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Heatmap: Cluster_158 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.16 0.76 0.57 0.55 0.11 0.31 -0.58 -1.15 -0.91 -2.25 -0.2 0.23 -0.41 0.09 -1.16 -0.63
0.39 -0.4 0.81 0.62 0.8 0.45 0.24 -0.64 -1.2 -1.16 0.34 0.38 -1.03 -0.66 -0.97 -0.68
0.43 -2.45 1.59 0.9 0.41 1.0 -1.0 -2.91 -1.7 -2.59 0.27 0.11 -0.15 -0.48 -1.36 -0.2
0.41 -0.72 0.62 1.26 0.26 0.64 -0.07 -1.1 -1.97 -3.7 0.6 0.27 -0.26 -0.47 -0.82 -0.37
0.17 0.43 0.9 1.02 0.78 0.57 0.5 -1.26 -1.59 -1.41 -0.32 -0.28 -0.6 -1.38 -1.6 -0.16
0.08 -0.15 -0.26 -0.03 0.52 -0.43 -0.87 -0.64 -0.86 -1.43 -0.46 -0.25 0.74 0.91 0.36 0.62
0.39 -0.68 -0.73 -0.44 0.19 -0.58 0.26 -1.64 -1.39 -2.02 -0.89 -0.98 0.53 1.19 0.9 1.09
1.74 -0.84 0.11 -0.15 -0.47 -0.14 -0.52 -1.37 -5.71 -4.87 0.15 0.73 0.44 0.31 -0.73 0.46
2.43 -3.35 -0.35 -0.59 0.39 1.43 -0.65 0.4 -5.05 -6.73 0.5 0.7 - - - -
0.57 -2.77 0.0 0.41 -0.07 0.35 -0.14 -0.45 -1.92 -1.49 0.01 -0.12 0.57 0.27 0.39 0.68
1.3 -1.18 0.34 0.28 0.54 0.05 -0.0 -0.42 -1.51 0.15 0.67 0.19 -0.63 -1.1 -1.81 -0.36
-1.09 - 0.13 -0.84 - -0.62 - - - - - - 2.04 2.2 - 2.18
1.01 -0.96 0.97 1.32 0.2 0.37 0.15 -1.02 -2.08 -2.13 0.71 0.38 -1.19 -1.64 -1.47 -1.15
-3.52 -3.66 -3.57 -4.04 - -4.09 - - -5.79 - -4.7 -3.48 2.16 1.44 1.31 2.54
0.38 0.2 0.33 0.35 0.06 0.38 -0.15 -0.73 -0.13 -0.51 0.03 0.22 -0.18 -0.53 -0.41 0.05
-4.59 -4.89 -3.6 -2.72 -4.75 -4.51 -3.96 -5.37 -7.22 -5.16 -7.12 - 1.51 2.19 2.32 1.62
0.92 -0.11 0.49 0.57 -0.0 0.37 0.1 -0.82 -0.17 -0.01 0.38 -0.38 -0.42 -0.94 -1.57 -0.29
1.49 -0.75 0.19 0.04 0.32 0.54 -0.39 -0.84 -1.63 -1.39 0.61 0.66 -0.62 -0.5 -0.84 -0.57
1.13 0.44 0.54 0.55 0.71 0.33 -0.39 -1.11 -1.33 -0.8 0.47 0.44 -1.34 -1.56 -1.31 -0.83
0.92 -3.45 0.7 1.27 0.29 0.15 -1.42 -1.37 -8.1 -6.04 -2.83 -1.98 0.85 0.61 0.89 0.37
1.23 0.47 1.23 1.23 0.27 -0.08 -0.64 -1.13 -1.64 -1.33 -0.49 -0.21 -1.1 -1.15 -1.48 -0.39
0.1 -2.5 0.47 -0.0 -0.28 -0.04 -0.68 -0.93 -1.44 -1.99 -0.48 -0.55 0.98 1.04 0.54 0.94
0.65 -1.55 -0.06 -0.39 -0.35 -0.35 -0.06 -0.7 -1.05 -1.11 -0.1 -0.47 0.92 0.43 0.54 0.94
1.52 -1.3 0.12 0.12 0.32 1.22 -0.68 -0.13 -3.32 -2.96 0.41 0.31 -0.94 -0.82 -0.84 -0.01
