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Heatmap: Cluster_217 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.27 -1.98 0.47 0.01 0.21 0.91 0.99 0.57 -3.21 -1.83 -0.12 -0.64 -0.54 -1.64 0.11 1.26
- - 0.65 0.18 1.22 1.41 1.28 1.53 -3.85 - 0.2 0.75 - -3.63 - -
-5.84 -7.78 1.11 0.96 1.37 1.79 1.11 1.01 - - -0.84 -0.05 -6.25 -5.76 -4.28 -6.37
-1.46 -3.08 -0.58 -0.22 -0.42 -0.6 -1.1 -0.36 -4.04 -3.81 -2.55 -1.77 1.68 1.6 1.39 0.91
-4.54 -5.68 0.96 0.64 1.13 1.28 1.03 1.43 -5.24 -6.77 -2.21 -0.43 0.14 -3.43 - -0.17
-4.21 - 1.19 -0.03 1.07 1.1 0.85 1.55 -2.27 -4.53 -1.25 -0.14 -0.1 -2.56 -3.29 -0.07
-2.67 -5.67 1.24 -0.58 1.5 1.5 -0.1 -1.28 - - -2.13 -0.34 1.0 0.09 -3.23 0.67
-4.86 -0.66 1.33 0.5 1.06 1.71 0.01 1.52 -1.89 - -3.38 -1.48 -0.54 -4.23 - -0.45
- -4.19 0.9 0.34 1.76 0.87 1.49 1.45 -5.0 -3.02 -0.15 -0.03 - -6.08 - -6.11
-1.6 -3.55 0.5 -0.57 0.86 0.08 -0.39 -0.07 -2.3 -2.79 -3.98 -1.97 0.93 0.75 1.02 1.39
-1.34 -2.22 0.73 -0.69 1.16 -0.9 0.25 0.57 -2.22 -2.2 -1.65 -1.76 1.0 0.14 0.03 1.33
-1.71 - 1.45 -0.47 1.7 1.36 0.67 0.31 - - -2.57 -0.32 -0.31 -0.16 -1.56 -0.78
-3.67 -9.31 0.76 0.11 1.28 1.17 1.49 1.36 - - -5.28 -1.77 -0.06 -0.71 -0.96 -0.51
-3.8 -0.55 0.24 -0.13 0.26 1.07 1.09 1.29 -2.57 -0.85 0.58 0.05 -0.54 -0.35 -2.15 -1.6
- - 1.29 1.25 1.17 1.56 0.09 -0.04 -1.82 - -1.73 - - 0.4 0.47 -0.63
-4.66 -5.99 0.83 -0.24 1.17 -0.43 0.41 1.18 -4.91 - -1.5 -0.46 0.76 1.04 -2.59 0.77
-2.16 0.02 0.75 -0.3 0.68 0.45 0.47 1.04 -2.33 -1.78 -2.03 -0.85 0.37 0.31 -0.35 0.3
-0.89 -0.93 0.34 -0.09 0.78 0.61 0.11 0.26 -6.15 - -3.64 -1.86 0.92 0.66 -0.09 1.29
-2.25 -2.41 1.1 1.31 1.29 0.87 -2.57 1.21 -1.34 -0.54 -1.83 -1.93 - 0.34 0.41 -
-3.53 -1.69 0.73 -0.23 0.76 0.61 0.19 -0.03 -4.3 - -3.46 -0.98 0.89 1.66 -1.56 0.8
-2.52 -0.17 0.72 1.01 0.87 -0.13 1.12 0.53 -0.57 -1.83 -0.18 -0.09 -0.49 -0.6 -1.81 -1.04
-1.75 -7.27 0.32 0.39 0.58 -0.18 -1.2 -0.34 -6.78 - -1.52 -1.81 1.3 0.98 1.26 1.04
-5.66 -3.03 0.55 -0.24 0.94 -0.07 -0.54 -0.14 -4.81 -6.49 -4.34 -2.56 1.18 0.58 0.91 1.67
-2.06 -2.54 -0.42 -0.17 0.24 -1.0 0.45 -0.55 -3.34 -2.9 -1.18 -0.33 1.28 1.47 0.36 1.18
-5.55 -0.1 1.4 -0.1 1.49 1.96 -0.48 0.48 -4.93 -5.87 -1.16 -0.58 -2.44 -1.58 -0.55 -1.83
