1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_283 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.22 -5.66 -4.27 -2.86 - -1.64 -2.03 -1.56 - - -2.12 -3.83 2.23 1.82 0.27 2.11
0.54 -1.38 -1.2 -1.77 -1.17 -0.32 -1.43 -0.59 -8.89 -6.83 -6.79 -3.9 1.62 1.53 1.17 1.51
3.14 -0.2 -2.22 -0.89 -1.09 -1.25 - -1.07 -0.64 - 1.04 -1.65 -0.31 -1.4 - -
-0.11 -6.1 -3.2 -3.27 -1.57 -3.95 -2.79 -2.48 -7.74 -8.26 -3.85 -2.33 1.75 1.4 1.92 2.02
0.85 -1.75 -0.52 -1.88 0.06 0.11 -0.76 0.32 -2.63 - -2.21 -2.64 0.69 0.4 1.25 1.65
2.76 -6.04 0.23 -0.43 1.4 -0.64 0.68 -4.44 -4.31 -7.25 -2.69 -3.23 -0.97 -0.49 -1.75 -0.88
0.54 -6.56 -1.25 -2.5 -0.97 -0.8 -1.95 -0.92 - - -3.58 -2.53 1.87 1.69 0.63 1.75
2.46 - -2.31 -1.39 -0.6 0.9 0.34 -0.11 - - -2.64 -1.16 1.6 -2.5 - 0.48
1.89 -1.84 -0.06 -0.46 0.36 0.43 -0.1 -1.09 -2.64 -4.43 -1.26 -1.69 -0.03 0.09 0.91 0.51
-1.1 -3.74 -3.1 -2.89 -1.26 -1.86 -3.27 -1.82 - - -6.03 -3.81 1.79 2.26 -0.62 2.37
0.78 -1.64 -0.48 -0.73 -0.66 0.15 0.01 -0.41 -1.23 -1.62 -0.61 -0.79 0.99 0.59 0.54 1.15
2.56 - -2.32 -1.99 1.13 -0.19 -1.99 -4.97 - - - - 0.91 2.14 - -
2.5 -3.54 -0.06 0.23 1.7 0.38 0.4 -2.64 -5.56 -6.5 -0.88 0.5 -5.24 -5.33 -5.26 -5.36
1.34 - -1.09 -1.97 -1.79 -0.39 - - - - - - 1.46 0.99 0.56 2.46
2.73 -5.53 0.57 1.11 0.63 -0.73 0.12 -1.12 - -4.15 -0.79 -0.56 -2.92 -3.61 -1.53 -2.63
0.97 -1.93 -1.42 -1.78 -0.52 -0.58 -0.99 -0.67 -6.11 -5.79 -0.84 -0.29 1.08 0.95 1.1 1.59
2.5 - -1.19 - -0.1 -1.18 - - - - - - 0.69 1.18 1.67 0.57
4.0 - - - - - - - - - - - - - - -
1.76 -2.75 -0.2 -1.28 -0.75 -0.91 -3.87 -2.04 - -2.56 -2.53 - -0.29 1.2 1.98 1.24
0.97 - -2.32 -1.39 -2.21 -0.75 - -3.71 - - - -1.71 1.9 1.48 2.13 0.45
-1.99 - -4.47 -4.14 -3.78 -3.74 -3.94 -3.38 - - - -3.64 2.0 2.38 1.24 1.88
2.97 -0.85 0.32 - 1.41 0.51 - -2.87 - - -1.38 0.8 - - - -
1.76 0.14 0.16 -0.19 0.41 0.63 -0.12 -1.28 -0.5 -0.1 -0.13 -1.44 -0.42 -2.19 -1.44 0.04
2.58 -3.33 -0.5 0.26 1.58 -1.7 -0.54 -0.77 -0.48 - - -0.08 - -0.54 - 0.11
