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Heatmap: Cluster_225 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - 2.58 1.67 -0.32 -0.81 -0.97 -0.71 -3.66 -3.76 1.62 -0.69 -2.83 -1.73 -4.66 -5.76
-2.52 -3.03 1.66 1.89 0.12 1.31 -2.85 -3.79 -7.22 -4.42 0.86 0.67 -0.98 -1.47 -1.95 -1.12
-0.75 -0.03 1.17 1.14 0.47 -0.21 -0.76 -1.39 0.09 0.11 0.21 0.75 -1.19 -1.22 -1.64 -0.79
- - 2.08 2.01 0.88 -0.18 -2.07 -3.91 -5.22 -3.58 0.17 1.8 - - - -
-2.87 -2.0 1.61 1.67 0.01 0.47 0.2 -1.41 -0.33 -0.27 1.1 0.12 -2.38 -3.01 -3.51 -2.19
-1.74 -3.48 0.46 0.67 -1.0 -0.69 -0.75 -1.09 -2.8 -2.87 -0.48 -0.79 0.93 1.71 1.3 0.32
- - 2.27 2.42 0.43 -3.44 0.51 -3.47 - - - 1.54 - - - -
-1.66 -2.44 0.33 0.3 0.16 -0.3 -0.07 -0.57 -0.79 -1.03 -0.17 -0.29 1.03 0.82 -0.05 0.93
-4.62 - 1.59 1.59 -0.7 -0.28 - -2.83 - -3.2 0.74 -3.27 1.25 1.84 -0.94 -
-0.18 -0.63 0.52 0.7 0.1 0.2 0.23 -0.68 -0.53 -0.2 0.41 0.3 -0.27 -0.34 -1.0 0.23
-0.48 -0.7 1.2 0.77 0.48 -0.61 0.46 -0.14 -0.09 0.3 0.17 0.29 -1.24 -1.33 -0.88 -1.17
-0.21 -0.7 1.07 0.94 0.29 0.19 -0.65 -0.55 -0.61 0.07 0.22 0.38 -0.83 -0.98 -0.23 -0.48
-3.01 -2.11 1.31 2.06 -0.45 0.79 -0.1 -8.37 -0.92 -1.35 0.89 1.22 -3.81 -3.32 -3.84 -2.13
-2.17 -2.33 1.35 1.8 1.02 0.22 -0.71 -2.49 -4.14 -2.95 1.2 1.1 -1.81 -2.9 -3.57 -1.21
-0.37 -0.26 1.49 1.81 0.78 -0.37 -0.42 -0.12 -3.04 -2.27 0.32 0.3 -1.73 -1.85 -1.94 -1.9
-0.87 -1.14 0.61 0.88 -0.22 -0.08 0.17 -0.27 -0.44 -0.25 0.51 0.37 0.03 -0.26 -0.4 -0.07
- - 1.65 2.17 1.12 -0.33 -0.95 -5.03 -9.08 -7.44 1.73 0.6 - - - -
- - 2.14 1.98 - -2.29 -0.12 - - - 0.74 0.9 - - 0.63 0.53
-3.42 -3.93 1.99 1.93 -0.15 0.06 0.91 -2.27 -1.46 -1.85 0.65 0.68 -6.4 -5.32 -3.84 -3.52
-0.39 -0.67 0.96 1.29 0.45 -0.24 -0.41 -1.15 -0.32 -0.5 0.46 0.73 -0.64 -0.84 -1.27 -0.63
-1.05 -1.41 0.91 1.08 0.22 0.58 -0.13 -0.54 0.24 -0.2 0.56 0.41 -0.87 -1.26 -1.46 -0.51
- - 0.69 0.78 -1.86 -0.48 -2.28 -4.06 -4.73 - -0.83 -2.42 1.06 -1.68 -1.42 2.97
- - 1.25 1.1 -1.02 -0.19 -1.89 -3.25 - - 0.45 -0.21 1.03 0.65 0.67 1.2
-1.62 - 0.74 1.84 1.5 0.78 0.7 -6.25 - -2.94 1.1 0.99 - - - -
-0.03 -3.05 1.22 1.53 -0.07 0.31 -0.26 -0.56 -2.17 -2.44 0.46 -0.12 -0.23 -0.27 -0.57 -0.15
-2.65 -2.79 1.42 1.89 0.28 0.62 -1.82 -2.13 -1.43 -0.81 1.06 1.31 -2.42 -3.3 -4.03 -2.26
-0.92 -1.71 1.71 1.86 0.66 0.31 -2.11 -2.34 -1.93 -1.46 0.65 1.0 -2.62 -2.58 -2.77 -1.62
