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Heatmap: Cluster_310 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
17.38 11.93 10.49 17.38 11.9 28.12 62.08 41.43 5.91 6.56 59.87 47.76 18.52 7.5 3.09 22.0
8.03 2.81 2.83 3.42 4.65 4.51 6.64 4.29 2.7 2.41 7.64 6.43 18.61 16.45 12.41 15.78
29.18 23.44 20.48 22.81 19.47 26.33 58.58 27.08 23.79 22.44 50.24 43.39 14.74 17.57 10.66 25.41
13.57 6.24 11.14 8.04 14.62 13.23 22.38 16.93 5.11 13.92 28.48 28.6 13.61 12.29 12.68 16.18
770.59 82.81 478.87 416.46 843.27 811.09 1061.6 1019.71 6.3 12.61 1407.73 2180.36 1154.22 1036.92 900.38 1264.5
13.9 5.76 5.44 5.91 7.96 16.97 25.73 23.98 5.15 4.79 30.11 27.05 57.84 52.01 30.25 64.3
11.07 3.6 2.59 2.31 4.86 5.9 17.43 6.63 2.84 8.11 21.96 12.97 27.6 31.02 24.22 23.0
64.04 39.55 31.83 39.45 63.51 42.6 87.72 66.73 38.48 26.46 92.44 99.76 78.56 62.53 49.69 64.33
43.77 34.78 13.99 7.28 19.57 12.75 120.25 23.98 20.61 10.37 112.0 77.82 69.41 81.81 77.66 72.1
7.82 5.15 4.76 3.34 7.95 7.03 6.07 3.41 3.71 2.63 16.64 15.38 6.02 5.52 4.73 9.61
19.08 5.86 11.97 8.54 13.44 21.3 25.34 14.04 10.82 14.4 32.12 24.26 38.3 33.35 28.79 35.78
56.42 33.86 28.66 43.41 46.69 52.02 131.39 44.7 57.98 63.34 107.33 76.15 29.96 20.91 19.3 37.99
36.46 14.38 27.85 13.4 27.08 23.65 43.46 12.3 11.51 13.97 53.68 52.85 45.24 46.11 46.47 51.02
21.93 5.29 10.17 7.29 15.21 13.81 23.32 15.63 9.87 10.49 38.82 30.78 33.49 30.56 24.32 30.53
57.93 23.1 33.52 18.68 34.83 40.59 54.29 34.92 44.03 30.09 78.47 76.23 109.19 112.1 100.42 80.55
13.95 11.28 5.8 7.26 8.56 11.57 28.51 18.99 7.26 7.65 28.04 24.16 18.5 15.29 11.68 20.4
15.97 7.62 8.35 6.13 11.75 16.98 32.93 16.32 8.54 13.82 28.73 23.18 30.25 31.91 28.81 26.99
215.06 75.76 142.17 91.14 111.81 128.82 179.79 88.27 59.91 69.52 226.05 203.09 211.52 239.3 236.44 227.09
36.79 9.0 14.12 14.1 27.86 39.93 46.48 52.81 14.47 18.99 103.06 70.85 38.01 28.67 20.46 32.49
24.51 8.64 14.26 16.08 18.81 20.65 58.33 18.35 17.07 19.67 36.32 29.96 40.17 24.9 12.71 54.68
8.57 5.87 4.01 3.66 6.26 6.87 18.88 6.45 3.94 4.71 22.26 15.36 19.11 17.88 12.44 17.65
65.7 24.26 18.8 10.75 29.78 38.99 89.08 27.83 15.33 51.75 87.36 62.38 76.18 79.47 72.35 59.49
5.44 2.26 3.98 6.86 10.73 14.05 11.3 10.12 0.79 1.37 24.26 19.71 7.34 5.01 3.74 6.74
6.01 3.0 2.9 2.64 2.05 4.64 20.17 8.0 0.62 0.39 20.08 13.37 17.57 9.29 4.82 19.03
13.08 7.35 8.98 11.08 12.32 17.85 20.92 13.8 8.37 7.91 21.44 19.17 19.69 14.91 11.96 18.51
18.44 13.82 11.96 6.24 14.57 19.05 21.95 29.89 0.84 3.19 34.4 40.03 27.61 20.15 16.09 28.43
25.35 15.06 15.91 18.53 19.62 21.51 33.75 19.76 15.13 18.24 43.15 33.33 20.0 18.0 16.97 22.52
