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Heatmap: Cluster_149 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.35 -0.79 -2.67 -2.44 -2.06 -1.63 -0.04 -0.36 -0.5 0.03 -0.03 -1.25 1.22 0.75 0.37 0.84
1.39 0.02 -1.28 -0.8 -1.07 -0.54 0.11 -0.8 0.27 0.02 -0.41 -0.12 -0.18 0.38 0.37 0.26
2.11 -0.06 - - - -2.56 -1.87 -3.6 -0.14 -1.08 -3.85 -2.95 1.47 0.99 0.68 1.17
0.92 0.12 -1.08 -1.33 -1.19 -1.24 -0.35 -0.56 -0.6 -0.41 -1.3 -0.95 0.87 0.78 0.86 1.09
1.76 -2.79 -7.02 -6.84 -3.96 -2.65 -5.01 -3.72 0.22 -0.18 -5.09 -4.87 1.5 0.45 -0.16 2.3
2.56 -1.47 - -2.71 -1.0 0.14 -0.62 -1.39 0.05 -0.71 -0.47 -0.44 0.46 0.37 -0.56 -1.07
1.01 -1.99 -2.09 -3.38 -2.27 -1.7 -0.8 -1.56 -2.72 -1.9 -1.06 -0.97 1.41 1.51 1.43 1.24
3.08 -3.42 - -4.48 -3.11 -2.26 0.6 0.24 -3.23 -4.17 - -4.24 -0.59 0.08 -1.93 1.14
1.21 -0.43 -2.46 -2.86 -2.47 -2.07 -1.44 -1.68 -1.41 -1.49 -1.95 -2.12 1.4 1.5 1.17 1.37
1.3 -1.52 -2.23 -2.65 -1.47 -0.9 -0.56 -1.21 -1.8 -1.34 -1.07 -1.14 0.81 1.1 1.63 1.14
2.71 -0.98 -2.44 -2.12 -2.02 -1.43 -0.04 -0.43 -4.61 -3.94 -1.33 -2.77 0.72 0.27 -0.8 1.09
2.38 1.81 - - -0.6 -1.7 -2.39 0.56 0.52 - 0.62 - 0.19 -0.9 - -
0.84 -0.48 -2.39 -1.75 -1.76 -1.35 -0.1 -0.54 -0.41 -0.73 -0.06 -1.53 0.95 1.19 0.61 1.21
0.76 -1.79 -2.2 -2.27 -1.39 -0.9 -0.78 -1.34 -1.98 -0.97 -1.46 -1.43 1.29 1.35 1.19 1.54
2.78 1.31 -2.78 - - - -0.36 -5.43 1.37 0.31 0.79 - - -2.96 - -
0.79 -0.81 -1.16 -1.35 -0.95 -0.75 -0.39 -1.0 -0.8 -0.62 -0.5 -0.78 0.97 1.02 0.7 1.24
1.2 -0.91 -1.17 -1.23 -0.84 -0.72 -0.05 -0.44 -0.78 -0.77 -0.34 -0.65 1.04 0.68 0.71 0.62
2.22 -1.95 -0.86 -1.22 -0.05 -0.47 0.19 -0.84 -1.3 -1.1 -0.53 -0.54 0.17 -0.12 0.46 0.07
2.28 -1.94 -2.26 -3.06 -1.02 -1.14 0.16 -0.37 -1.08 -0.37 -1.61 -2.33 1.12 0.22 -0.33 0.86
1.27 0.11 -1.05 -0.95 -1.16 -0.91 -0.07 -0.76 -0.37 -0.62 -0.42 -0.5 0.52 0.75 0.73 0.41
1.01 -0.59 -1.23 -1.42 -0.69 -0.79 -0.31 -0.52 -0.55 -0.54 -0.61 -0.82 0.81 0.78 0.48 1.25
1.47 -5.8 -3.27 -3.09 -4.08 -2.81 -3.03 -1.25 -0.25 -0.84 -2.61 -2.21 1.58 1.0 1.21 1.67
1.22 0.33 -1.8 -2.37 -1.34 -1.08 -0.43 -1.28 0.01 -0.38 -0.72 -0.93 0.42 0.81 0.98 0.95