-1.68 -1.37 1.1 1.7 0.65 0.58 0.14 -1.82 -1.17 -1.16 0.73 1.31 -3.15 -3.66 -3.18 -2.82
-2.8 -2.84 1.44 1.59 0.04 0.88 -0.92 -0.69 -0.49 -0.32 -0.16 0.16 -0.64 -0.5 -0.82 -0.89
-1.17 -1.14 1.06 0.62 0.08 -0.49 0.25 -0.49 -0.34 -0.45 0.54 0.55 0.17 -1.05 -1.21 0.4
-6.26 - 1.76 2.69 0.15 -1.61 -4.64 -6.18 -5.61 -1.97 1.82 -0.29 - -5.37 - -5.99
- - 1.41 1.69 0.82 1.09 -3.55 -4.14 -0.09 -0.89 1.06 1.34 - - - -
- - 1.92 2.05 -1.58 -5.04 -0.59 -2.6 -0.64 0.12 1.4 1.21 -3.46 -7.37 - -3.22
-0.87 -1.24 0.78 1.31 0.33 0.13 0.44 -0.29 -0.7 -0.29 0.71 0.55 -0.99 -1.4 -1.57 -0.87
-5.74 - 2.03 1.96 0.21 -1.82 -2.53 - -3.46 - 1.54 0.62 - -2.08 0.7 -
- -4.14 1.76 1.98 0.3 0.03 1.24 -4.67 -5.41 -3.17 1.1 0.65 -5.37 -5.88 -4.0 -5.49
-3.04 -3.33 1.35 1.66 0.46 0.82 -1.4 -2.39 -0.5 0.14 0.95 0.64 -1.68 -2.0 -2.39 -1.69
-1.59 -1.45 1.22 1.24 0.91 0.54 -0.56 -0.9 -0.35 -0.39 0.61 0.8 -1.63 -1.93 -2.06 -1.23
-2.6 -0.68 1.45 1.55 0.12 0.74 -0.33 -1.53 -0.19 0.03 0.98 0.54 -3.18 -3.82 -4.69 -3.44
-4.01 -2.45 1.69 1.82 0.68 0.59 -0.44 -2.37 -0.85 -0.86 0.71 1.13 - -7.68 -5.61 -
-2.15 -4.38 1.61 1.62 0.62 0.76 -2.37 -3.16 -2.13 -2.24 1.17 1.07 -1.76 -2.3 -1.85 -1.03
-4.44 -6.06 1.61 1.9 0.03 0.62 -1.28 -1.87 -1.74 -1.48 1.51 -0.23 -2.61 -0.23 -1.64 -2.32
-3.4 - 1.83 2.05 0.38 0.45 -4.34 0.08 -2.32 -0.94 1.65 -2.06 -2.98 -2.38 - -4.69
-1.81 -2.22 1.35 1.37 0.82 -0.5 0.39 -0.68 -1.1 -0.95 0.8 1.18 -1.73 -2.02 -2.77 -1.77
-1.1 -1.82 0.5 0.59 -0.02 -0.57 -0.25 -0.01 -0.29 -0.31 -0.1 0.3 0.5 0.36 0.01 0.43
-0.69 -1.12 0.47 0.75 -0.56 -0.46 -0.18 -0.83 -0.46 -0.68 0.29 0.04 0.62 0.59 -0.19 0.57
-0.32 -0.96 1.07 1.26 0.78 -0.81 0.22 -0.05 -0.32 -1.13 0.18 0.82 -1.38 -1.27 -1.15 -1.41
-0.27 -2.01 0.79 1.01 -0.18 -0.51 -0.09 -0.53 -0.28 -0.22 0.38 0.39 -0.12 -0.22 -0.24 0.09
-6.07 -8.02 2.04 1.69 1.6 0.3 -6.68 -6.72 -7.09 -5.09 1.3 0.88 - - - -
-4.68 - 2.26 1.11 0.81 -0.22 -0.6 -5.35 - -6.71 0.39 2.13 - - -5.46 -
-0.96 -0.95 0.86 0.97 0.22 -0.2 -0.17 -0.75 0.01 -0.01 0.5 0.78 -0.07 -1.08 -1.55 -0.34
-0.88 -1.32 1.53 1.8 0.89 0.04 -0.26 -0.8 -2.11 -3.23 0.64 0.77 -2.17 -2.13 -2.89 -2.24
- - 1.36 1.6 0.23 0.81 -4.26 -1.8 -3.01 0.05 1.41 -0.21 - - 1.29 -
-3.68 - 2.02 1.98 -0.29 1.71 - -5.43 -2.67 -2.04 1.12 0.31 - - - -
- -5.83 1.51 1.66 1.1 0.2 1.46 -6.38 - - 0.4 1.31 -5.73 -6.83 -3.76 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.