1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_41 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - - -0.23 - - - - 2.71 2.7 - - 1.09 -
- - - - - - - - - - 2.91 3.08 - - - -
- - - - - - - - - - 3.32 2.58 - - - -
- -0.72 - - - - - - - - 2.72 2.44 - - 1.76 -
- - - - - - - - - - 3.05 2.95 - - - -
- 0.36 - - - - - - -0.87 - 3.03 2.58 - - - -
-6.35 -6.27 -3.64 -3.33 -3.61 -3.43 -1.4 -1.1 -1.07 -0.82 2.96 2.41 -2.57 -3.07 -2.49 -2.55
-5.31 -4.02 -1.99 -2.42 -0.88 -1.29 -8.0 - -2.6 -3.97 2.91 2.75 -6.38 -7.3 - -5.78
- -0.22 - -2.3 -0.92 -2.66 - - -2.05 -1.99 2.9 2.58 - -1.82 - -
- - - -0.09 -0.31 - - - - - 2.85 2.16 - - - 1.35
- -1.53 -2.06 - - -3.64 -3.35 -2.23 -3.02 -0.38 2.76 2.88 - - - -
- - - - - - - - - - 3.05 2.95 - - - -
- - - - - - - - - - -0.2 -0.44 2.05 1.82 0.89 2.28
- - - - -1.41 - - -0.41 - - 3.26 2.4 - - - -
- - - - -4.1 -1.66 - - - - 3.14 2.68 - - -1.34 -
- - - - - - - - - - 1.29 1.18 - - 3.5 -
- - - - - - - - - - 3.04 2.91 - -2.06 - -
- - -3.99 - - - - - - - 3.29 2.62 - - - -
- - - - - - - - - - 3.05 2.95 - - - -
-1.98 - - - - - -0.85 -2.25 - - 3.19 2.55 - - - -
- -0.91 -2.02 -3.69 -3.3 -4.06 -4.11 - - - 3.11 2.6 - - -2.13 -
- - - - - - - - - - 3.05 2.95 - - - -
- - - - - - - - - - 2.93 3.0 - - -1.28 -
- - - - - - - - - - 2.99 3.01 - - - -
- - - - -0.37 - - - - - 2.96 2.9 - - - -
- - - - - - - - - - 2.99 3.01 - - - -
- - - - - - - - - - 3.34 2.55 - - - -
- - - - - -0.97 - - - -0.28 2.85 2.9 - - - -
-4.04 -3.4 -4.88 -4.55 -5.02 -7.5 -3.75 -1.3 -3.19 -4.83 2.83 3.0 - - - -
-5.07 - -3.92 -6.06 -6.08 - - -6.96 - -6.56 3.25 2.67 - - - -
-7.73 -4.89 -0.31 -1.19 -1.15 -1.65 - - -1.52 -0.59 3.02 2.26 - - - -
- - - - - - - - - - 3.08 2.91 - - - -
- - - - - - - - - - 3.05 2.95 - - - -
- -1.78 -3.54 -1.32 -2.52 -3.21 -1.0 -6.69 - - 3.17 2.45 - - - -
- - - - - - - - - - 3.05 2.95 - - - -
- - - - - - - - - - 3.29 2.63 - - - -
- - -3.67 -3.78 -5.36 -2.25 -1.43 -6.07 -3.42 -1.21 3.07 2.65 - - - -
- - -2.57 -3.24 - - - - - - 3.15 2.78 - - - -
- - 0.44 - - - - - - - 3.11 2.59 - - - -
- - - - 0.09 - - - - - 2.95 2.85 - - - -
-11.52 - -2.32 -2.27 -2.96 -1.13 -0.27 -6.26 -3.62 -3.92 3.11 2.42 - - - -
- - - - - - - - - - 3.05 2.95 - - - -
- - -2.16 - -1.03 0.13 - -4.82 - - 2.83 2.73 - -1.35 - -
- - - - - 0.83 - - - - 3.13 2.44 - - - -
- - -2.1 -2.69 -1.63 -2.22 -5.94 -1.2 -0.58 -3.47 3.03 2.5 - - - -
-1.39 - - - - - - - - - 3.07 2.69 - - - -0.35
- - - -7.4 - - -9.01 0.01 - -8.66 3.19 2.55 - -8.53 - -7.56
-3.0 - - - - - - - -1.28 -2.24 2.91 2.96 - - - -
- - - - - - - - - - 3.05 2.94 - - - -
- - -0.07 - - - - -2.74 - - 3.2 2.51 - - - -
- - - - - - - - - - 2.87 3.12 - - - -
- - - -2.36 - - - - - -0.51 3.02 2.81 - - - -
-4.6 -3.1 -3.1 -3.76 -1.11 0.02 0.02 -2.5 -2.73 -2.28 2.88 2.3 -2.79 -3.78 -6.57 -3.21
- - -1.79 -2.45 -0.54 -3.41 - - - - 2.94 2.82 - - - -
- - - - - -1.95 - - - - 2.84 2.73 - - 0.97 -
- - - - - - - - - - 2.4 2.29 - 2.55 - -
- - - - - - - - - - 3.06 2.94 - - - -
- - - - - - - - - - 3.06 2.94 - - - -
- - - - - - - - - - 2.92 3.08 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.