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Heatmap: Cluster_312 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-2.68 -4.06 -0.43 -0.57 0.28 -0.09 -0.33 -1.57 - - -1.7 -1.16 1.47 1.44 1.41 1.13
-3.8 -2.0 1.93 0.96 2.13 1.67 -0.48 -1.56 -1.96 -2.54 -2.03 -1.45 -4.79 -4.52 -5.9 -2.67
-6.71 - 1.68 1.58 2.26 1.54 0.45 -1.82 - - -2.68 -1.82 - -7.12 - -
- -1.44 0.73 0.22 1.77 0.99 0.47 -2.78 - - - - 0.47 0.96 - 1.35
-2.24 -1.6 1.23 0.87 1.61 0.86 1.32 -0.55 -4.1 -1.55 -1.44 -0.43 -0.29 -1.08 -4.1 -1.34
-1.79 - 0.42 0.91 1.57 -0.11 0.47 -0.45 -6.92 -3.27 -0.57 -0.91 0.57 -0.21 -0.26 1.0
-3.32 -6.66 0.91 0.7 2.18 1.78 1.45 -4.1 -1.9 -2.48 -0.96 -1.55 -3.62 -4.3 -4.23 -2.74
-7.96 -0.62 1.79 1.24 2.48 1.3 -0.89 -1.94 -4.67 -4.36 -3.11 -1.56 -5.96 -8.2 -3.59 -7.22
- - 1.84 0.98 2.06 1.49 1.73 -7.37 - - -5.04 -3.14 - - - -
-4.28 - 1.17 1.84 2.57 1.43 -0.09 -4.26 -1.85 - - -3.44 - -3.22 - -
-4.67 - 1.25 1.22 2.1 1.2 0.74 -4.53 -3.89 -2.96 0.08 0.67 -4.14 - -4.16 -
-4.93 -6.55 1.38 1.68 2.31 0.92 0.97 -0.97 -4.75 -5.61 -2.79 -0.69 - - - -
-3.89 -3.92 0.65 1.08 1.75 0.57 -1.73 -1.94 -5.45 -4.39 1.01 1.22 -2.77 -3.37 1.02 -3.41
-0.66 -0.54 0.98 1.01 1.14 0.91 0.95 -1.51 -1.44 -0.86 -0.27 -0.14 -1.11 -1.47 -1.76 -0.84
- - 0.94 0.37 1.99 1.35 1.49 -0.24 - - -0.09 0.71 - -4.4 - -
-4.9 - 1.5 0.99 2.6 1.61 0.77 - - - -4.43 - - - -2.22 -3.31
-10.39 - 1.62 1.49 2.36 0.63 -0.2 -3.5 -3.79 -5.55 -0.45 0.64 -9.62 - -3.64 -8.74
-3.37 -2.86 1.28 0.95 1.33 0.38 0.84 0.99 -1.4 -3.85 0.23 0.22 -1.55 -2.09 -3.58 -1.47
-4.42 - 1.13 1.64 1.69 1.81 0.71 -0.97 -2.94 -1.92 -0.79 -1.25 -2.75 -3.69 -3.08 -4.55
- -6.98 -2.61 -2.92 -1.06 -2.13 -1.51 -6.08 -2.52 -2.98 -2.43 -3.27 1.78 1.18 0.79 2.73
-8.09 -5.67 1.21 1.62 2.26 0.76 1.06 -5.52 -6.78 -6.13 0.19 -0.22 - - - -
-5.35 -6.69 2.02 1.09 2.2 1.2 -0.96 -2.5 -3.87 -2.95 -0.6 -0.85 -6.53 -4.04 -0.97 -2.33
- - 1.29 1.88 2.32 1.86 -0.85 - - - -2.36 -1.22 - -6.68 -3.61 -
-2.22 -1.36 0.97 1.14 1.73 1.68 1.39 -0.94 -2.38 -2.87 -2.43 -0.4 -4.1 -3.97 -2.9 -4.48
-5.49 - 1.54 1.2 2.22 1.5 0.07 -4.12 -3.99 -4.35 -0.73 0.02 - -3.21 -1.72 -4.82
-7.93 -9.26 1.0 1.09 2.31 1.07 -1.44 -4.03 -4.86 -2.17 1.2 0.83 -8.83 -7.6 -6.27 -8.95