-0.54 - - - - - - -4.15 - - - - 2.15 1.32 1.39 2.51
0.3 - - - -3.12 -1.53 -2.07 -0.8 - - - - 1.72 1.3 0.79 2.59
1.59 -1.21 -0.64 -0.09 -0.59 0.37 -2.57 -2.35 -0.75 -0.4 -1.76 -1.9 0.35 0.44 1.53 0.28
-0.54 -3.27 -2.78 -3.53 -2.49 -1.88 -3.84 -1.33 - -6.23 -6.78 -5.56 2.02 1.93 1.36 1.84
0.84 -0.97 -0.52 -1.31 -0.07 -0.48 -1.75 -0.54 -0.9 -3.09 -1.35 -1.25 0.99 1.41 1.41 0.23
1.4 0.27 -0.13 0.4 0.19 0.51 -0.19 -0.54 -0.93 -0.18 -0.82 -1.27 -0.15 -0.53 -0.49 0.12
2.74 - 0.03 -0.19 0.36 1.24 1.16 -1.79 - - - 0.24 - -3.62 - -
1.59 -2.08 -0.42 -0.12 -0.21 0.93 0.18 0.03 -1.68 -1.5 -0.42 -0.65 0.19 -0.13 -0.15 0.21
2.92 1.01 -1.06 -1.73 - 1.71 -1.15 -1.71 -1.5 - - -1.51 -0.15 - - -
3.38 -2.05 -3.82 -0.68 1.27 0.24 -0.4 - - - -3.15 -2.25 - - - -
2.53 -1.85 -0.36 0.29 1.78 -0.59 - - - - 0.75 1.1 - - - -
0.83 -1.87 -0.54 -0.86 -0.44 -0.22 -0.56 -0.28 -0.92 -1.24 -0.14 -0.7 0.85 0.59 0.86 1.0
1.12 -0.59 -0.07 -0.45 -0.05 0.21 -0.02 -0.9 -0.99 -0.61 -0.61 -0.7 0.4 0.41 0.44 0.47
1.2 -1.01 -1.4 -0.92 -1.21 0.17 -1.5 0.09 -3.22 -2.92 -0.99 -1.46 0.79 1.32 1.08 0.9
3.3 - 0.97 1.31 - -1.06 0.29 - - - - - - - - -
3.49 0.36 - - 0.65 0.9 - - - - - - - - - -
2.9 -1.45 -1.67 -0.31 1.03 2.33 - - - - - - - - - -
0.02 - - -4.61 -3.81 -1.39 - - - - - - 2.1 1.74 1.65 1.9
0.9 -1.16 -1.16 -3.0 -1.2 -0.28 -1.36 -1.79 -1.96 -1.7 -1.67 -0.97 1.23 1.13 1.47 1.32
-6.85 -9.9 - -10.63 -8.64 -9.41 -10.86 -11.93 - - - - 2.03 2.15 2.07 1.71
-1.58 - - - - - - -4.8 - - - - 2.18 2.57 0.84 1.74
1.92 -1.58 -0.69 -1.08 0.2 0.12 0.15 -2.49 -6.19 -6.13 -1.45 -1.25 -0.01 0.15 1.81 -0.23
-3.62 - -9.2 -8.87 -6.07 -6.91 - -5.49 - -6.99 -7.54 - 2.08 3.36 -0.75 -0.34
3.54 - - - - - - - 2.12 - - - - - - -
1.45 -2.45 -0.38 -1.14 -0.06 0.33 -0.22 -0.75 -2.19 -3.26 -0.16 -0.34 0.87 0.37 0.34 0.85
0.83 -0.44 -0.26 0.03 -0.11 0.32 -0.16 -0.65 -1.04 -0.31 -0.38 -0.66 0.49 0.52 0.51 -0.05
2.67 - - -2.96 -0.15 0.76 -2.96 1.56 - - -1.63 -2.74 0.21 0.12 -0.4 -1.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.