-0.54 -0.83 0.35 0.41 0.99 -0.1 -0.11 0.41 -1.79 -1.9 -1.39 -1.39 1.08 0.13 -0.24 0.67
-6.95 - 1.07 0.38 1.23 1.24 1.53 1.53 -3.93 - -2.25 -0.07 -1.61 -4.29 - -1.0
-0.31 -2.44 0.52 0.97 0.88 1.07 1.03 0.99 -5.42 -3.61 0.21 -0.15 -2.37 -1.73 -0.99 -1.04
-3.66 -7.31 0.53 0.2 1.21 0.88 1.48 0.89 -6.26 -5.61 -2.26 -0.56 0.25 -1.51 -3.93 0.99
-3.43 -5.26 0.42 -0.26 0.66 0.93 0.06 -0.44 -5.65 -6.07 -1.5 -0.33 0.95 1.58 -0.62 0.76
-1.32 -6.43 1.06 -0.06 1.28 1.71 1.1 0.79 -5.35 - -2.93 -0.97 -0.83 -0.51 -0.22 -2.54
- -4.42 1.39 0.61 1.55 1.67 -0.09 0.8 - - -2.08 -1.87 -1.29 -2.97 0.42 -0.67
- - 1.85 0.02 0.8 1.39 0.74 1.49 - - 0.1 -0.0 - - - -1.12
-5.98 -3.28 0.47 0.21 1.28 1.27 1.37 0.99 - - -1.72 -0.17 -0.28 -2.37 -2.3 0.6
- -4.22 1.17 0.3 1.42 1.44 1.19 0.26 -3.96 - -0.69 1.16 -1.07 -3.75 - -2.78
-0.76 -0.79 0.74 0.8 0.81 0.34 0.79 0.32 -1.83 -1.32 -0.72 -1.36 0.5 -0.53 -1.22 0.26
-4.13 -4.53 1.19 0.47 1.2 2.04 1.0 0.25 -1.9 -2.58 -0.81 -0.09 -2.3 -3.98 -2.91 -1.68
-2.58 -3.26 1.34 0.35 1.27 1.38 0.86 0.35 -3.84 -6.11 -0.82 0.54 -0.67 -2.77 -2.28 -0.44
-2.5 -4.66 1.13 1.09 1.67 0.6 1.96 0.7 - -6.8 -2.44 0.07 - - - -
-2.33 -4.83 1.03 0.86 1.63 2.24 1.04 0.97 - - -4.48 -5.0 - - - -5.18
-0.47 -1.62 0.36 0.14 0.52 0.63 0.03 -0.71 -1.82 -2.27 -0.93 -0.86 0.64 0.62 0.89 0.51
- -1.01 1.08 0.93 1.65 1.37 1.12 0.9 - - -1.74 -2.07 -2.29 -2.38 -0.73 -2.41
- - 0.3 -0.25 -0.09 1.22 -0.19 0.37 - - - - 1.32 1.01 -0.22 1.65
-1.04 -0.81 -0.15 -0.06 0.37 0.18 0.37 -0.02 -1.4 -1.28 -1.05 -0.49 0.91 0.71 0.39 0.66
0.59 -3.8 1.29 0.29 1.49 1.63 0.77 1.24 -3.01 -3.96 - -1.71 -2.74 - - -2.87
-2.9 -3.75 0.59 0.68 0.97 0.26 1.02 0.37 -1.69 -2.9 -1.61 -1.24 0.88 0.47 -3.63 0.76
-3.9 -1.04 0.64 0.69 1.25 1.4 0.02 1.06 -5.35 - -0.97 0.51 -0.76 -0.78 -1.44 -0.6
- -0.57 0.91 -0.33 0.45 0.04 1.16 0.48 - - - - - -0.45 1.21 1.85
-3.88 -4.93 0.05 -0.58 -0.19 0.19 0.0 -0.08 -1.3 -2.76 -2.17 -3.3 0.79 -0.3 2.43 0.5
- - 1.54 1.58 1.13 2.04 -1.54 -1.21 -0.29 - -0.78 0.7 - - - -
-5.7 - 1.37 0.73 0.84 1.45 0.81 0.85 -2.95 -1.75 -2.37 -0.96 0.14 -2.46 -2.97 0.17
-3.29 -3.9 1.04 0.72 1.25 1.3 1.16 0.51 -2.33 -5.54 -1.7 0.52 -0.14 -3.48 -4.87 -0.64
-3.96 -1.3 1.04 0.64 0.54 0.47 1.18 1.1 0.16 -0.41 -1.26 -0.22 -1.02 -2.6 -1.27 -1.15