1.61 -0.28 -2.22 -2.6 -1.56 -1.46 -0.24 0.04 0.43 -0.03 0.27 -0.45 0.56 0.03 -0.18 0.61
1.06 0.27 -0.44 -0.41 -0.46 -0.16 -0.25 -0.31 0.12 0.1 0.02 -0.04 -0.17 -0.03 -0.18 0.1
1.77 0.2 -1.96 -1.77 -1.75 -0.93 0.07 -0.25 0.22 -0.54 -0.26 -0.7 0.12 0.56 -0.3 0.59
1.57 -0.49 -2.19 -2.71 -2.02 -1.62 -1.02 -0.51 -0.61 -0.67 -1.56 -1.82 1.08 0.84 0.97 1.27
1.51 0.55 -1.14 -1.1 -1.24 -1.08 0.46 -0.46 -0.89 -1.06 -0.62 -0.75 0.25 0.58 0.7 0.26
1.24 0.32 -1.7 -2.47 -1.65 -1.3 0.02 -0.5 -0.75 -1.01 -0.53 -0.29 0.47 0.69 1.01 0.88
1.12 -1.0 -2.12 -2.64 -2.35 -2.38 -0.4 -0.53 -0.27 -1.1 -0.44 -0.96 1.26 0.63 0.87 1.48
1.99 -0.84 -2.88 -3.43 -1.11 -0.47 -1.1 -0.72 -2.9 -3.84 -1.48 -1.26 1.19 1.02 0.64 1.1
2.38 -0.63 -2.0 -1.95 -1.7 -1.41 0.02 -1.0 -0.91 -0.74 -0.32 -0.13 0.18 0.27 0.01 0.33
1.13 -0.11 -1.25 -1.7 -1.79 -1.56 -0.28 -1.54 -1.24 -0.8 -0.24 -0.43 0.89 0.83 0.98 1.11
1.69 -0.21 -1.41 -1.9 -0.81 -0.85 -0.05 -1.19 -2.05 -1.49 -0.64 -0.76 0.88 1.04 0.67 0.5
1.08 -1.0 -1.39 -1.75 -1.22 -0.84 -0.16 -0.67 -1.47 -0.88 -0.6 -0.64 1.02 1.1 0.68 1.14
0.14 -3.01 - - - -3.26 -2.38 -3.21 -2.89 -3.44 -3.35 -4.47 1.37 1.55 1.09 2.67
2.49 0.36 -1.09 -1.25 -1.02 -1.17 -0.18 -0.88 0.33 -0.21 0.32 0.34 -1.74 -2.02 -3.42 -0.82
1.47 0.19 -1.8 -1.88 -0.94 -0.74 0.17 -0.67 -0.02 -0.6 -0.46 -0.19 0.38 0.63 0.67 -0.06
1.17 -0.3 -0.93 -1.63 -0.83 -0.66 0.24 -0.78 -0.77 -0.42 -0.26 -0.23 0.7 0.75 0.44 0.53
2.3 -0.21 -3.85 -3.16 -3.05 -1.64 -0.97 0.0 -0.35 -0.45 -0.75 -1.29 0.54 0.68 0.04 0.55
1.84 0.92 -2.59 -3.41 -1.06 -0.72 -0.36 -0.64 -0.32 0.1 -0.23 -0.65 0.2 -0.14 -0.15 0.53
3.05 -0.83 -3.17 - -4.19 -1.93 0.18 -1.04 -1.13 -0.81 -1.66 -3.74 0.24 0.15 -2.04 0.18
1.3 -0.35 -0.52 -0.58 -1.16 -0.52 0.08 0.11 0.02 -0.03 -0.47 -0.67 0.36 -0.11 -0.17 0.74
0.26 -2.15 - - -3.43 - -2.35 -1.09 -0.99 - -1.87 -1.4 1.58 1.4 -0.62 2.68
1.54 -0.24 -1.5 -2.23 -1.37 -1.29 0.22 -0.61 -0.08 -0.29 -0.09 -0.38 0.37 0.35 0.67 0.5
1.17 -0.12 -0.92 -1.68 -1.02 -0.62 -0.04 -0.54 -1.28 -1.24 -0.32 -0.77 1.01 0.55 0.46 1.08
1.74 -0.15 -1.68 -1.54 -1.45 -1.13 -0.05 -0.24 -0.39 -0.64 -0.92 -1.14 0.72 0.55 0.47 0.66