0.45 0.0 -0.17 -0.06 0.43 0.18 0.37 -0.31 -0.34 -1.71 -0.2 -1.66 0.79 0.09 -0.33 0.41
0.39 0.01 0.43 0.41 0.46 0.41 0.11 -0.69 -1.3 -0.97 -0.2 0.15 -0.04 -0.48 -0.21 0.21
0.59 -2.23 0.33 1.36 -0.13 0.7 -0.62 -1.1 -4.43 -4.36 -0.1 -1.63 0.79 0.62 -0.18 0.39
0.72 0.15 0.7 0.85 0.69 0.53 -0.54 -1.09 -0.99 -1.12 0.24 0.18 -0.9 -0.88 -0.65 -0.71
0.43 -0.77 0.28 0.32 0.08 0.05 -0.19 -0.76 -0.68 -0.17 -0.21 -0.42 0.08 0.16 0.38 0.52
1.09 -3.93 0.26 0.53 0.43 -0.12 -0.43 -0.48 -1.91 -1.93 0.31 -0.41 0.63 0.54 -0.6 0.33
1.58 -3.36 1.1 0.71 0.06 0.03 0.32 -1.01 -1.72 -2.27 0.65 0.07 -0.91 -0.52 -2.0 -0.54
1.52 -1.8 1.12 1.46 0.41 -0.07 -0.15 -0.54 -1.62 -1.81 0.4 0.04 -2.04 -1.7 -1.78 -2.05
0.54 -1.99 1.0 1.06 -0.0 0.27 0.19 -0.85 -1.93 -2.36 1.07 0.14 -0.12 -0.82 -1.33 -0.37
0.25 -3.15 0.02 0.42 0.31 0.19 -0.89 -1.63 -2.32 -3.02 -0.07 -0.45 1.16 0.94 -1.12 1.32
0.44 -0.19 0.41 1.11 0.21 0.3 0.6 -1.67 -6.26 -7.66 0.53 0.34 -0.13 -0.2 -0.87 0.02
0.68 -0.6 0.58 0.97 0.44 0.43 0.27 -0.31 -0.46 -0.71 0.32 -0.24 -0.81 -0.92 -1.35 -0.64
- - 0.76 2.08 - 2.3 - - - - 1.41 1.31 - - - -
0.05 -2.78 -0.02 -0.75 -0.3 0.18 -1.04 -0.97 -1.97 - -0.29 -0.98 1.95 1.08 -0.07 0.83
0.54 -0.43 0.95 0.71 0.55 0.59 -0.03 -0.53 -0.63 -0.4 0.15 0.18 -1.01 -1.65 -0.92 -0.74
2.07 0.59 1.04 1.29 0.7 -0.18 -0.76 -2.0 -2.44 -1.87 -0.93 0.22 -4.65 -4.48 -3.52 -3.29
0.02 0.55 0.98 0.89 0.22 0.56 -0.04 -1.41 -1.39 -1.54 0.38 0.29 -0.79 -0.62 -1.01 -0.46
0.11 -4.01 0.25 0.77 0.12 0.25 0.45 -0.27 -2.57 -2.07 -0.34 -0.89 0.97 0.41 -0.48 0.81
0.39 -0.21 0.33 0.73 -0.19 0.73 0.49 -0.83 -0.89 -0.85 0.61 0.53 -0.93 -1.01 -0.57 -0.65
0.55 - 1.35 2.42 - 0.97 1.31 -0.7 -0.4 - -0.29 - - - - -
1.23 -1.47 1.11 1.03 0.98 0.75 -0.39 -1.27 -1.25 -0.72 0.72 0.46 -6.5 -5.59 -2.71 -5.62
0.74 -0.99 0.39 0.47 0.51 0.53 -0.05 -0.64 -1.14 -1.6 0.26 0.19 0.19 -0.35 -0.44 -0.19
0.55 -1.42 0.59 0.9 0.84 0.36 -0.17 -1.51 -4.29 -6.43 0.96 0.52 -0.02 -0.42 -1.42 -0.11
0.81 -0.82 0.69 0.85 0.79 0.95 0.1 -0.62 -1.5 -1.98 0.52 -0.26 -0.57 -1.23 -1.53 -0.84
1.06 -0.35 -0.33 -1.91 0.1 -0.11 -0.14 -0.76 -1.87 -0.81 -0.48 0.12 1.13 0.75 -1.35 0.72
-0.15 -1.04 0.67 0.61 0.58 0.47 -0.03 -0.38 -1.14 -0.48 0.34 0.16 -0.01 -0.63 -0.63 0.05
