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Heatmap: Cluster_9 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
439.87 214.51 456.07 322.08 394.75 407.58 350.15 250.97 82.62 62.6 131.6 166.93 485.18 573.26 718.32 559.26
56.11 8.8 30.71 29.3 28.84 32.5 33.45 15.52 0.77 2.17 7.7 16.42 85.06 87.15 74.65 64.97
468.16 360.75 523.07 317.26 510.13 529.33 414.22 242.25 134.92 101.06 232.03 292.13 709.98 811.17 1058.43 685.61
999.66 569.3 728.92 470.47 674.37 742.71 622.34 405.89 275.02 212.24 410.65 472.96 1005.84 963.18 1378.04 800.08
1455.0 726.73 1116.78 655.53 955.45 1201.93 1083.04 705.89 331.53 242.84 633.64 750.5 1381.21 1800.39 2038.2 1115.96
17.52 0.09 10.75 6.1 10.71 10.63 7.51 10.24 0.02 0.02 1.18 2.33 38.81 26.41 21.2 46.21
57.99 0.37 23.19 11.92 26.37 28.32 9.04 14.63 0.0 0.11 0.23 2.5 349.47 364.36 303.69 306.82
6.38 2.17 6.05 5.53 6.09 9.43 3.78 3.47 1.34 1.32 3.03 2.17 10.62 8.51 9.25 8.85
1.23 3.82 7.85 2.63 9.02 5.06 4.37 2.85 0.0 0.0 0.11 1.27 33.94 43.32 23.52 32.59
7.48 7.62 8.95 10.69 15.0 10.42 14.87 8.09 0.0 0.0 0.0 0.0 12.0 4.46 5.24 10.84
16.69 0.47 23.88 13.9 19.0 18.22 33.17 16.24 0.0 0.13 6.89 12.91 124.93 134.94 146.0 81.3
53.42 0.08 33.83 13.68 18.7 19.08 15.47 25.13 0.22 0.08 3.96 7.64 69.33 57.13 51.47 67.06
20.29 0.51 14.56 12.2 15.84 12.3 8.38 7.66 0.1 0.16 6.0 9.01 35.11 32.74 41.56 31.64
975.26 272.69 878.91 626.92 780.26 837.61 647.51 204.23 226.68 175.9 422.29 706.51 684.99 864.79 1370.52 792.2
15.01 1.01 7.31 4.13 7.87 7.29 7.23 6.86 0.14 0.2 3.66 2.81 30.28 21.82 21.03 23.33
89.94 35.43 101.46 98.7 111.23 69.86 65.9 40.06 56.64 56.55 58.28 85.53 64.89 52.19 55.21 71.12
106.09 18.47 82.55 79.72 97.0 95.16 83.14 45.96 8.07 6.42 22.56 40.95 43.2 30.02 24.7 51.48
0.25 0.74 1.15 0.34 2.18 1.08 0.75 0.7 0.07 0.0 0.0 0.07 4.16 4.52 3.6 3.67
54.97 65.17 61.62 51.55 101.83 80.19 112.65 68.39 11.38 19.02 37.57 47.73 123.88 115.77 112.21 92.69
115.73 85.05 165.73 90.18 135.49 145.6 125.72 74.42 50.5 29.32 79.93 99.52 216.71 273.6 282.47 170.32
9.56 4.4 9.8 6.18 7.93 8.69 7.39 4.2 2.37 2.22 4.02 5.73 8.32 5.21 3.88 6.49
0.46 1.17 1.01 0.49 2.28 1.13 1.52 1.5 0.29 0.07 0.31 0.35 0.27 0.09 0.36 0.08
106.5 64.57 97.22 86.57 77.39 99.02 126.83 73.51 46.73 59.15 68.82 71.89 152.18 152.78 175.15 190.49
11.46 4.8 16.15 16.37 14.06 18.38 12.04 7.75 1.03 0.56 2.24 6.24 15.13 15.52 13.95 14.37
