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Heatmap: Cluster_310 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.42 -0.96 -1.15 -0.42 -0.97 0.27 1.42 0.83 -1.98 -1.83 1.36 1.04 -0.33 -1.63 -2.91 -0.08
0.1 -1.41 -1.4 -1.13 -0.68 -0.73 -0.17 -0.8 -1.47 -1.63 0.03 -0.22 1.32 1.14 0.73 1.08
0.1 -0.22 -0.41 -0.26 -0.48 -0.05 1.11 -0.01 -0.19 -0.28 0.88 0.67 -0.88 -0.63 -1.35 -0.1
-0.13 -1.25 -0.41 -0.88 -0.02 -0.16 0.6 0.19 -1.53 -0.09 0.94 0.95 -0.12 -0.27 -0.22 0.13
-0.13 -3.34 -0.81 -1.01 0.0 -0.05 0.34 0.28 -7.06 -6.06 0.74 1.38 0.46 0.3 0.1 0.59
-0.76 -2.03 -2.12 -2.0 -1.57 -0.47 0.13 0.02 -2.19 -2.3 0.35 0.2 1.3 1.14 0.36 1.45
-0.22 -1.84 -2.31 -2.48 -1.41 -1.13 0.44 -0.96 -2.18 -0.67 0.77 0.01 1.1 1.27 0.91 0.84
0.11 -0.58 -0.9 -0.59 0.1 -0.48 0.57 0.17 -0.62 -1.16 0.64 0.75 0.41 0.08 -0.25 0.12
-0.19 -0.52 -1.83 -2.78 -1.35 -1.97 1.27 -1.06 -1.27 -2.27 1.17 0.64 0.48 0.71 0.64 0.53
0.19 -0.41 -0.53 -1.04 0.21 0.03 -0.18 -1.01 -0.89 -1.39 1.28 1.16 -0.19 -0.31 -0.54 0.49
-0.14 -1.85 -0.82 -1.3 -0.65 0.01 0.27 -0.59 -0.96 -0.55 0.61 0.2 0.86 0.66 0.45 0.76
0.09 -0.65 -0.89 -0.29 -0.19 -0.03 1.31 -0.25 0.13 0.25 1.01 0.52 -0.83 -1.35 -1.46 -0.48
0.17 -1.18 -0.22 -1.28 -0.26 -0.46 0.42 -1.4 -1.5 -1.22 0.73 0.7 0.48 0.51 0.52 0.65
0.13 -1.93 -0.98 -1.46 -0.4 -0.54 0.21 -0.36 -1.03 -0.94 0.95 0.62 0.74 0.6 0.28 0.6
-0.0 -1.33 -0.79 -1.64 -0.74 -0.52 -0.1 -0.73 -0.4 -0.95 0.43 0.39 0.91 0.95 0.79 0.47
-0.1 -0.4 -1.37 -1.04 -0.8 -0.37 0.93 0.35 -1.04 -0.96 0.91 0.69 0.31 0.03 -0.35 0.45
-0.27 -1.34 -1.21 -1.65 -0.71 -0.18 0.77 -0.24 -1.17 -0.48 0.58 0.27 0.65 0.73 0.58 0.49
0.46 -1.05 -0.14 -0.78 -0.49 -0.28 0.2 -0.83 -1.39 -1.17 0.53 0.37 0.43 0.61 0.59 0.54
0.05 -1.98 -1.33 -1.33 -0.35 0.17 0.39 0.57 -1.3 -0.9 1.54 1.0 0.1 -0.31 -0.8 -0.13
-0.08 -1.59 -0.86 -0.69 -0.46 -0.33 1.17 -0.5 -0.6 -0.4 0.49 0.21 0.63 -0.06 -1.03 1.08
-0.34 -0.89 -1.44 -1.57 -0.8 -0.66 0.8 -0.75 -1.46 -1.21 1.03 0.5 0.81 0.72 0.19 0.7
0.38 -1.06 -1.43 -2.23 -0.76 -0.38 0.82 -0.86 -1.72 0.03 0.79 0.3 0.59 0.65 0.52 0.23
-0.62 -1.89 -1.07 -0.28 0.36 0.75 0.43 0.28 -3.41 -2.61 1.54 1.24 -0.19 -0.74 -1.16 -0.31
-0.49 -1.49 -1.54 -1.67 -2.04 -0.86 1.26 -0.07 -3.76 -4.44 1.26 0.67 1.06 0.14 -0.8 1.18
-0.12 -0.95 -0.66 -0.36 -0.21 0.33 0.56 -0.04 -0.76 -0.84 0.59 0.43 0.47 0.07 -0.25 0.38
-0.06 -0.47 -0.68 -1.62 -0.4 -0.01 0.2 0.64 -4.51 -2.59 0.84 1.06 0.53 0.07 -0.25 0.57
0.18 -0.57 -0.49 -0.27 -0.18 -0.05 0.6 -0.17 -0.56 -0.29 0.95 0.58 -0.16 -0.31 -0.39 0.01
