Heatmap: Cluster_165 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G005100.1	-1.84	0.73	-	-0.72	-	-	-	-0.71	-	-	2.93	1.83	-	0.73	-	-
Sobic.001G210250.1	-	-	-	-	-	0.25	-	-	-	-	2.97	1.78	-	-	1.83	-
Sobic.001G246700.2	-6.99	-0.16	-2.47	-2.38	-1.46	-0.45	1.11	-6.51	-	-	2.9	1.99	-	-	-	-
Sobic.001G273500.1	-7.7	-	-5.95	-2.97	-1.45	-2.03	0.79	-2.09	-1.06	-1.65	3.07	2.03	-6.03	-	-	-
Sobic.001G405400.1	-4.7	-5.4	-4.19	-4.85	-1.47	-2.23	0.28	-0.37	-3.68	-2.49	3.24	1.76	-3.15	-5.24	-	-3.86
Sobic.002G065900.2	-	-	-	-	-	-	-	-4.37	-	-	3.58	2.0	-	-	-	-
Sobic.002G077700.1	-	-	-	-	-	-	-	-	-0.17	-1.69	3.38	2.14	-	-	-	-
Sobic.002G100950.1	-	-	-	-	-	-	-	-	-	-	-0.2	-1.9	2.69	-	0.35	2.83
Sobic.002G135700.1	-	-	-	-	-	-	-	-	-	-	3.45	2.34	-	-	-	-
Sobic.002G229300.1	-	-	-	-	-	-	-	-	-	-	3.48	2.27	-	-	-	-
Sobic.002G229400.1	-	-	-2.16	-1.57	-0.18	-2.52	-	-	-	-3.85	3.24	2.29	-	-	-	-
Sobic.002G238200.1	-	-	-	-	-	-	-	-	-	-	3.41	2.42	-	-	-	-
Sobic.002G321300.1	-5.22	-5.45	-1.03	-1.96	-2.81	-0.9	-3.19	-2.44	-0.99	-0.28	3.09	1.83	-1.66	-2.28	-3.81	-2.19
Sobic.002G352000.1	-3.55	-2.65	-4.72	-3.47	-1.61	-1.88	1.23	-0.87	-4.51	-7.26	2.95	2.01	-4.39	-3.9	-5.0	-2.78
Sobic.002G368901.1	-3.85	-3.21	-6.12	-	-4.42	-5.15	-1.04	-1.85	-4.51	-3.87	0.99	0.3	1.39	1.49	1.88	1.33
Sobic.003G068950.1	-1.42	-1.17	-	-	-	-	1.29	-1.69	-	-	3.1	1.94	-	-	-	-
Sobic.003G104350.1	-0.75	-2.06	-1.41	-1.85	-1.38	-1.78	-0.1	-0.48	-1.31	-0.53	1.46	1.01	0.6	0.8	0.96	0.16
Sobic.003G295500.1	-	-	-	-	-	-1.31	-	-	-	-	3.33	2.09	-	-2.03	0.04	-
Sobic.003G339800.2	-1.24	-0.33	-0.31	-0.83	-0.34	-0.16	-0.41	0.27	-0.5	-0.2	1.7	1.45	0.33	-1.35	-	-0.8
Sobic.003G342600.2	-1.33	-2.0	-3.07	-3.55	-4.75	-4.34	0.4	-0.17	-2.73	-1.8	2.62	2.32	-3.97	-1.6	-0.18	-
Sobic.003G437001.1	-	-	-	-	-	-	-	-	-	-	3.45	2.34	-	-	-	-
Sobic.004G112300.1	-	-	-2.13	-2.14	-0.66	0.35	-2.9	-3.29	-1.79	-0.32	3.07	1.97	-	-	-	-
Sobic.004G166000.2	-2.01	-	-	-	-	-	-	-	-	-	3.47	2.21	-	-	-	-
Sobic.004G288200.1	-3.49	-8.04	-2.9	-1.6	-2.65	-1.47	-0.59	-1.18	-0.57	-0.85	3.11	1.88	-4.62	-4.13	-4.65	-3.16
Sobic.005G018200.1	-11.59	-	-3.51	-4.38	-1.81	-0.86	-1.41	-2.41	-1.09	-0.91	3.21	2.06	-	-	-	-
Sobic.005G018300.2	-	-	-7.29	-6.95	-	-	-9.96	-4.33	-8.71	-	3.4	2.42	-	-8.47	-	-
Sobic.005G146533.1	-	-	-	-	-	-	-	-	-	-	3.51	2.21	-	-	-	-
Sobic.005G156850.1	-	-	-	-	-	-	-	-	-	-0.57	3.43	2.18	-	-	-	-