964.08 745.91 990.95 536.42 817.93 1033.29 989.82 549.66 190.54 120.41 312.04 404.05 2221.77 2794.31 3362.51 1799.46
538.33 365.52 453.76 252.81 365.59 387.45 499.11 271.06 125.45 115.65 241.71 376.5 562.05 732.69 961.13 526.31
328.77 140.53 293.31 112.84 235.43 208.61 327.28 146.38 31.62 27.3 93.07 163.67 284.28 408.15 494.85 292.56
17.29 2.68 14.04 7.42 14.46 12.21 14.01 7.6 0.86 0.82 2.45 8.03 27.14 16.23 29.32 24.08
8.92 1.22 4.93 3.2 4.53 5.48 3.5 3.53 0.73 0.24 1.4 1.72 18.31 11.72 8.73 15.62
62.38 6.31 38.82 20.08 33.78 25.87 34.13 29.88 4.41 2.73 7.51 12.12 64.72 62.98 77.54 90.45
24.71 0.0 17.33 7.21 13.14 11.84 7.4 15.26 0.0 0.0 2.13 5.32 35.91 29.71 23.68 37.35
914.37 515.42 875.51 502.49 749.87 858.29 416.31 288.59 92.21 56.93 158.81 222.92 1336.43 1700.18 2052.68 1083.41
19.48 1.58 9.2 6.07 9.49 11.2 4.47 5.73 0.45 0.5 2.08 4.0 22.76 13.06 13.82 17.25
1223.3 639.0 799.66 662.72 686.31 803.07 948.35 437.06 203.79 168.04 374.01 489.16 775.83 822.08 902.0 616.55
6.25 0.24 3.1 3.24 3.41 2.51 2.75 3.23 0.15 0.57 0.24 0.77 0.47 0.75 3.15 1.3
6.03 0.17 3.1 1.78 2.61 2.56 2.17 3.84 0.04 0.0 0.24 0.62 1.31 0.04 0.18 0.94
0.34 0.0 6.11 6.95 14.83 12.96 4.87 0.63 0.63 0.25 3.27 1.16 0.25 1.04 7.74 0.79
1.96 0.57 1.48 1.27 1.53 1.73 0.28 0.28 0.09 0.23 0.42 0.39 2.46 2.66 2.19 2.77
1189.18 27.26 996.46 783.44 896.31 774.35 616.29 309.22 3.08 1.69 55.24 210.1 827.47 909.06 1267.88 950.46
19.56 0.98 9.37 6.36 9.97 12.11 6.12 6.81 1.2 0.62 2.44 3.28 24.23 14.45 11.21 22.9
365.41 253.45 448.77 254.56 367.32 320.82 311.09 163.75 53.03 32.93 131.97 240.86 381.27 406.53 561.95 389.01
6.63 2.64 9.21 4.71 8.17 6.06 10.1 6.49 0.04 0.04 2.69 4.62 38.76 35.9 36.83 27.79
38.96 45.69 68.72 33.55 60.08 62.24 75.7 47.82 9.31 5.11 20.49 23.63 139.76 188.06 220.99 74.37
7.43 1.25 2.6 8.13 8.76 5.82 10.24 0.45 1.33 1.25 6.11 3.5 0.85 0.44 0.41 0.48
18.14 4.53 15.11 16.36 21.65 21.56 12.66 11.77 3.1 2.51 9.47 6.45 31.77 18.05 9.25 28.47
875.45 437.01 719.02 439.71 577.69 700.14 565.45 337.35 226.28 182.33 305.41 388.67 740.97 910.88 1205.6 675.75
191.47 89.37 183.98 152.8 149.87 167.5 159.09 100.6 42.66 28.42 73.88 96.41 204.6 237.85 326.29 212.44
0.09 0.29 0.61 0.7 0.56 0.72 0.65 0.55 0.05 0.0 0.05 0.04 0.0 0.05 0.0 0.0
55.73 7.75 46.63 19.3 47.67 56.03 15.95 19.55 0.39 0.29 1.4 4.36 287.22 263.38 253.7 286.06
3.35 2.23 2.53 3.7 2.09 3.34 4.96 2.9 1.72 0.72 2.04 2.05 10.51 6.78 6.5 8.88
