Heatmap: Cluster_342 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G227601.1	-	-	-	-	-	-	-	-	-	-	-	-	-	1.7	-	3.67
Sobic.001G261404.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G284700.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G331650.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G406400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G420600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G181500.1	-	-	-	-	-	-	-	-	-	-	-	-	2.7	1.15	1.8	1.93
Sobic.002G277500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.002G419350.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G025500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.003G160433.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G175866.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G336550.1	-	-	-	-	-	-	-	-	-	-	-	-	2.85	1.99	1.55	0.93
Sobic.003G400266.1	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-	-
Sobic.004G052700.2	-	-	-	-	-	-	-	-	-	-	-	-	-	1.62	3.69	-
Sobic.004G084800.1	-	-	-	-	-	-	-	-	-	-	-	-	0.26	2.71	1.65	2.36
Sobic.004G120200.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G120266.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.004G230650.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G285650.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G301650.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G109800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G207900.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G099800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G205100.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G181050.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G062150.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G076000.1	-	-	-	-	-	-	-	-	-	-	-	-	2.51	1.42	0.55	2.62
Sobic.009G087420.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G136950.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G137600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0
Sobic.009G185601.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G195450.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G201444.1	-	-	-	-	-	-	-	-	-	-	-	-	3.12	1.4	1.24	1.21
Sobic.010G254401.1	-	-	-	-	-	-	-	-	-	-	-	-	2.66	1.57	2.64	-1.05
Sobic.K013100.1	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.