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Heatmap: Cluster_149 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
12.12 2.74 0.74 0.87 1.14 1.54 4.62 3.7 3.36 4.85 4.64 1.99 11.05 7.98 6.12 8.5
70.19 27.2 11.01 15.44 12.76 18.48 28.94 15.37 32.28 27.22 20.16 24.73 23.65 34.83 34.68 32.21
4.5 1.0 0.0 0.0 0.0 0.18 0.28 0.09 0.95 0.5 0.07 0.13 2.9 2.08 1.68 2.35
265.84 152.28 66.25 55.76 61.57 59.35 109.85 94.95 92.92 105.68 57.2 72.53 256.3 241.63 255.09 299.2
138.0 5.91 0.32 0.36 2.63 6.5 1.27 3.1 47.52 36.07 1.2 1.4 115.49 55.87 36.7 201.75
8.13 0.5 0.0 0.21 0.69 1.51 0.9 0.53 1.42 0.84 0.99 1.01 1.9 1.78 0.93 0.65
76.48 9.56 8.92 3.65 7.9 11.7 21.87 12.92 5.75 10.19 18.18 19.35 100.94 108.3 102.33 89.73
13.43 0.15 0.0 0.07 0.18 0.33 2.41 1.88 0.17 0.09 0.0 0.08 1.06 1.69 0.42 3.5
47.63 15.23 3.72 2.82 3.69 4.9 7.54 6.4 7.71 7.32 5.32 4.72 54.17 58.04 46.07 53.0
168.26 23.73 14.52 10.88 24.56 36.58 46.36 29.42 19.59 26.94 32.54 30.97 119.61 146.28 210.24 149.73
57.84 4.47 1.63 2.03 2.19 3.28 8.59 6.57 0.36 0.58 3.52 1.29 14.6 10.63 5.08 18.77
3.0 2.01 0.0 0.0 0.38 0.18 0.11 0.84 0.82 0.0 0.88 0.0 0.66 0.31 0.0 0.0
67.3 27.0 7.18 11.17 11.1 14.75 35.13 25.88 28.33 22.64 36.04 13.05 72.51 85.9 57.41 87.16
42.63 7.29 5.47 5.2 9.62 13.51 14.68 9.97 6.39 12.83 9.14 9.31 61.52 64.21 57.27 73.31
2.17 0.78 0.05 0.0 0.0 0.0 0.25 0.01 0.82 0.39 0.54 0.0 0.0 0.04 0.0 0.0
187.6 62.1 48.72 42.61 56.22 64.76 82.99 54.45 62.59 70.9 76.99 63.36 213.55 220.36 176.39 257.54
67.17 15.54 12.96 12.45 16.3 17.74 28.3 21.56 17.01 17.2 23.1 18.7 60.14 46.86 47.98 44.81
50.2 2.79 5.93 4.64 10.43 7.79 12.27 6.04 4.39 5.04 7.45 7.42 12.11 9.92 14.88 11.35
16.95 0.91 0.73 0.42 1.72 1.59 3.88 2.7 1.65 2.69 1.15 0.69 7.55 4.05 2.76 6.32
165.54 73.98 33.12 35.49 30.72 36.33 65.31 40.48 53.03 44.59 51.18 48.41 98.14 114.87 113.22 90.99
12.75 4.21 2.71 2.37 3.95 3.68 5.12 4.42 4.33 4.36 4.16 3.58 11.12 10.9 8.85 15.05
35.95 0.23 1.34 1.53 0.77 1.85 1.59 5.45 10.88 7.23 2.12 2.81 38.62 25.84 29.91 41.26
146.65 79.1 18.06 12.17 24.87 29.77 46.82 25.96 63.53 48.52 38.28 33.05 84.14 110.64 124.29 121.84
42.0 11.33 2.94 2.28 4.68 5.0 11.68 14.14 18.52 13.5 16.55 10.09 20.3 14.04 12.14 20.95
101.09 58.55 35.75 36.6 35.38 43.48 40.92 39.15 52.79 52.01 49.2 47.2 43.14 47.61 42.86 52.08
42.43 14.28 3.19 3.64 3.71 6.55 13.1 10.48 14.51 8.54 10.38 7.69 13.51 18.34 10.1 18.69
100.77 24.19 7.44 5.18 8.37 11.03 16.82 23.87 22.29 21.37 11.56 9.63 71.65 60.89 66.81 82.07
314.57 161.73 50.33 51.6 46.74 52.21 152.21 80.33 59.6 52.99 71.95 65.62 131.41 165.93 179.98 132.73
195.79 103.48 25.49 14.92 26.36 33.66 83.78 58.32 49.17 41.1 57.32 67.77 114.39 133.61 166.61 152.34
16.12 3.72 1.71 1.19 1.45 1.43 5.62 5.14 6.14 3.47 5.47 3.81 17.71 11.45 13.61 20.69
15.83 2.24 0.54 0.37 1.84 2.89 1.86 2.42 0.54 0.28 1.43 1.66 9.12 8.1 6.2 8.53