4.03 1.21 0.9 4.64 8.5 6.11 6.15 4.31 0.0 0.0 3.57 2.07 5.44 7.4 5.09 8.8
24.68 0.43 13.33 10.99 11.68 9.5 10.59 10.91 0.3 0.12 2.61 5.83 62.37 40.18 28.46 52.53
173.33 7.84 128.71 60.68 113.76 104.88 52.3 72.71 0.0 0.27 4.8 15.59 553.81 464.98 534.08 450.3
34.01 17.5 32.74 18.74 25.14 28.81 7.59 7.94 2.94 11.31 2.2 2.83 10.52 5.57 1.56 14.02
11.04 0.0 10.86 4.67 10.31 6.76 20.15 6.17 0.0 0.0 1.68 5.39 0.26 0.45 0.51 1.76
2.66 0.0 1.66 1.4 3.96 3.89 0.99 0.16 0.0 0.0 0.64 0.24 5.04 9.16 15.15 10.34
282.24 155.03 164.61 118.7 152.48 179.13 168.9 98.41 56.87 44.51 73.05 99.97 222.56 262.85 302.93 238.78
1.85 2.07 1.94 2.73 4.36 2.59 4.24 3.37 0.89 0.51 0.78 0.72 7.3 5.69 5.58 3.54
38.78 5.96 21.16 14.0 21.53 15.55 18.42 21.41 0.09 0.24 4.53 12.58 5.19 2.21 1.39 13.11
27.41 0.46 15.09 8.22 15.24 14.91 8.45 16.33 0.05 0.0 1.37 5.14 59.2 45.3 39.14 47.96
11.54 7.75 10.57 16.11 14.67 11.17 17.06 5.92 8.05 6.97 11.46 7.8 32.38 22.14 18.95 28.92
0.02 0.0 0.03 0.0 0.04 0.03 0.28 0.01 0.0 0.0 0.0 0.0 0.12 0.11 0.0 0.0
2.09 1.64 2.26 2.35 4.14 3.88 2.27 1.42 1.48 1.88 1.96 1.44 3.03 1.61 1.93 2.86
413.77 174.19 293.21 205.37 252.68 267.7 257.89 154.63 66.89 43.37 113.02 148.6 626.48 770.67 844.77 499.81
706.56 247.96 567.32 361.04 438.34 535.85 535.23 288.77 139.0 108.34 266.24 352.75 680.59 809.69 1062.99 644.22
494.63 253.88 408.09 248.62 373.97 371.36 428.68 201.18 86.62 92.6 164.81 238.61 473.01 534.59 756.26 538.62
778.07 345.28 580.83 334.23 571.44 580.82 359.51 238.28 115.13 78.06 224.66 275.58 1154.72 1433.9 1712.81 1021.82
699.78 296.83 372.88 264.42 440.24 500.17 365.84 210.95 101.44 49.18 176.99 221.49 417.38 495.08 672.82 239.67
14.49 0.0 6.04 5.9 12.11 2.58 27.33 0.19 0.0 0.0 0.13 7.27 0.61 0.29 0.0 0.0
6.75 0.0 4.94 2.46 7.68 2.71 4.08 0.1 0.0 0.0 0.48 0.26 0.16 0.0 0.0 0.15
492.28 282.62 445.33 301.51 420.46 453.6 347.81 208.69 140.01 121.32 244.88 297.09 400.23 446.26 619.24 447.41
5.07 1.85 6.3 3.62 17.66 16.15 4.81 3.08 1.12 0.58 1.83 1.68 30.69 47.87 17.24 16.1
1.22 0.0 0.45 1.41 0.63 0.79 2.64 0.01 0.0 0.0 0.07 0.13 0.17 0.0 0.0 0.0
12.83 0.0 3.68 9.44 7.56 7.34 19.36 0.1 0.0 0.0 0.27 2.46 0.0 0.0 0.0 0.0
0.91 0.38 0.89 0.32 0.96 0.5 0.0 0.0 0.0 0.2 0.0 0.0 0.47 0.22 0.0 0.43
56.48 0.84 29.09 17.59 26.85 27.98 19.35 28.79 0.02 0.0 4.0 5.85 82.82 54.45 44.9 82.43
1262.05 479.01 836.67 522.06 744.92 978.42 824.79 547.0 354.62 220.19 552.67 641.64 1009.97 1211.92 1675.83 1180.29
