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Heatmap: Cluster_247 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.43 3.93 0.03 0.0 0.1 0.03 0.0 8.52 13.95 9.68 0.09 0.09 1.24 1.16 0.44 0.62
2.08 5.81 0.0 0.21 0.27 0.08 0.0 8.45 7.0 6.74 0.13 0.37 5.52 4.59 2.41 4.79
21.56 20.99 2.93 4.47 3.65 3.92 43.89 109.56 122.77 97.01 21.76 16.95 13.27 11.6 5.39 14.65
29.75 46.18 4.81 8.15 7.74 9.67 51.34 65.71 128.88 122.3 32.88 32.48 19.28 16.39 14.83 24.47
4.66 9.15 1.25 2.69 1.83 3.28 2.34 17.83 23.67 16.94 2.3 1.16 4.75 3.0 1.4 4.45
6.82 60.11 1.27 0.33 3.18 0.52 1.56 184.81 186.82 162.89 1.19 3.32 1.99 3.92 3.13 6.58
18.93 15.27 3.77 2.64 3.51 5.72 19.2 36.59 50.09 59.28 12.03 8.76 14.63 13.46 7.26 14.74
3.3 1.62 0.47 0.35 0.75 1.33 2.05 5.2 11.83 8.0 2.91 1.69 7.32 7.85 4.5 9.32
19.94 20.68 6.95 8.31 10.3 10.09 43.22 68.84 108.69 97.88 32.73 26.49 24.49 15.31 15.01 29.58
7.83 3.03 0.6 1.21 1.75 1.95 4.94 16.29 19.44 18.77 4.07 2.96 9.78 9.5 2.96 13.94
7.35 11.03 0.0 3.48 0.9 0.89 13.18 14.65 20.68 29.06 8.36 5.46 9.07 19.1 0.0 8.33
7.38 8.52 1.75 0.57 2.38 2.96 4.54 22.28 34.82 26.15 3.12 2.28 7.13 5.69 3.64 4.85
11.99 17.96 6.94 8.23 6.97 6.21 9.68 32.73 42.2 43.39 8.48 11.6 13.23 17.09 13.62 14.02
18.5 10.37 4.75 2.71 6.63 8.06 15.04 26.31 31.9 31.88 8.97 4.13 24.89 22.41 12.82 24.42
33.16 29.67 3.42 2.99 7.27 9.49 26.69 48.78 75.34 85.22 29.31 21.28 19.64 21.91 16.43 20.8
1.11 11.16 0.75 0.45 0.46 0.12 0.28 23.87 35.47 27.47 1.33 0.75 0.0 3.43 2.51 6.42
6.74 11.33 1.03 0.81 1.9 1.76 3.53 19.38 18.13 23.89 5.64 4.24 16.2 13.29 6.12 18.28
21.03 6.35 1.26 1.49 2.97 20.76 17.46 70.68 66.96 68.13 9.27 3.86 2.18 1.33 2.3 5.74
1.07 6.92 0.0 0.0 0.0 0.0 0.14 14.1 14.67 11.96 0.0 0.0 11.1 6.08 1.6 22.86
18.86 31.01 7.94 9.31 9.89 8.07 21.59 41.78 55.05 62.12 20.71 20.38 17.55 14.13 6.89 15.84
1.14 1.25 0.51 0.19 0.74 0.5 1.81 3.44 6.37 6.16 2.22 2.12 3.49 1.87 1.96 2.45
2.5 0.64 0.29 0.0 0.23 0.0 0.22 9.61 8.86 8.65 0.0 0.0 2.67 3.25 1.05 3.43
6.43 5.95 1.11 0.55 0.34 0.53 5.37 31.67 30.6 35.21 6.43 3.29 6.11 3.54 2.29 7.74
5.98 12.15 0.45 0.61 0.36 3.58 4.03 18.52 20.92 23.33 9.71 4.37 3.78 2.6 0.3 2.89
31.07 18.5 1.05 0.41 1.5 0.59 4.04 87.65 83.86 89.66 3.55 1.08 16.0 17.11 13.18 14.54
13.33 7.14 5.11 4.77 8.31 5.73 13.86 22.94 47.9 37.56 15.13 12.47 16.26 11.43 7.39 15.01