-0.09 -2.07 -1.37 -1.38 -0.55 -0.64 0.2 0.21 -2.08 -1.49 0.59 0.56 1.02 0.77 0.19 0.99
-0.45 -1.82 -1.52 -1.4 -0.86 0.07 0.02 -0.56 -4.19 -5.06 0.55 0.41 0.92 0.78 1.02 1.3
0.03 -0.7 -0.52 -1.09 -0.48 -0.28 0.07 -0.86 -0.88 -0.88 0.26 0.1 0.86 0.82 1.0 0.16
-0.0 -2.77 -2.15 -2.32 -2.02 -0.86 0.33 -0.54 -2.85 -2.79 -0.83 -0.33 1.26 1.36 1.31 1.38
0.14 -0.65 -0.85 -0.42 -0.41 -0.03 0.93 -0.46 -0.6 -0.22 0.85 0.52 -0.03 -0.24 -0.33 0.29
-0.27 -1.28 -1.02 -1.29 -0.49 -0.73 -0.1 -0.17 -3.01 -2.04 0.3 0.03 0.73 0.86 0.48 1.69
1.02 -0.84 -0.39 -0.68 -0.67 -0.61 0.64 0.05 -5.37 -7.36 0.64 0.9 0.11 0.22 0.28 0.32
-0.48 -0.69 -3.1 -3.08 -0.41 -0.52 0.24 -1.26 -2.52 -2.73 0.34 0.46 1.01 1.26 1.36 0.52
0.19 -1.46 -0.73 -0.74 -0.79 -0.64 0.29 -0.61 -0.96 -1.37 0.14 0.61 0.57 0.8 0.8 0.76
1.0 -0.64 -0.58 -1.87 -0.71 -0.4 0.3 -1.23 -1.85 -1.41 0.75 0.49 0.44 0.43 0.64 0.48
0.45 -2.25 -1.29 -1.67 -0.34 -0.16 -0.09 -0.13 -4.05 -5.47 0.89 1.39 0.66 0.54 0.23 0.48
-0.09 -0.66 -0.3 -0.95 -0.23 -0.3 0.14 -0.93 -1.13 -0.37 0.19 0.43 0.83 0.57 0.38 0.6
-0.44 -0.82 -0.67 -0.32 -0.32 -0.39 1.38 0.12 -0.65 -1.24 1.6 1.49 -1.73 -1.85 -2.24 -1.6
0.49 -0.47 -0.19 -1.3 -0.41 -0.33 0.51 -0.69 -0.86 -1.01 0.1 0.44 -0.18 0.51 1.16 -0.01
-0.02 -0.39 -0.77 -1.39 -0.22 0.17 0.6 -0.85 -0.82 -1.48 0.64 0.42 0.7 0.44 -0.34 0.72
-0.18 -1.26 -0.69 -1.25 -0.56 -0.12 0.51 -0.6 -1.15 -0.82 0.57 0.34 0.67 0.64 0.61 0.61
0.59 -0.03 -0.05 0.13 0.03 -0.23 0.3 -0.56 -1.53 -1.73 1.31 1.36 -0.98 -0.85 -0.95 -1.33
-0.33 -2.11 -1.42 -2.19 -1.14 -0.34 0.6 0.44 -3.89 -4.01 1.04 1.13 0.61 1.13 -0.24 0.41
0.26 -1.24 -0.43 -1.2 -0.59 -0.27 0.34 -0.83 -0.57 -0.35 0.58 0.43 0.34 0.59 0.64 0.32
0.06 -6.58 -1.62 -1.94 -0.11 -0.18 1.21 -0.47 -0.31 -0.06 0.51 0.23 0.16 0.42 -1.6 1.24
-0.38 -1.22 -0.69 -0.97 0.28 -0.22 0.32 -0.17 -0.29 -0.26 0.34 0.47 0.04 0.27 0.91 0.05
0.15 -2.18 -1.08 -1.46 -0.48 0.01 0.18 -0.5 -1.3 -1.45 1.03 1.07 0.34 0.5 0.62 0.18
-2.04 - -1.45 -0.56 -0.88 0.36 2.22 0.09 -2.97 -2.04 2.2 1.12 - - -5.8 -
0.38 -0.31 -0.3 -0.5 -0.03 -0.38 0.69 -0.4 -0.54 -0.38 0.33 0.68 -0.17 -0.11 -0.84 0.64
-5.14 -3.05 -3.58 -3.66 -0.76 -0.64 2.22 0.58 - -4.21 2.31 1.43 -1.55 -3.34 - -2.56
0.7 -0.9 -0.24 0.01 0.35 0.2 -0.37 -1.12 -5.19 -7.43 1.99 1.72 -2.09 -1.4 -2.57 -1.91
0.31 -1.06 -0.28 -0.89 -0.89 -0.32 0.44 -0.46 -0.96 -0.91 0.24 0.47 0.32 0.63 0.82 0.42
-0.2 -0.68 -0.62 -0.66 -0.37 -0.19 0.48 -0.39 -0.04 -0.83 0.61 0.59 0.44 0.46 0.24 -0.11