2.66 3.07 4.58 5.53 5.68 4.42 5.87 4.44 2.09 1.21 2.52 2.99 39.77 42.52 21.6 30.18
21.49 14.69 18.92 16.16 20.72 7.98 4.49 5.95 2.44 2.47 1.04 1.11 74.1 78.93 45.8 60.14
3.41 0.79 3.64 1.9 4.14 2.08 1.65 1.94 0.0 0.0 0.06 0.0 8.31 8.6 1.43 5.49
41.89 13.15 52.01 58.6 49.97 39.53 90.45 24.32 29.82 8.3 38.65 32.48 39.32 36.68 30.32 50.36
490.53 347.46 586.78 438.15 464.82 652.27 544.0 344.38 153.64 111.01 271.45 369.16 1073.89 1567.41 1795.1 926.88
3.82 2.58 6.67 4.83 7.27 3.36 7.82 4.81 1.57 0.57 1.53 2.84 5.12 4.3 2.39 5.89
1222.99 560.22 1004.57 672.15 1049.44 1131.45 767.33 483.1 253.54 138.81 286.81 333.67 1405.51 1231.95 1708.3 892.4
5.11 2.1 2.07 2.73 9.06 0.0 17.27 3.72 0.0 0.0 0.0 0.0 35.22 41.19 0.0 145.47
501.26 293.23 563.82 280.25 426.4 521.27 576.84 339.93 156.68 116.54 332.04 414.3 537.05 602.02 924.26 456.25
22.87 0.32 30.29 18.09 36.89 6.98 4.03 3.04 0.05 0.16 1.29 2.64 30.48 6.36 13.73 45.7
911.76 549.19 687.99 403.86 624.09 658.92 648.5 471.82 215.88 182.02 469.69 574.81 999.64 1084.5 1614.95 886.12
0.25 1.29 1.22 0.0 4.81 1.86 1.06 0.85 0.0 0.0 0.0 0.45 0.0 0.0 0.0 0.0
1.42 1.14 2.11 2.12 3.89 1.99 4.24 2.06 0.47 0.29 1.21 1.13 10.12 6.22 6.12 8.83
27.5 29.88 33.75 44.65 47.75 28.95 40.63 16.79 29.7 26.71 36.32 31.96 30.88 29.29 18.16 32.47
42.39 12.82 66.52 71.06 80.07 11.27 3.61 18.0 7.43 5.81 12.55 10.41 37.75 31.5 18.71 31.16
83.61 4.78 54.26 32.73 49.06 50.88 40.84 34.44 2.22 2.95 8.48 32.32 100.92 87.75 68.57 109.44
731.73 156.09 629.82 333.46 539.29 693.6 179.49 190.35 16.89 13.28 28.16 48.97 2330.48 2720.96 2626.81 2226.62
0.0 0.0 0.06 0.0 0.4 0.24 0.04 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
674.65 403.21 554.77 356.2 448.04 634.06 401.43 315.41 123.73 78.55 190.99 255.28 1150.48 1702.22 1684.48 970.3
29.79 13.24 23.92 21.68 30.74 22.06 21.69 11.72 0.62 0.09 9.31 15.3 59.64 51.11 57.08 67.67
21.5 0.77 12.36 8.38 11.67 11.06 6.75 11.08 0.0 0.02 2.76 6.03 46.7 32.06 29.54 46.04
45.66 7.28 34.17 28.79 44.47 37.08 9.79 18.8 7.92 6.85 6.27 8.26 135.09 122.09 133.51 96.88
3.17 0.44 1.59 0.29 2.29 0.91 0.44 0.8 0.0 0.0 0.07 0.35 7.02 6.4 6.21 3.54
259.38 171.71 195.53 125.23 200.14 178.48 165.12 108.44 29.66 22.69 49.58 65.12 285.32 320.39 428.59 217.94
9.28 6.45 6.03 9.15 5.72 7.88 13.27 6.46 4.0 3.39 5.76 3.78 5.97 12.54 13.05 16.22

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)