-4.02 -0.38 0.82 0.91 1.79 -0.16 1.46 0.68 -6.44 -5.06 -2.17 -1.72 -1.12 -0.59 -1.69 -0.29
-1.89 -7.11 -0.43 -0.71 -0.3 -0.29 -0.86 -1.41 -5.12 -5.81 -1.81 -0.64 1.99 1.62 -0.28 1.57
-3.24 -2.98 0.48 0.61 1.41 0.67 0.64 1.3 - - -1.39 -2.49 1.57 -1.23 - -0.67
-1.06 -2.79 0.64 0.78 1.15 1.19 1.33 1.38 -1.52 -5.58 -3.22 -0.53 -0.82 -2.38 - -0.82
-1.75 -2.23 -0.19 -0.69 -0.44 0.08 -0.79 -1.39 -3.74 -4.0 -2.42 -1.87 1.44 1.66 0.95 1.5
-1.1 - 1.22 0.45 1.25 1.44 1.33 0.77 - - -1.6 -0.45 - -2.18 -0.11 -1.79
-1.39 -3.41 -0.09 -0.3 -0.35 -0.14 -0.49 -0.1 -5.47 - -0.47 -1.08 1.26 0.91 1.46 1.13
-0.18 -0.76 0.67 0.48 0.31 0.79 1.0 1.04 -2.28 -3.59 0.17 -0.15 -0.86 -1.11 -0.77 -0.75
-1.93 -1.59 0.83 0.86 1.1 1.36 0.62 0.1 -1.02 -0.63 -0.24 -0.1 -1.03 -1.8 -1.72 -1.03
-1.56 -3.23 1.2 -0.57 1.1 1.4 -0.83 0.05 - - -3.92 -4.03 0.1 1.2 -0.73 1.08
-4.91 - 0.61 -0.14 0.82 0.87 1.94 1.32 -4.91 -5.85 -1.17 -0.14 -1.1 -1.13 -1.58 -0.09
-2.56 -8.38 -1.13 -3.04 -0.94 -1.23 -1.96 -1.7 - - -6.92 -3.94 1.66 2.43 0.91 1.7
-5.84 - 1.5 0.38 1.07 1.15 1.19 1.24 - - -1.05 -0.48 -0.32 -1.9 - -0.67
-4.06 -9.13 1.05 0.84 1.44 1.76 1.03 1.55 -8.03 -5.38 -2.47 -0.42 -6.68 - -5.71 -
-3.69 - -0.25 -0.64 0.16 -0.36 -0.1 -0.57 - - -1.51 -1.62 0.23 2.56 0.57 0.76
- - 1.49 0.0 1.18 1.95 1.73 1.08 - - - -2.27 - -3.6 -1.53 -
-1.24 -1.06 0.89 0.7 0.51 0.93 0.79 0.47 -0.59 -1.12 -0.28 -0.18 -0.57 -0.68 -1.52 -0.53
-1.01 -0.46 0.66 1.11 1.6 0.99 0.53 1.32 -0.96 -1.71 -0.65 -0.87 -6.0 - - -4.53
-0.42 -2.54 0.22 0.22 1.08 0.91 0.93 0.43 -3.22 -4.06 -0.81 -0.35 0.19 -0.17 0.03 -0.1
-3.07 - 0.94 -0.25 1.35 1.66 0.89 0.85 -3.16 - -5.39 -1.03 0.52 -1.37 - 0.4
-2.18 -3.26 -0.55 -2.51 -0.72 -0.27 -1.62 -1.16 -5.02 -6.96 -3.23 -2.39 1.71 1.39 2.35 0.35
-4.42 -2.53 -0.93 -1.95 -0.49 -1.93 -1.69 -0.66 - - - -4.85 2.19 1.35 -1.39 2.48
-2.46 -2.75 -0.12 0.23 1.28 -0.11 1.23 0.32 -1.34 -2.12 -2.32 -2.93 0.55 0.55 -0.17 0.88
-3.67 -3.43 0.98 0.41 1.96 1.81 -0.23 0.33 - -4.53 -3.49 -1.28 0.2 -1.36 - -0.07
- -3.19 0.75 0.15 1.7 0.79 1.39 0.86 - - -1.39 0.38 -0.73 -1.82 - 0.15
-3.72 -2.64 1.29 0.54 1.0 1.37 1.05 0.9 -4.25 -6.19 -0.69 0.97 -1.35 -6.0 - -1.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.