-9.24 - 1.93 1.44 2.52 1.15 0.54 -4.35 - - -6.71 -4.65 - - - -
-2.49 -1.67 0.94 0.84 1.45 0.47 0.6 0.32 -1.66 -1.62 0.1 0.15 -1.02 -1.23 -1.13 -0.51
-1.25 -7.58 1.69 1.39 2.05 1.21 -2.31 -4.71 -2.25 -4.86 -1.01 -0.04 -1.98 -1.44 -2.18 -1.1
-4.22 - 1.59 0.89 2.22 1.65 1.25 -6.09 -1.87 - - -2.88 - -2.62 - -1.65
-0.38 -3.36 0.43 0.12 1.02 0.43 0.79 -0.91 -1.95 -2.4 -0.69 -1.32 0.78 0.31 -0.52 0.95
- -5.85 1.65 1.01 1.77 1.34 1.56 -5.61 -1.88 -0.96 -1.09 -0.64 - - - -
-0.96 -1.05 0.8 0.45 1.58 0.29 0.21 -1.82 -1.84 -1.39 0.05 0.55 -0.39 -0.48 -0.99 0.13
-3.54 - 1.35 1.46 2.51 1.26 0.91 -4.13 - - -2.81 -2.92 - -3.25 -2.18 -
-1.55 -4.82 0.99 1.34 2.07 1.29 0.64 -0.61 -6.93 -5.73 -2.16 -0.65 -1.35 -2.12 -1.88 -1.08
-6.28 - 1.57 1.53 1.54 1.43 -1.27 -1.48 -3.51 -3.63 1.01 -0.18 -1.97 -3.03 -4.82 -1.9
- -3.12 1.47 1.05 1.99 1.99 1.2 -3.69 - - - -3.87 - - -0.58 -
-4.06 -3.3 1.91 1.23 2.42 1.36 -2.97 -3.52 -5.64 -6.46 -2.75 -2.16 -1.58 -2.33 -1.42 -1.94
-6.76 -1.45 0.86 1.47 1.28 1.36 1.4 -1.63 -2.54 -0.79 0.09 0.22 -5.97 -6.75 -4.68 -6.1
-2.72 - 1.11 1.35 1.96 1.29 1.3 -5.21 -3.96 -3.9 -0.49 -1.38 -1.9 -2.51 -1.25 -2.02
- - 1.47 1.48 2.68 0.96 0.95 -5.48 - - -5.41 -3.52 - - - -
-6.04 -0.54 1.41 1.14 2.14 0.94 -0.83 -1.4 -2.46 -2.78 0.42 0.55 - - - -4.39
- -4.73 0.36 0.86 2.13 0.76 1.78 -2.66 -0.84 0.07 -0.16 -0.51 - - - -
-1.22 -2.32 1.66 1.02 1.85 1.78 -3.56 -2.54 -0.14 0.28 -1.33 -2.01 -5.98 -5.45 - -3.4
-5.09 -2.65 1.16 1.28 1.9 1.23 1.32 -0.75 -1.91 -1.49 -0.93 -0.98 -5.21 -3.72 -3.23 -3.01
-1.52 -1.97 0.82 0.45 1.3 0.78 1.14 -1.27 -2.68 -2.67 -0.17 -0.48 -0.23 -0.08 -0.0 -0.39
-1.2 -1.05 0.99 0.79 1.45 0.17 0.16 -1.1 -0.51 -0.57 -0.08 0.02 -0.3 -0.81 -1.16 -0.38
- - 1.48 1.78 2.08 0.93 -1.98 -7.65 - -5.53 -0.14 1.06 -3.32 -3.47 -5.1 -2.71
-4.31 -4.95 0.6 0.94 1.95 1.11 1.16 -2.26 -1.29 -0.34 -0.06 -0.69 -1.45 -1.75 -2.8 -1.21
-6.92 - 1.1 1.83 1.91 1.64 1.04 -5.5 - - -1.47 -0.03 - - - -
- - 1.99 1.63 2.34 1.95 - - - - - - - - - -
-2.77 -0.95 1.05 1.85 1.5 2.03 1.06 -1.85 -5.32 -4.31 -3.43 -4.56 -4.48 -4.52 -6.09 -3.38
-6.52 - 1.41 1.02 2.18 1.41 0.69 -3.32 -4.21 -5.15 -1.31 0.78 - -2.42 - -
-0.6 -1.62 0.22 0.4 1.26 -0.36 -0.28 -0.29 -4.03 -2.85 0.1 0.31 0.43 0.31 -0.18 0.79