2.03 -3.68 -4.58 -5.44 -4.53 -5.14 -0.35 0.47 -0.23 -0.72 -6.02 -3.52 0.63 1.4 0.98 0.85
2.39 -1.15 -1.89 -2.43 -1.71 -1.54 -0.41 -0.88 -0.15 0.12 0.16 -0.46 -0.0 -0.23 -0.17 0.39
1.83 0.68 -0.72 -0.83 -1.12 -0.97 0.18 -0.51 -0.44 -0.93 -0.55 -0.48 0.06 0.06 0.08 0.08
1.16 -0.49 -1.13 -1.0 -0.67 -0.58 -0.04 -0.25 -0.4 -0.35 -0.45 -0.91 0.76 0.53 0.6 0.63
1.86 -2.33 -1.25 -1.33 -1.32 -0.91 -0.14 -0.58 -4.79 -4.95 -1.13 -1.11 1.08 1.29 0.09 1.17
3.21 -2.05 -3.74 - - -3.76 -2.82 0.87 0.72 1.09 -3.04 - -2.83 -2.34 - -2.95
3.08 -0.42 -0.86 -0.8 -2.78 -2.05 -3.8 -2.24 0.1 0.5 -1.47 -3.57 -0.63 -0.81 -2.83 -0.56
2.1 -0.13 -2.89 -2.45 -2.65 -1.85 -0.44 -0.5 -2.37 -2.31 -0.5 -1.06 1.0 0.22 0.11 1.48
2.32 -2.01 -2.04 -2.4 -1.28 -1.85 -0.38 -0.22 - - -3.06 -1.87 0.96 0.85 0.36 1.38
1.42 -0.69 -1.27 -1.51 -0.99 -1.1 -0.35 -0.87 -1.75 -1.65 -1.14 -0.97 0.93 0.94 0.88 1.26
3.09 0.14 -2.03 -2.67 -2.25 -2.08 -5.31 -3.35 1.25 -0.05 -0.12 -0.62 -3.01 -2.42 -2.88 -4.3
1.29 0.32 -1.93 -1.88 -2.69 -1.98 -0.05 -0.84 -0.6 -0.96 -0.47 -0.43 0.97 0.9 0.88 0.6
1.61 0.17 -1.49 -1.62 -1.33 -1.39 0.28 -0.54 -0.2 -0.49 -0.23 -0.07 0.04 0.48 0.57 0.21
2.02 0.37 -0.9 -0.91 -0.73 -0.42 -0.18 1.11 0.0 -0.09 -0.2 0.16 -2.4 -2.06 -1.29 -1.21
2.18 -0.48 -2.49 -3.44 -1.97 -0.57 0.12 -1.04 -4.56 -5.14 -1.64 -1.47 1.02 1.15 0.49 0.65
2.38 0.6 -3.67 -3.92 -4.12 -2.08 -2.22 0.5 0.75 0.32 -0.56 -1.23 0.59 -0.29 - -0.26
1.01 0.23 -0.35 -0.75 -0.33 -0.41 0.18 -0.48 0.08 -0.2 -0.66 -0.59 0.45 0.06 -0.05 0.52
1.42 0.49 -0.75 -0.7 -0.48 -0.69 0.52 -0.62 -0.16 -0.2 -0.02 0.0 -0.58 -0.17 -0.24 0.16
1.12 -2.15 -2.34 -3.28 -1.68 -1.61 -2.27 -1.69 -6.41 -4.77 -2.0 -1.63 1.82 1.56 1.01 1.6
1.1 0.2 -0.66 -0.98 -0.66 -0.71 0.02 -0.44 -0.23 -0.45 -0.32 -0.3 0.49 0.42 0.07 0.65
1.9 0.73 -1.93 -1.78 -0.95 -0.74 0.43 -0.37 -0.41 -0.51 0.22 0.1 -0.32 -0.58 -0.21 -0.35
0.45 -0.51 -4.36 - -3.24 -3.16 -2.22 -1.09 -1.43 -2.28 -3.66 -3.77 2.03 1.34 0.4 2.11
0.96 -0.08 -0.7 -1.73 -0.93 -0.76 -0.48 -1.82 -0.82 -0.2 -0.64 -0.49 0.72 0.87 0.98 0.88
2.26 -0.94 -2.08 -2.46 -1.19 -0.97 0.17 -0.86 -1.21 -0.98 -0.69 -0.7 0.46 0.28 0.59 0.47