1.39 -1.94 -0.88 -1.8 -1.09 0.15 -0.8 -1.21 -2.57 -2.92 -0.67 0.18 1.24 0.86 0.76 0.83
0.04 -0.91 -0.05 0.36 -0.06 0.1 0.27 -0.17 -0.72 -0.86 -0.25 -0.2 0.41 0.51 0.38 0.19
-0.64 -2.25 -0.04 1.0 -0.68 -0.36 -3.07 -2.8 - -1.69 - -0.75 1.11 0.43 1.5 1.72
0.62 -2.97 -0.6 0.55 0.26 0.31 0.18 -0.33 -4.03 -2.74 -1.27 -0.68 1.03 0.3 0.15 1.15
1.75 0.51 0.85 1.04 0.77 0.18 -0.84 -0.67 -0.82 -0.14 -0.48 -0.45 -2.91 -3.65 -5.57 -2.71
0.39 -3.65 -0.15 -0.37 -1.08 -0.83 -2.73 -2.46 -3.21 -4.15 -4.12 -2.22 1.48 1.66 1.46 1.29
0.5 0.51 0.67 1.07 0.31 0.31 -0.6 -1.27 -0.51 -0.6 -0.28 0.02 -0.67 -0.74 -0.8 -0.13
0.63 -0.13 0.68 0.85 0.45 0.84 0.46 -1.14 -1.32 -2.58 0.5 0.51 -1.13 -1.14 -1.58 -0.96
1.59 -1.71 1.17 1.49 0.82 0.75 -1.09 -2.82 -3.68 -4.05 -0.42 -1.25 -0.17 -1.02 -1.22 -1.16
-0.14 -1.31 0.55 0.67 0.53 0.09 0.11 -1.19 -3.66 -3.49 -0.98 -0.35 0.73 0.51 0.53 0.71
1.12 -0.61 0.24 2.2 -0.16 1.37 -1.55 -1.13 -2.87 -2.81 -1.77 -1.88 -0.55 -0.65 - -0.09
0.94 -2.24 0.48 0.24 0.09 -0.88 -1.03 -0.8 -5.96 -6.42 -2.56 -0.72 0.87 0.88 0.95 1.15
0.64 0.43 0.18 -0.02 0.69 0.31 0.43 -1.43 -0.97 -0.85 -0.13 0.19 -0.51 -0.15 -0.18 -0.31
0.02 -0.63 0.4 1.41 0.31 -0.11 0.11 -0.34 -2.73 -4.4 -0.05 -0.7 0.26 0.02 -1.13 0.91
0.73 -1.24 0.82 1.38 0.18 0.04 -0.49 -0.63 -0.46 -1.01 -0.28 0.06 -0.43 -0.81 -0.95 0.16
-1.78 -4.12 -1.61 -2.45 -2.54 -2.7 -6.04 -2.74 - - - - 1.81 1.83 0.91 2.51
0.11 -0.32 0.45 0.48 0.39 -0.04 -0.03 -0.6 -4.15 -5.26 -1.2 -1.06 0.39 0.5 0.22 1.34
-0.11 -0.59 0.06 0.04 -0.85 0.06 -0.34 -0.93 -0.61 -0.67 -0.07 -0.1 0.75 0.11 -0.06 1.34
1.39 0.5 1.01 0.66 0.93 1.14 -2.45 -5.26 -2.22 -2.44 0.66 0.57 -3.65 -1.98 -2.19 -5.1
0.47 -0.52 0.34 0.81 0.27 0.07 0.37 -0.52 -1.55 -2.34 0.09 -0.09 0.22 0.09 -0.82 0.38
0.62 -0.2 0.3 0.23 -0.14 0.12 -0.85 -0.84 -0.63 -0.69 -0.13 -0.05 0.46 -0.09 -0.27 0.84
-0.34 -4.28 0.22 -2.11 -1.36 -0.82 -2.57 -3.44 - - -2.54 -2.48 0.87 1.47 2.8 -0.7
1.27 -3.48 0.12 0.92 0.63 0.39 0.93 -0.97 -5.66 -5.18 -1.37 -0.29 0.11 0.01 -0.22 0.09
1.23 0.13 0.24 0.48 0.58 0.39 0.63 -0.55 -0.85 -0.79 0.13 -0.22 -1.51 -1.36 -1.64 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.