16.5 4.17 6.78 6.76 11.95 11.28 20.1 20.27 4.16 6.24 26.47 25.8 35.52 29.88 20.08 34.78
7.19 2.8 3.42 3.73 5.41 10.31 9.97 6.68 0.54 0.29 14.38 13.1 18.62 16.87 19.98 24.26
15.51 9.32 10.58 7.12 10.85 12.5 15.89 8.37 8.23 8.26 18.22 16.23 27.59 26.8 30.25 16.95
2.5 0.37 0.56 0.5 0.62 1.38 3.16 1.73 0.35 0.36 1.41 2.0 6.0 6.45 6.21 6.54
37.41 21.64 18.82 25.26 25.49 33.25 64.42 24.67 22.28 28.98 60.98 48.56 33.09 28.77 27.0 41.36
2.17 1.08 1.29 1.07 1.87 1.58 2.45 2.32 0.33 0.64 3.22 2.67 4.35 4.75 3.67 8.46
312.69 86.31 117.92 96.02 97.19 101.0 239.96 159.56 3.72 0.94 240.57 287.36 166.27 179.15 187.17 192.81
11.76 10.22 1.91 1.94 12.4 11.48 19.43 6.88 2.87 2.48 20.81 22.67 33.0 39.42 42.09 23.52
562.7 179.29 296.8 296.36 284.7 317.5 602.86 322.75 252.83 190.96 544.51 750.47 734.55 860.55 861.15 834.64
70.39 22.55 23.59 9.65 21.54 26.64 43.2 14.99 9.75 13.28 59.04 49.31 47.64 47.36 54.93 49.05
361.2 55.82 108.58 83.39 209.14 237.54 248.9 242.46 16.0 5.99 491.59 692.71 418.86 384.5 311.36 368.26
37.81 25.49 32.61 20.88 34.33 32.77 44.32 21.11 18.37 31.2 46.03 54.17 71.34 59.6 52.15 61.14
37.56 28.92 32.03 41.02 40.84 38.94 132.92 55.61 32.5 21.58 154.67 143.74 15.38 14.17 10.84 16.91
183.1 93.95 113.8 52.7 97.72 103.38 184.83 80.84 71.79 64.55 139.37 176.02 114.98 185.44 290.25 128.91
21.61 16.74 12.87 8.36 18.84 24.62 33.17 12.18 12.39 7.85 34.22 29.27 35.58 29.83 17.35 36.02
75.44 35.86 53.26 36.16 58.12 78.78 122.16 56.39 38.52 48.54 127.31 108.57 136.64 133.89 131.14 130.54
652.55 423.56 418.47 473.21 442.55 369.67 534.77 294.83 150.29 130.41 1078.46 1111.59 219.88 240.56 223.95 171.98
28.4 8.26 13.31 7.83 16.14 28.1 54.12 48.55 2.4 2.21 73.11 77.92 54.54 78.06 30.31 47.53
131.93 46.89 82.02 48.13 73.29 91.39 140.12 62.32 74.69 86.99 165.54 149.33 139.59 166.59 171.96 137.97
1.15 0.01 0.36 0.29 1.03 0.98 2.57 0.8 0.9 1.06 1.58 1.3 1.24 1.48 0.37 2.62
115.97 64.82 93.63 76.83 182.97 129.36 188.5 134.37 123.4 125.65 190.15 209.36 155.26 182.26 282.99 155.54
14.0 2.8 5.98 4.58 9.06 12.74 14.37 8.94 5.14 4.62 25.84 26.65 15.97 17.95 19.42 14.36
5.9 0.0 8.89 16.51 13.22 31.17 113.07 25.84 3.1 5.9 111.29 52.72 0.0 0.0 0.43 0.0
13.09 8.11 8.21 7.13 9.85 7.77 16.26 7.64 6.94 7.73 12.63 16.13 8.98 9.35 5.61 15.73
0.11 0.46 0.32 0.3 2.26 2.46 17.87 5.75 0.0 0.21 18.98 10.32 1.31 0.38 0.0 0.65
164.14 54.25 85.53 101.7 128.98 116.02 78.47 46.66 2.77 0.58 400.49 333.07 23.72 38.22 17.02 26.88
523.24 202.31 346.07 227.01 227.87 337.86 570.94 306.15 216.06 224.03 498.18 584.9 524.84 651.16 742.01 562.09
65.03 46.62 48.51 47.36 57.93 65.74 104.38 57.06 72.88 42.0 114.48 112.56 101.7 103.18 88.13 69.27