748.89 92.85 35.96 37.12 44.18 54.01 145.86 71.71 76.69 86.29 115.55 131.42 163.28 173.49 144.45 180.28
56.33 23.8 10.8 7.88 7.43 8.71 21.18 8.82 10.9 14.74 21.67 19.02 47.52 45.52 50.75 55.41
151.0 40.49 17.54 12.51 26.72 26.0 45.29 20.47 11.3 16.65 30.06 27.54 86.18 95.82 74.33 66.13
342.86 80.96 61.61 48.02 69.65 90.75 145.11 101.79 58.59 88.1 106.71 103.79 329.24 346.47 259.2 357.73
18.98 2.14 0.0 0.0 0.0 1.79 3.3 1.86 2.32 1.59 1.68 0.77 44.4 50.3 36.75 109.4
93.73 21.43 7.86 7.02 8.25 7.44 14.71 9.11 21.04 14.47 20.86 21.16 4.99 4.13 1.56 9.47
637.12 263.46 66.28 62.84 120.13 138.33 259.23 145.41 228.01 151.72 168.06 202.83 300.12 357.93 367.74 221.16
87.87 31.6 20.52 12.59 21.99 24.65 46.02 22.7 22.93 29.11 32.56 33.16 63.29 65.41 52.82 56.34
56.29 9.89 0.8 1.28 1.38 3.68 5.86 11.49 8.99 8.4 6.82 4.69 16.65 18.34 11.79 16.8
100.9 53.03 4.67 2.65 13.47 17.06 21.94 18.03 22.45 30.04 23.9 17.91 32.24 25.48 25.41 40.62
12.51 0.85 0.17 0.0 0.08 0.39 1.7 0.73 0.69 0.86 0.48 0.11 1.78 1.67 0.37 1.7
83.99 26.68 23.75 22.9 15.23 23.88 36.0 36.82 34.6 33.35 24.61 21.48 43.93 31.51 30.37 56.83
5.52 1.04 0.0 0.0 0.43 0.0 0.91 2.17 2.33 0.0 1.27 1.75 13.8 12.2 3.01 29.56
618.53 179.34 75.26 45.16 82.29 86.69 247.27 138.98 200.58 173.64 199.21 162.59 274.79 271.31 338.49 300.52
70.5 28.78 16.62 9.78 15.42 20.35 30.56 21.57 12.95 13.26 25.1 18.45 63.16 45.86 43.18 66.08
103.85 28.0 9.68 10.65 11.33 14.13 29.98 26.29 23.66 19.84 16.36 14.03 50.92 45.38 42.9 49.14
143.79 2.75 1.48 0.81 1.53 1.0 27.65 48.9 30.06 21.41 0.54 3.08 54.57 93.0 69.46 63.69
157.55 13.53 8.11 5.57 9.14 10.31 22.51 16.28 27.12 32.7 33.53 21.82 29.98 25.65 26.7 39.37
342.9 153.73 58.5 54.19 44.3 49.09 109.0 67.65 70.68 50.4 65.79 69.14 100.37 100.39 101.39 101.73
42.84 13.72 8.79 9.61 12.05 12.91 18.71 16.19 14.62 15.06 14.12 10.21 32.47 27.68 29.1 29.7
669.22 36.59 77.78 73.26 73.82 98.42 167.66 123.42 6.69 5.96 84.33 85.43 389.47 450.88 196.01 413.93
18.0 0.47 0.15 0.0 0.0 0.14 0.27 3.54 3.2 4.13 0.24 0.0 0.27 0.38 0.0 0.25
13.42 1.18 0.87 0.91 0.23 0.38 0.11 0.34 1.7 2.24 0.57 0.13 1.02 0.9 0.22 1.07
24.2 5.16 0.77 1.03 0.9 1.57 4.17 4.0 1.09 1.14 4.0 2.71 11.32 6.59 6.09 15.78
31.31 1.56 1.53 1.19 2.59 1.74 4.82 5.37 0.0 0.0 0.75 1.72 12.18 11.33 8.07 16.33
373.15 86.57 57.88 49.19 70.62 65.43 109.99 76.8 41.68 44.65 63.58 71.52 267.47 268.76 257.28 334.31
67.96 8.8 1.96 1.25 1.68 1.88 0.2 0.78 19.06 7.69 7.37 5.22 0.99 1.49 1.08 0.4
146.07 74.29 15.65 16.22 9.21 15.09 57.62 33.19 39.19 30.63 43.11 44.28 117.09 111.45 109.88 90.6
194.95 71.86 22.71 20.7 25.35 24.29 77.4 43.93 55.69 45.31 54.5 60.88 65.73 89.11 94.6 73.87
974.28 311.09 129.25 128.13 145.2 179.65 212.34 518.4 240.66 226.77 209.13 269.68 45.6 57.51 98.4 103.77
64.03 10.09 2.5 1.3 3.59 9.47 15.31 6.86 0.6 0.4 4.51 5.08 28.49 31.37 19.8 22.07
30.16 8.74 0.45 0.38 0.33 1.37 1.24 8.19 9.71 7.23 3.92 2.46 8.69 4.73 0.0 4.84
54.31 31.54 21.06 16.02 21.36 20.17 30.42 19.29 28.47 23.37 16.96 17.81 36.7 27.96 25.95 38.62