Sobic.005G213950.1	-	-	-	-	-	-	-	-	-	-	3.54	2.12	-	-	-	-
Sobic.006G023100.1	-	-	-	-	-	-0.37	-	-	-	-	3.51	1.93	-	-	-	-
Sobic.006G025700.1	-	-	-	-	-	-2.8	-	-1.38	-	-0.6	3.34	2.23	-	-	-	-
Sobic.006G026400.1	-	-	-6.94	-7.9	-9.16	-6.26	-3.95	-7.39	-3.08	-2.5	3.37	2.39	-	-	-	-
Sobic.006G026500.1	-	-	-7.24	-	-	-	-	-	-6.61	-6.18	3.48	2.26	-	-	-	-
Sobic.006G062900.1	-2.31	-2.07	-1.7	-2.11	-2.66	-1.52	-0.75	-0.63	-1.96	-1.11	0.85	0.36	0.46	1.89	-0.35	1.85
Sobic.006G091500.1	-6.14	-	-2.05	-3.77	-4.2	-6.94	0.77	-0.79	-	-4.27	3.14	2.15	-	-6.08	-	-
Sobic.007G003600.1	-	-0.08	-3.23	-3.49	-4.46	-4.85	-3.71	-4.16	-	-	3.39	2.07	-	-10.78	-	-
Sobic.007G008700.1	-	-	-0.7	-1.75	-1.32	-0.14	-2.65	-1.27	-	-5.36	3.01	2.12	-1.26	-3.16	-	-2.19
Sobic.007G095100.1	-0.94	-	-1.98	-	-	-2.02	-	-0.22	-	-	3.14	1.97	-	-1.16	-0.09	-
Sobic.007G125400.1	-	-	-	-2.69	-	-1.47	-	-1.09	-	-	3.35	2.27	-	-	-	-
Sobic.007G154300.1	-	-	-3.3	-6.29	-3.5	-2.34	1.2	-0.89	-	-2.81	3.3	1.48	-	-	-	-
Sobic.007G164750.1	-2.61	-3.58	-3.37	-1.76	-2.97	-0.98	-4.9	0.82	-5.91	-6.86	3.11	1.88	-3.06	-4.74	-4.67	-1.24
Sobic.007G191500.2	-	-	-	-	-4.7	-	-	-	-	-	3.44	2.36	-	-	-	-
Sobic.007G206400.2	-	-	-	-	-0.14	-	-0.25	-1.27	-1.96	-	2.13	1.03	1.32	1.55	-	0.79
Sobic.008G002600.1	-	-	-	-	-	-	-2.19	-	-2.52	-	3.41	2.33	-	-	-	-
Sobic.008G018700.1	-	-	-1.47	-3.39	-2.41	-1.36	-2.8	0.84	-3.57	-4.09	3.28	1.67	-	-	-	-
Sobic.008G052500.1	-2.07	0.23	-	-	-	-2.16	-	-3.3	-2.56	-0.91	3.21	1.76	-	-0.97	-	-1.32
Sobic.008G130500.2	-	-	-	-	-0.37	-	-1.17	-0.34	-	-	2.74	1.05	-	-	2.39	-
Sobic.008G171600.2	-3.4	-	-	-	0.32	-	0.03	-0.22	-	-	2.85	2.03	-0.7	-0.21	-	-
Sobic.009G011200.2	-	-	-	-	-	-	-	-	-	-	2.48	0.79	-	-	3.12	-
Sobic.009G076700.1	-	-	-5.89	-7.14	-7.36	-	-1.68	-10.16	-	-	3.56	1.96	-	-	-	-
Sobic.009G118700.1	-	-	-4.36	-5.03	-	-	-6.03	0.43	-1.62	-0.64	2.51	1.04	1.14	-0.95	0.53	0.76
Sobic.009G150100.1	-	-	-	-	-	-	-	-	-	-	3.45	2.34	-	-	-	-
Sobic.009G198000.1	-	-	-0.58	-1.34	-1.29	-2.08	-3.76	0.51	-1.36	-0.42	2.9	2.08	-	-	-	-
Sobic.010G004800.1	-4.35	-	-4.57	-	-1.63	-3.02	-1.65	0.76	-4.0	-1.94	2.98	1.99	-	-0.94	-0.68	-2.78
Sobic.010G029700.1	-	-	-4.02	-4.59	-3.81	-7.98	0.45	-7.09	-	-	3.37	2.05	-	-	-	-
Sobic.010G164100.1	-	-	-	-	-	-	-	-	-	-	3.52	2.19	-	-	-	-
Sobic.010G225251.1	-	-	-	-	-	-	-	-	-	-	3.45	2.34	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.