29.63 19.23 13.23 18.32 18.63 30.68 44.4 22.29 13.7 9.82 45.16 35.62 17.21 11.23 9.92 17.32
1.39 2.94 1.27 0.28 2.08 2.15 5.75 1.83 0.0 0.12 8.0 5.46 4.21 3.54 1.65 2.96
1.36 0.72 0.96 0.76 1.17 2.06 2.28 1.26 0.64 0.78 3.72 2.19 5.58 7.84 6.47 2.91
17.12 5.83 7.09 8.63 13.4 9.0 20.11 15.78 8.77 9.72 19.41 19.83 18.01 10.85 8.88 15.92
8.99 2.24 2.27 2.08 3.62 7.36 14.36 13.99 1.88 2.16 23.95 21.1 31.12 23.7 16.84 27.18
95.75 17.16 36.07 17.75 36.42 49.73 240.9 96.24 27.92 61.06 250.47 181.26 448.19 505.6 462.09 363.06
57.84 54.12 30.46 31.34 56.68 69.82 68.3 23.65 22.44 9.21 106.19 123.25 51.58 50.72 38.23 50.35
10.2 12.45 5.81 10.03 12.51 18.24 23.74 16.8 1.11 1.77 34.76 27.5 28.47 14.85 9.73 28.46
2.7 1.64 1.33 1.64 1.68 1.22 4.14 2.82 1.85 1.13 5.31 3.91 9.16 5.1 4.24 7.61
30.1 7.15 10.3 7.05 11.33 15.25 35.06 14.33 11.95 21.87 42.96 32.21 65.31 55.76 59.32 59.62
89.21 43.11 57.37 32.12 54.86 58.33 88.81 45.5 28.28 24.64 75.95 105.89 136.0 141.14 128.42 121.96
7.93 2.21 5.37 5.34 4.41 9.24 27.82 4.15 4.73 6.19 20.25 10.91 7.99 5.88 1.85 6.9
15.38 11.14 13.18 8.69 11.97 9.7 9.41 7.81 3.66 5.03 36.59 33.29 5.0 5.47 5.24 6.01
62.3 1.79 20.57 8.39 30.13 20.64 87.72 31.17 1.16 0.79 50.42 67.67 122.19 104.48 31.8 96.13
7.15 2.78 3.38 2.26 4.49 6.13 4.72 3.28 1.02 1.21 10.91 9.75 19.84 15.78 11.73 24.97
7.71 1.81 5.45 5.51 4.7 8.47 13.81 9.58 6.5 3.79 15.98 16.22 27.91 27.33 17.07 23.32
11.06 10.25 7.88 8.83 8.84 10.51 24.76 10.27 7.99 9.77 21.35 14.15 2.06 1.98 2.38 3.89
59.94 7.24 36.86 45.83 47.63 31.66 111.91 63.95 0.34 0.35 147.51 133.68 14.39 13.47 8.32 14.38
16.55 1.89 7.96 7.59 8.83 6.73 21.16 11.81 4.79 5.86 22.72 24.4 20.34 10.67 11.02 23.81
9.07 5.72 4.21 2.26 5.82 7.21 13.63 6.04 4.11 7.79 13.92 12.58 18.88 18.91 15.27 13.27
14.61 5.11 10.39 7.34 10.45 9.98 18.86 8.95 6.16 7.76 21.24 17.35 36.51 29.55 32.09 25.0
10.92 6.82 5.48 10.15 14.96 20.86 32.52 9.97 6.23 5.02 24.28 19.72 11.86 7.59 3.47 13.97
543.82 347.92 359.78 334.06 369.95 389.38 621.17 166.84 89.52 107.18 814.38 821.68 264.27 208.15 130.94 328.48
14.42 6.39 6.23 9.11 11.26 12.94 26.81 12.55 14.06 14.2 21.89 19.5 5.81 6.52 7.47 9.41
582.17 294.47 518.28 357.79 982.36 901.39 1213.6 1061.95 466.03 1032.08 1238.65 2095.46 306.87 374.72 518.17 373.4
13.73 20.76 8.9 7.58 8.3 14.13 127.15 77.23 18.53 17.84 150.23 96.14 79.5 70.53 45.46 97.71
38.39 26.03 27.83 23.92 33.96 35.9 73.58 43.16 14.92 12.53 95.11 62.31 134.77 119.61 98.48 104.19
401.01 244.7 212.5 179.6 297.66 292.95 443.72 295.37 89.04 154.1 528.58 598.47 677.36 614.77 433.17 761.99

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)