1.8 - - - -2.6 -2.75 -0.81 -1.0 - - -2.03 -1.13 0.77 0.9 0.16 2.52
1.32 -4.9 -4.13 -2.65 -3.91 -1.34 -1.16 -0.22 -0.17 -1.09 -0.86 -1.32 1.79 1.1 -0.12 1.41
0.85 0.08 -0.86 -1.25 -0.49 -0.47 -0.1 -0.77 -0.14 -0.22 -0.61 -0.56 0.49 0.59 0.78 0.58
1.05 0.29 -1.56 -1.47 -1.33 -0.5 -0.37 -1.32 -0.52 -0.06 -0.25 -0.28 0.58 0.75 0.68 0.69
1.22 -0.08 -1.24 -2.21 -0.77 -1.36 -0.22 -0.79 -0.83 -1.01 -0.47 -0.56 1.07 0.49 0.48 1.21
1.3 -0.04 -1.35 -2.09 -1.15 -1.29 0.08 -0.4 -0.8 -1.32 -0.32 -0.41 0.88 0.62 0.38 1.05
3.17 -0.36 -4.78 -4.44 -4.17 -6.13 -1.47 -0.99 -0.32 0.72 -1.13 -1.28 -0.87 -0.9 -1.9 -0.86
1.99 -0.04 -3.38 -4.91 -3.01 -3.41 0.25 -0.46 -0.08 -1.49 -0.98 -2.56 1.14 0.77 -0.14 1.0
1.71 0.1 -1.63 -2.83 -1.73 -1.96 0.25 -0.82 -0.23 -0.03 0.11 0.38 -0.31 0.22 0.67 0.14
1.26 -0.08 -2.48 -3.13 -2.57 -1.74 -0.57 -1.14 -0.37 -0.49 -0.53 -0.08 0.74 0.99 0.79 1.18
2.83 1.3 -2.53 -3.43 -2.89 -2.38 -1.21 -2.71 0.65 0.37 -0.36 -1.78 -2.43 -2.2 -0.87 -1.55
3.42 - - - - - - - 1.37 1.43 - - - - - -
3.21 -0.56 - -0.43 - - - - 1.68 1.09 - - - - - -
0.9 -0.84 -1.83 -2.56 -1.47 -0.6 -0.34 -0.94 -0.91 -1.25 -0.78 -1.26 1.2 1.0 0.9 1.42
1.84 -0.08 -1.44 -0.85 -1.13 -0.75 0.22 -1.34 -0.15 0.01 -0.28 -0.47 0.35 -0.13 -0.45 0.65
1.47 0.17 -1.25 -1.88 -1.8 -1.34 0.06 -0.58 -0.71 -1.03 -0.33 -0.06 0.29 0.77 1.01 0.29
-2.87 -5.32 - - - -6.2 - -4.11 - - -5.08 -7.18 2.85 -4.94 - 3.08
1.25 0.34 -0.64 -0.28 -0.32 -0.22 -0.0 -1.14 0.35 0.09 0.2 0.36 -0.68 -0.4 -0.17 -0.42
1.94 -1.54 -2.66 -2.6 -1.35 -1.72 -0.39 -0.94 -5.03 -3.97 -0.79 -1.62 1.36 1.08 0.88 1.0
1.03 -0.12 -1.09 -1.14 -1.14 -0.46 0.16 -1.01 -0.0 -0.68 -0.3 -0.23 0.58 0.77 0.42 0.59
2.04 -0.82 -2.22 -2.17 -1.92 -0.09 -0.12 0.32 -1.1 -1.52 0.02 -0.33 0.63 0.5 -0.98 0.49
1.3 -0.52 -1.97 -2.65 -1.52 -0.7 -0.96 -0.08 -0.26 -1.39 -1.24 -0.93 1.36 0.76 0.41 1.17
2.14 0.33 -0.68 -0.6 -0.87 -0.47 -1.51 -1.53 0.02 0.16 -0.56 -2.06 -0.26 0.24 0.1 -0.06
1.35 -0.17 -1.53 -2.23 -1.45 -1.38 -1.25 -0.57 -0.41 -0.43 -0.87 -0.91 0.84 0.88 1.07 0.89
3.45 1.3 - - - -12.54 - - - 1.4 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.