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Heatmap: (1/76)Cluster_332 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.67 -0.2 -2.04 -2.94 -1.02 -0.69 0.65 -0.61 -0.84 -0.29 0.31 -0.2 0.38 0.96 0.91 0.28
0.25 -0.33 -1.24 -1.18 -1.01 -0.5 0.58 -0.23 -0.06 0.09 0.38 0.27 0.41 0.13 0.03 0.71
0.38 0.04 -0.95 -1.03 -0.64 -0.28 0.47 0.01 -0.06 0.19 0.33 0.32 0.43 -0.14 0.03 -0.08
0.63 -0.08 -1.4 -1.63 -0.92 -0.35 -0.01 -1.21 -0.4 -0.31 0.23 -0.09 0.74 0.79 0.43 0.72
0.63 -0.84 -1.08 -0.91 -0.91 -0.84 0.88 -0.47 0.03 0.27 0.56 0.3 0.22 0.23 -0.29 0.22
-0.16 -0.28 -2.65 -1.97 -1.1 -1.33 0.37 -1.23 -0.32 -0.39 -0.02 -1.04 0.82 1.22 0.79 1.28
0.25 -0.43 -2.42 -2.34 -2.09 -1.26 0.5 0.04 -0.07 -0.57 0.8 0.63 0.81 0.62 0.17 0.33
0.39 0.13 -1.21 -1.4 -0.65 -0.2 0.71 -0.56 -0.08 -0.19 0.23 -0.27 0.21 0.21 0.12 0.8
0.39 0.19 -0.57 -0.69 -0.7 -0.1 0.33 -0.07 -0.02 0.1 -0.04 0.16 -0.14 0.31 0.09 0.19
0.79 -0.52 -1.26 -2.13 -0.77 -0.92 -0.09 -0.88 -0.2 -0.5 0.29 -0.51 0.64 0.86 0.88 0.69
0.67 0.39 -0.84 -1.39 -0.39 -0.09 0.64 -0.35 0.19 0.17 0.17 0.11 -0.34 -0.2 0.06 -0.1
0.2 -2.66 -1.88 -2.23 -1.14 -0.63 0.36 0.1 0.65 -0.85 0.62 -0.94 1.21 0.56 0.11 0.77
1.25 0.28 -0.91 -0.99 -0.55 -0.01 0.28 -0.5 -0.2 -0.15 0.76 0.53 -0.33 -0.66 -0.96 -0.14
0.2 0.32 -0.72 -0.57 -0.08 -0.06 0.82 0.06 0.1 0.31 0.66 0.67 -0.85 -1.2 -1.05 -0.62
0.21 -1.38 -1.57 -2.08 -0.94 -0.7 0.36 -0.26 0.07 -0.02 0.68 0.36 0.41 0.58 0.67 0.37
1.21 -0.3 -1.92 -2.1 -2.14 -2.23 1.02 -0.29 -0.35 0.12 0.82 0.82 0.07 -0.11 -0.86 0.24
0.41 0.14 -0.58 -0.84 -0.56 -0.28 0.49 -0.28 -0.09 -0.05 0.16 0.27 -0.16 0.19 0.65 -0.39
0.28 0.26 -0.89 -0.17 0.11 0.21 0.68 -0.31 0.16 0.45 0.79 0.78 -1.4 -1.99 -1.34 -0.83
-0.29 -0.62 -4.01 -5.42 -1.45 -1.62 0.06 -0.47 -1.04 -0.71 0.56 0.01 1.37 0.93 -0.05 1.56
0.38 -1.17 -1.62 -1.51 -1.11 -0.96 0.33 0.2 -0.19 0.37 0.37 -0.26 0.69 0.44 0.41 0.68
1.06 0.99 -5.31 -9.61 -0.49 -0.0 0.76 -0.44 -0.04 -0.04 0.32 0.02 -0.04 -0.46 -0.51 0.19
0.23 0.14 -1.19 -0.91 -0.04 -0.02 1.05 -0.09 0.31 0.25 1.16 0.49 -1.15 -1.44 -1.98 -0.65
