -0.68 -0.92 -3.71 -1.48
-5.48 -7.23 -0.99 -1.18 -1.54 -0.36 -0.48 1.59 -4.57 -3.51 0.03 -1.46 1.56 0.78 0.34 1.45
-2.67 -1.9 -2.58 -0.61 - -1.45 -0.21 0.85 - -3.09 -1.94 -4.23 1.06 1.86 1.74 1.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.