Heatmap: Cluster_365 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-6.71 - - - - - -4.28 3.99 - - - - - - - -
- - - - - - -4.27 4.0 - - - - - - - -
- - - - - - -4.4 3.96 - - - - - - -1.43 -
- - - - - - -4.82 4.0 - - - - - - - -
- - - - - - -4.93 4.0 - - - - - - - -
- - - -8.05 -9.25 - -5.53 3.99 -7.23 -6.43 -8.72 -6.24 - -8.56 - -6.59
-11.01 - - - - - -5.37 3.83 -6.51 -8.15 -11.11 - -5.41 0.71 -3.28 -5.83
-7.47 -10.41 - - - - -5.3 4.0 - -7.56 - - - - -6.91 -
- - - - - - -4.76 4.0 -6.47 - - - - -7.24 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.