-0.23 0.11 -1.55 -1.47 -0.9 -0.35 0.79 -1.79 -0.98 -0.16 0.43 0.69 0.85 -0.35 -1.1 1.39
0.36 -0.22 -1.25 -1.46 -0.29 -0.63 0.6 0.07 0.44 -0.11 0.69 0.09 0.45 0.03 -1.09 0.3
1.11 0.04 -0.92 -1.29 -0.79 -0.38 0.38 -0.32 -0.06 -0.47 0.6 0.06 0.03 0.1 0.17 -0.05
0.56 -0.82 -1.34 -1.8 -1.08 -0.92 0.75 -0.09 0.0 -0.12 0.56 0.58 0.45 0.18 0.06 0.29
0.33 0.06 -1.1 -1.09 -0.39 -0.5 0.18 -0.71 -0.32 -0.05 0.38 0.22 0.61 0.33 0.21 0.46
0.28 -0.02 -1.19 -1.18 -1.5 -0.32 0.72 -1.0 -0.46 -0.07 0.53 -0.23 0.51 0.34 0.13 0.89
0.29 -0.09 -1.2 -1.37 -0.73 -0.36 0.38 -0.51 -0.27 -0.68 -0.04 0.13 0.53 0.83 0.63 0.43
-1.21 -2.34 -3.63 -4.05 -2.93 -2.35 -1.4 -1.54 -1.77 -1.69 -1.36 -1.61 1.71 1.84 1.59 1.59
0.21 -0.92 -1.01 -1.22 -0.28 -0.56 0.3 0.11 0.25 -0.13 0.42 -0.01 0.48 0.28 -0.0 0.62
0.88 0.1 -1.16 -1.2 -0.19 -0.19 0.43 -0.09 0.28 -0.03 0.66 0.07 0.05 -0.57 -1.02 0.18
0.04 -1.25 -1.78 -2.12 -1.24 -0.94 0.27 -0.28 0.12 -0.3 0.38 0.0 0.9 0.73 0.66 0.81
0.29 0.18 -1.18 -1.05 -0.55 -0.32 0.1 -0.2 -0.03 0.05 0.18 0.04 0.44 0.28 -0.17 0.73
0.47 0.13 -1.38 -1.31 -0.63 -0.49 0.5 -0.37 -0.22 -0.59 -0.01 0.02 0.58 0.45 0.41 0.55
0.83 0.44 -0.84 -0.54 -0.34 -0.23 0.72 -0.44 -0.32 -0.34 0.24 0.23 -0.13 -0.08 -0.25 -0.08
0.87 0.08 -0.9 -1.1 -0.29 -0.47 0.44 -0.29 0.02 -0.18 0.54 0.21 -0.15 -0.1 -0.36 0.36
0.43 0.25 -0.72 -1.03 -0.64 -0.15 0.2 -0.45 -0.22 -0.15 -0.01 -0.07 0.35 0.33 0.53 0.33
0.31 -0.68 -1.19 -1.31 -0.7 -0.27 0.51 -0.12 0.16 0.02 0.36 0.01 0.33 0.39 0.39 0.28
0.76 -0.09 -2.96 -2.97 -1.6 -1.56 0.01 -0.42 -0.68 -1.13 0.29 -0.54 1.04 0.96 0.95 0.81
0.6 0.27 -0.62 -0.87 -0.18 -0.16 0.64 -0.12 0.4 0.34 0.2 0.12 -0.89 -0.44 -0.22 -0.23
1.03 0.05 -1.35 -1.29 -0.67 -1.12 0.81 -0.05 -0.08 -0.46 0.89 0.42 0.01 -0.66 -0.65 0.24
0.39 0.19 -1.71 -1.7 -0.98 -0.87 0.62 -0.12 -0.17 0.37 0.6 0.34 0.23 -0.01 0.32 0.08
-0.17 -0.08 -0.67 -0.78 -0.29 -0.08 0.2 -0.3 -0.19 -0.19 0.43 0.58 0.42 -0.06 -0.03 0.43
0.32 -0.11 -1.75 -1.83 -0.72 -0.54 0.14 -0.45 0.03 -0.28 0.15 0.01 0.9 0.51 0.51 0.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.