- - 1.28 1.19 2.19 1.2 1.85 -1.5 - - -4.07 - - - -1.86 -2.96
-0.65 -4.28 0.94 1.38 2.11 1.3 0.95 -2.65 -5.4 -5.66 -1.04 0.23 -4.78 -6.46 -3.07 -4.17
-3.79 -6.36 1.45 1.67 1.47 1.35 1.22 -1.5 -5.14 -5.08 -1.4 -0.21 -3.83 -3.12 -1.27 -3.37
- - 1.5 1.17 1.93 1.53 1.33 -5.45 - - -0.52 -0.05 - - - -
-3.83 -6.49 1.42 1.87 1.85 0.84 1.35 -2.09 -4.25 -5.13 -0.57 -0.97 -6.53 -5.04 -4.24 -3.75
-5.4 -3.84 -0.9 -0.4 0.36 -1.33 -0.76 -3.41 - - -1.86 -2.16 2.34 1.95 -1.08 1.24
-4.86 -10.2 1.36 0.99 2.03 0.57 0.46 -0.86 -4.41 -4.59 -3.84 -1.98 0.06 -0.32 -1.23 0.3
- -0.84 1.6 0.52 2.6 1.65 -0.72 -4.06 -4.28 - -1.02 -0.83 - - - -
-3.45 -6.9 1.26 1.57 2.07 1.37 1.15 -2.45 -3.02 -2.0 -0.62 -1.64 - -8.74 - -
-0.28 -1.2 0.91 0.62 1.37 0.93 -0.82 -1.87 -1.83 -2.67 0.11 0.5 -0.42 -0.27 -1.03 -0.02
-6.01 -4.76 0.98 1.44 2.19 0.5 0.82 -1.56 -1.53 -0.82 0.57 -0.44 - -8.0 -4.93 -7.03
-1.11 -0.84 0.81 1.4 1.53 0.94 1.27 -1.92 -0.58 -0.97 -0.51 -0.84 -2.12 -2.55 -3.03 -2.95
-4.14 -5.33 1.12 1.19 2.02 1.05 0.82 -3.99 -3.5 -3.65 -0.26 0.02 -1.69 -1.29 -1.04 -1.7
- - 1.44 2.33 1.77 1.29 0.08 - - - -0.72 -0.4 - - - -
- - 0.55 1.32 2.07 1.45 1.66 -4.12 -4.25 -4.99 0.15 -0.56 - - - -
- - 1.49 1.84 1.63 2.3 0.29 -6.87 - - -3.0 -2.75 - -7.0 -3.92 -6.02
- -4.68 1.48 1.67 2.01 1.71 0.62 -4.17 - - -4.82 -2.92 -1.1 -1.41 - -3.1
-1.72 0.57 1.22 0.55 1.6 0.82 -0.49 -1.42 -2.62 -3.14 0.46 0.14 -1.27 -1.18 -0.7 -1.7
-3.85 -3.05 1.17 0.89 1.38 0.97 1.56 -0.88 -3.62 -4.02 -0.8 -0.7 0.04 -0.49 -2.18 -1.47
-1.36 -0.08 0.91 0.63 1.09 0.68 -0.27 -1.37 -1.52 -2.04 0.14 0.31 -0.27 -0.39 -0.41 0.02
-4.59 0.22 1.53 1.15 1.9 0.7 0.99 -3.51 - -7.45 -1.63 -1.56 -1.01 -1.55 -2.03 -0.98
- - 1.58 0.29 1.5 1.34 0.41 -5.29 - - - -5.0 -0.11 -0.64 0.8 0.8
- - 1.3 1.49 1.85 1.85 1.15 -7.6 -3.97 - -2.29 0.04 - - - -
-9.24 - 1.81 1.48 2.48 1.31 0.52 -5.79 -7.83 -2.95 -6.74 -4.26 - - -5.53 -
-2.08 - 0.91 1.47 1.37 1.72 0.3 -2.3 - - - - -1.05 -0.66 1.09 -0.91
-0.9 -5.68 0.62 0.35 1.46 0.41 0.85 -3.05 - -5.23 -3.27 -3.72 1.05 0.23 -0.43 1.29
-7.91 -8.67 1.77 0.84 2.0 1.35 -0.46 -7.05 - - 0.18 0.93 - -7.27 -1.2 -6.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.