10.29 23.49 0.32 0.32 0.63 0.5 0.56 30.71 37.36 21.15 0.52 2.69 13.95 9.9 3.31 13.02
4.74 14.49 0.6 2.21 0.15 0.0 2.31 34.9 39.54 28.11 2.63 2.15 1.75 1.28 0.74 3.32
28.08 16.36 8.36 7.0 10.49 10.5 22.6 56.28 82.8 68.13 22.08 17.77 14.01 11.16 9.33 16.79
6.73 21.27 2.07 1.38 4.75 1.76 1.89 36.53 45.67 36.82 1.83 2.17 23.46 19.78 12.43 18.98
5.86 14.45 1.27 3.51 0.71 2.44 17.24 22.53 30.29 38.27 8.15 8.48 16.5 14.87 9.37 22.55
20.55 47.22 7.74 5.24 8.13 5.92 36.36 75.51 117.57 97.9 16.14 7.68 21.31 18.16 9.66 16.85
6.71 14.04 3.98 3.67 2.4 2.86 5.88 31.24 39.72 32.48 1.37 1.91 73.86 78.47 48.11 53.52
23.06 11.91 0.74 1.32 1.27 2.46 15.99 49.31 100.51 88.31 18.97 15.85 10.13 7.39 3.56 14.69
9.88 18.96 2.54 3.35 3.68 3.21 15.02 24.37 30.32 42.36 10.83 7.25 14.92 17.52 7.19 11.5
10.97 8.06 2.35 2.04 4.22 4.3 11.9 17.16 22.86 20.49 8.16 7.29 9.24 11.06 7.45 8.12
39.99 39.65 12.0 14.8 9.67 15.66 23.58 76.4 146.76 58.05 22.36 19.01 13.98 13.0 10.59 15.15
6.06 4.82 0.48 0.51 1.56 1.79 4.24 8.14 9.07 10.67 3.11 2.89 7.4 7.38 5.6 8.43
74.72 38.59 25.1 27.93 30.82 33.92 59.67 86.57 172.54 92.34 45.3 43.98 74.36 56.31 53.77 66.19
38.09 36.37 11.87 14.37 13.23 17.66 39.21 84.36 116.83 67.71 39.59 21.76 9.17 7.83 6.82 5.69
48.63 37.26 13.29 17.15 17.32 32.09 42.16 118.02 100.38 115.91 29.39 26.0 37.0 32.58 38.41 30.72
14.61 83.37 2.5 4.32 8.72 17.12 1.23 235.29 291.53 158.93 4.64 3.45 2.44 0.65 0.23 1.23
14.13 10.35 3.5 2.81 4.16 4.76 18.4 36.83 51.64 43.05 13.98 8.46 11.62 9.75 7.51 13.73
42.57 20.87 7.09 5.09 9.34 10.86 29.54 72.25 87.23 69.79 22.16 20.66 67.27 49.7 45.69 56.79
33.39 42.08 6.49 4.66 12.72 12.53 31.28 101.82 95.01 88.72 33.64 28.98 47.18 45.58 40.01 48.79
8.24 5.66 1.83 1.0 2.98 1.95 4.8 20.91 20.47 25.42 5.2 4.25 17.54 15.85 12.38 13.48
2.23 22.37 0.15 0.22 0.27 0.09 0.4 35.3 39.02 33.96 0.16 0.19 1.7 1.11 1.56 2.62
15.76 10.81 3.67 3.19 2.78 5.98 21.18 39.4 74.55 60.62 20.49 23.74 33.46 32.27 26.82 46.6
13.65 15.33 0.0 0.33 0.14 0.13 0.48 37.66 34.57 36.46 1.28 1.19 24.05 14.18 7.56 16.33
28.41 12.42 6.91 11.4 8.84 10.57 19.89 34.54 69.44 37.9 15.84 8.72 23.79 19.91 9.43 23.89
1.04 4.21 0.0 0.04 0.49 0.1 0.04 6.67 6.77 5.6 0.55 0.56 3.14 2.87 1.03 2.52
2.13 11.5 0.32 0.04 0.0 0.0 0.02 20.33 22.46 19.33 0.14 0.72 1.08 1.01 0.85 2.98