123.53 64.85 27.4 28.32 33.01 28.49 66.05 29.97 41.29 40.02 45.28 46.05 30.87 41.04 39.12 51.32
20.86 2.15 1.89 0.98 2.99 3.14 1.98 2.96 0.11 0.35 2.4 3.08 33.88 28.14 19.27 28.91
124.44 66.65 36.78 29.32 36.75 35.51 58.85 42.85 49.6 42.53 46.5 47.12 81.56 77.48 60.94 90.71
142.1 63.36 10.0 11.09 19.78 22.77 51.39 29.41 28.74 26.74 44.38 40.84 30.45 25.53 33.04 29.96
6.42 3.29 0.23 0.0 0.5 0.53 1.01 2.21 1.74 0.97 0.37 0.35 19.23 11.93 6.19 20.28
271.88 132.28 85.7 42.13 73.32 82.06 99.84 39.55 78.81 121.46 89.5 99.34 229.62 254.29 274.08 255.99
223.76 24.41 11.04 8.48 20.5 23.97 52.68 25.77 20.21 23.77 28.97 28.78 64.45 56.7 70.67 64.8
1.65 0.0 0.0 0.0 0.08 0.07 0.27 0.24 0.0 0.0 0.12 0.22 0.81 0.88 0.53 2.72
12.34 0.17 0.28 0.79 0.33 1.94 2.21 4.23 4.37 2.32 2.72 1.98 17.05 10.58 4.54 13.1
19.91 11.63 6.06 4.63 7.86 7.95 10.3 6.48 10.03 9.49 7.23 7.46 15.45 16.61 18.88 16.48
185.58 109.53 30.38 32.33 35.54 63.49 69.02 35.74 62.2 85.72 75.37 73.79 133.96 150.92 143.4 144.66
16.48 6.69 3.01 1.53 4.15 2.77 6.1 4.09 3.99 3.52 5.1 4.82 14.91 9.93 9.89 16.38
88.51 35.17 14.12 8.49 16.22 14.74 38.09 27.27 20.69 14.48 28.94 27.08 66.31 55.39 46.76 74.49
70.23 6.1 0.28 0.36 0.43 0.11 2.82 3.92 6.25 12.83 3.56 3.22 4.27 4.2 2.1 4.31
24.59 6.03 0.6 0.21 0.77 0.59 7.4 4.52 5.88 2.21 3.14 1.05 13.67 10.6 5.61 12.36
89.88 29.53 8.87 3.87 8.31 7.04 32.69 15.57 23.4 26.89 29.6 35.66 22.19 31.96 43.62 30.35
141.51 56.19 10.58 6.78 9.98 17.7 39.82 26.88 45.71 42.16 40.95 56.07 98.97 117.99 102.27 133.93
7.87 2.73 0.19 0.1 0.15 0.21 0.48 0.17 1.74 1.43 0.86 0.32 0.21 0.24 0.61 0.38
0.63 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.16 0.0 0.0 0.0 0.0 0.0 0.0
1.38 0.1 0.0 0.11 0.0 0.0 0.0 0.0 0.48 0.32 0.0 0.0 0.0 0.0 0.0 0.0
19.22 5.76 2.9 1.75 3.71 6.81 8.16 5.39 5.48 4.32 5.99 4.31 23.64 20.64 19.24 27.58
77.97 20.62 7.99 12.02 9.89 12.95 25.23 8.56 19.55 21.81 17.83 15.66 27.62 19.82 15.92 34.12
291.59 118.35 44.15 28.62 30.2 41.59 109.76 70.1 64.25 51.4 83.79 101.1 128.04 178.65 211.21 128.31
1.3 0.24 0.0 0.0 0.0 0.13 0.0 0.55 0.0 0.0 0.28 0.07 68.56 0.31 0.0 80.46
235.71 125.48 63.55 81.78 79.63 85.1 98.95 45.15 126.81 105.61 113.81 127.03 62.08 75.3 88.17 74.16
13.46 1.21 0.56 0.58 1.38 1.06 2.68 1.84 0.11 0.22 2.03 1.14 9.05 7.44 6.47 7.05
80.21 36.11 18.53 17.8 17.81 28.56 44.0 19.49 39.24 24.52 32.02 33.48 58.63 67.18 52.67 59.17
153.21 21.08 7.99 8.27 9.8 34.84 34.28 46.26 17.26 12.95 37.55 29.5 57.65 52.41 18.86 52.19
22.73 6.42 2.35 1.47 3.22 5.7 4.75 8.71 7.69 3.53 3.91 4.83 23.65 15.67 12.27 20.82
79.89 22.83 11.33 11.93 9.92 13.1 6.35 6.26 18.34 20.26 12.27 4.36 15.12 21.37 19.49 17.46
51.05 17.91 6.97 4.29 7.35 7.73 8.47 13.51 15.09 14.95 10.99 10.65 36.06 37.06 42.02 37.22
26.84 6.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 6.51 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)