0.41 -0.21 -0.75 -0.28 -0.26 0.46 1.0 0.0 -0.7 -1.18 1.02 0.68 -0.37 -0.99 -1.17 -0.36
-0.97 0.11 -1.11 -3.28 -0.39 -0.35 1.08 -0.57 - -4.56 1.55 1.0 0.63 0.38 -0.72 0.12
-0.9 -1.81 -1.41 -1.74 -1.13 -0.3 -0.16 -1.01 -1.99 -1.71 0.55 -0.22 1.13 1.62 1.35 0.2
0.39 -1.16 -0.88 -0.59 0.04 -0.53 0.63 0.28 -0.57 -0.42 0.58 0.61 0.47 -0.26 -0.55 0.29
-0.5 -2.5 -2.48 -2.61 -1.81 -0.79 0.18 0.14 -2.76 -2.56 0.92 0.73 1.3 0.9 0.41 1.1
-0.92 -3.4 -2.32 -3.35 -2.31 -1.86 0.42 -0.91 -2.69 -1.56 0.47 0.01 1.31 1.49 1.36 1.01
0.13 0.04 -0.79 -0.75 0.1 0.4 0.37 -1.16 -1.23 -2.52 1.01 1.22 -0.03 -0.06 -0.46 -0.07
-0.65 -0.36 -1.47 -0.68 -0.36 0.19 0.57 0.07 -3.85 -3.18 1.12 0.78 0.83 -0.11 -0.72 0.83
-0.36 -1.08 -1.38 -1.08 -1.04 -1.51 0.25 -0.3 -0.9 -1.62 0.62 0.17 1.4 0.56 0.29 1.13
0.01 -2.07 -1.54 -2.09 -1.4 -0.98 0.23 -1.06 -1.33 -0.45 0.52 0.1 1.12 0.9 0.98 0.99
0.21 -0.84 -0.42 -1.26 -0.49 -0.4 0.21 -0.76 -1.44 -1.64 -0.02 0.46 0.82 0.87 0.74 0.66
-0.05 -1.89 -0.61 -0.62 -0.9 0.17 1.76 -0.98 -0.79 -0.41 1.3 0.41 -0.04 -0.48 -2.15 -0.25
0.39 -0.07 0.17 -0.43 0.03 -0.27 -0.32 -0.59 -1.68 -1.22 1.64 1.51 -1.23 -1.1 -1.16 -0.96
0.43 -4.69 -1.16 -2.46 -0.61 -1.16 0.93 -0.56 -5.31 -5.87 0.13 0.55 1.41 1.18 -0.54 1.06
-0.18 -1.54 -1.26 -1.84 -0.85 -0.4 -0.78 -1.3 -2.98 -2.75 0.43 0.27 1.29 0.96 0.54 1.63
-0.66 -2.75 -1.16 -1.15 -1.38 -0.53 0.18 -0.35 -0.91 -1.69 0.39 0.41 1.19 1.16 0.49 0.93
0.18 0.07 -0.31 -0.14 -0.14 0.11 1.34 0.08 -0.29 0.0 1.13 0.54 -2.24 -2.3 -2.03 -1.32
0.38 -2.67 -0.32 -0.01 0.05 -0.54 1.28 0.47 -7.09 -7.03 1.68 1.54 -1.68 -1.78 -2.47 -1.68
0.36 -2.77 -0.69 -0.76 -0.54 -0.94 0.72 -0.13 -1.43 -1.14 0.82 0.92 0.66 -0.27 -0.23 0.89
-0.13 -0.79 -1.23 -2.13 -0.77 -0.46 0.46 -0.72 -1.27 -0.35 0.49 0.34 0.93 0.93 0.62 0.42
-0.16 -1.68 -0.65 -1.15 -0.64 -0.71 0.21 -0.87 -1.41 -1.07 0.38 0.09 1.16 0.86 0.97 0.61
-0.22 -0.9 -1.22 -0.33 0.23 0.71 1.35 -0.35 -1.03 -1.34 0.93 0.63 -0.1 -0.75 -1.88 0.13
0.56 -0.08 -0.03 -0.14 0.01 0.08 0.75 -1.14 -2.04 -1.78 1.14 1.16 -0.48 -0.82 -1.49 -0.17
0.22 -0.96 -1.0 -0.45 -0.14 0.06 1.11 0.02 0.18 0.19 0.82 0.65 -1.09 -0.93 -0.73 -0.4
-0.4 -1.39 -0.57 -1.11 0.35 0.23 0.66 0.46 -0.72 0.42 0.69 1.44 -1.33 -1.04 -0.57 -1.04
-1.96 -1.36 -2.58 -2.81 -2.69 -1.92 1.25 0.53 -1.53 -1.58 1.49 0.85 0.58 0.4 -0.23 0.87
-0.62 -1.18 -1.09 -1.3 -0.8 -0.72 0.32 -0.45 -1.98 -2.24 0.69 0.08 1.19 1.02 0.74 0.82
0.04 -0.67 -0.87 -1.12 -0.39 -0.41 0.19 -0.4 -2.13 -1.34 0.44 0.62 0.8 0.66 0.15 0.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.