13.34 8.55 2.47 2.64 2.18 2.8 9.87 20.34 30.67 29.5 10.89 3.65 10.46 8.7 6.8 18.13
0.54 18.2 0.37 1.02 1.18 7.28 0.17 73.72 62.29 62.99 2.72 0.3 0.0 0.0 0.0 0.0
27.13 12.67 7.14 10.67 8.07 12.87 25.47 52.07 47.46 53.16 22.95 20.28 22.17 18.48 12.12 28.71
28.68 14.29 1.77 1.7 0.06 0.11 9.61 94.61 94.76 80.94 4.13 11.53 55.7 38.34 35.7 75.21
20.08 7.75 2.33 2.36 1.58 3.27 12.87 47.59 51.78 41.71 16.26 9.92 11.06 3.28 3.1 26.9
10.11 13.59 1.53 2.41 1.92 2.46 2.83 30.2 37.86 41.53 2.37 1.47 8.78 10.11 8.47 10.29
35.78 20.29 6.52 8.27 10.34 12.65 21.31 80.78 121.14 86.37 35.52 26.31 36.96 21.84 14.04 44.34
2.41 12.6 1.45 0.84 2.37 2.33 3.4 26.33 42.74 32.1 3.2 5.94 0.25 0.46 1.46 0.68
24.85 14.25 3.88 3.68 4.72 5.42 16.02 32.26 45.48 53.93 13.36 16.31 17.52 14.35 13.27 24.13
28.29 21.17 7.24 9.21 19.38 28.66 42.49 63.45 197.66 160.94 51.16 33.95 13.73 13.54 7.47 16.31
24.57 27.76 6.06 3.05 4.82 5.11 32.48 62.07 68.89 91.91 18.16 14.16 41.28 52.68 21.12 58.06
1.68 1.99 0.43 0.16 0.56 0.67 1.37 3.7 4.41 3.59 1.43 0.57 4.66 3.84 2.21 5.61
8.95 9.49 0.54 0.57 1.75 0.44 6.08 29.75 32.8 38.07 5.12 3.53 7.73 6.91 2.64 12.64
14.94 14.07 4.64 4.02 7.17 8.72 13.92 25.25 31.89 26.61 9.45 10.47 11.47 14.74 10.43 18.7
79.71 103.65 5.02 4.48 4.65 5.86 7.06 380.72 382.02 467.49 6.1 6.06 52.34 43.12 32.67 65.04
47.79 18.42 5.34 5.3 9.1 8.12 35.51 78.75 93.95 108.8 14.96 11.16 28.63 26.16 16.49 32.54
21.7 22.43 14.38 13.19 15.42 14.97 33.93 60.17 91.0 85.31 31.07 34.24 17.13 10.87 9.13 12.68
20.02 54.49 0.2 0.2 0.13 0.38 0.25 72.7 85.55 109.37 0.12 0.06 5.01 3.79 2.9 11.37
88.94 70.86 11.4 17.54 20.28 28.1 59.49 145.19 196.75 192.27 50.28 37.53 40.81 37.89 34.92 52.59
12.98 10.94 1.07 1.86 4.14 2.62 8.42 27.1 40.03 36.82 11.62 12.69 7.5 12.87 14.26 8.95
13.93 18.19 0.58 0.0 0.6 1.19 23.4 35.68 97.76 63.86 8.42 7.74 101.21 45.13 34.13 152.42
19.87 17.38 4.77 5.6 7.03 8.69 12.7 30.44 35.89 37.38 12.32 13.26 25.3 30.74 23.83 26.44
27.1 55.69 1.77 3.19 10.44 23.23 5.57 274.65 251.07 250.53 7.08 2.54 12.97 9.16 8.65 20.89
13.28 20.19 1.2 1.86 1.4 2.34 5.64 40.91 45.52 53.64 3.93 5.31 15.1 11.81 8.92 10.62
7.27 40.28 0.0 0.0 0.31 0.14 0.72 55.22 67.03 44.03 0.0 0.22 14.56 20.94 3.18 14.35

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)