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Heatmap: Cluster_330 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-2.24 0.71 -1.41 -0.03 -0.89 -1.02 1.27 -0.02 -0.27 0.52 1.43 0.46 -0.96 -1.04 -1.46 -0.59
-1.77 2.45 -1.39 -0.84 -0.32 0.35 0.98 -0.18 1.46 0.17 -2.05 -2.04 -5.94 -8.62 -6.55 -6.91
-0.46 0.66 -1.12 -0.8 -0.99 0.65 0.34 -0.08 0.92 0.55 0.55 0.52 -1.0 -1.22 -1.03 -0.5
-0.78 -0.2 -0.85 -0.58 -0.83 -0.6 0.22 0.48 -0.07 -0.0 1.21 0.48 0.2 -0.33 -0.53 0.31
-0.06 0.54 -0.45 -0.24 -0.04 0.11 0.48 -0.83 0.79 0.52 0.33 0.72 -0.99 -1.53 -1.37 -0.52
-3.49 1.3 -1.87 -2.85 -1.48 0.7 -0.54 -0.82 1.46 0.05 1.64 0.41 -0.7 -2.38 - -0.41
-0.16 0.64 -0.63 -0.12 0.04 0.21 0.36 -0.35 0.48 0.36 0.11 0.34 -0.58 -0.48 -1.15 -0.21
-0.36 0.93 -0.52 -0.68 0.08 -0.25 0.61 0.07 0.67 0.11 -0.02 0.55 -0.78 -0.75 -0.91 -0.5
-0.45 0.78 -0.24 -0.18 0.26 0.2 0.55 0.34 0.12 0.13 0.99 0.48 -1.47 -1.91 -3.56 -1.1
- 0.22 -3.57 -3.82 -1.11 0.16 -1.07 -1.19 1.14 1.38 0.26 0.99 0.3 -0.25 0.06 0.1
-1.26 0.4 -1.3 -1.28 -0.04 -0.06 0.88 0.71 -0.24 0.37 1.82 0.64 -1.78 -2.13 -3.13 -2.46
0.04 0.44 -0.4 -0.25 -0.21 0.27 0.4 0.09 0.58 0.56 0.24 0.42 -1.26 -0.86 -0.69 -1.02
0.12 1.05 -1.58 -1.42 -0.43 -0.71 0.79 -0.91 0.02 0.27 0.3 0.93 -0.35 -0.38 -0.78 0.05
-0.08 -0.62 -0.46 -0.47 -0.07 -0.05 0.88 -0.19 0.64 0.9 0.66 0.68 -1.1 -1.67 -1.74 -0.67
-0.04 1.2 -6.28 -7.74 -0.32 -0.28 0.74 -0.31 0.61 0.75 0.69 0.63 -0.84 -0.65 -1.48 -0.54
0.26 0.87 -0.16 -0.33 0.06 -0.18 0.74 -0.94 0.23 -0.04 0.18 0.71 -0.86 -0.98 -0.59 -0.9
-0.24 0.64 -0.64 -0.43 -0.0 0.06 0.59 -0.08 0.41 0.21 0.48 0.27 -0.54 -1.08 -0.67 -0.24
-1.25 1.41 -3.57 -0.58 -0.08 -0.15 1.46 0.33 0.34 -1.08 -0.23 -0.94 -0.3 0.14 -1.27 -0.2
-0.09 0.51 -1.49 -0.98 -1.04 0.51 -0.01 -0.31 0.22 -0.17 0.15 -0.21 0.51 0.14 -0.18 0.7
-0.29 0.92 -1.06 -1.97 0.02 -0.64 0.72 0.14 0.27 0.11 -0.26 -0.83 0.54 0.19 0.04 -0.23
-0.63 0.18 -0.96 -0.61 -0.6 -0.02 -0.38 -0.63 0.2 -0.13 0.08 -0.08 0.51 0.42 0.67 0.64
-5.11 0.85 -1.81 -0.74 -0.3 0.56 1.08 -0.86 1.03 1.27 0.98 0.92 -7.17 -6.68 -6.19 -8.29
0.07 0.19 -0.58 -0.68 -0.11 -0.25 0.25 -0.07 0.69 0.12 -0.07 -0.16 0.12 -0.1 0.06 -0.01
-2.04 0.06 -0.55 -0.4 0.19 0.49 1.13 -0.05 0.48 0.7 1.03 0.97 -2.68 -2.86 -3.88 -2.42
0.49 0.18 -0.44 -0.07 0.22 0.02 0.6 -0.42 0.69 0.35 -0.01 -0.06 -0.84 -0.74 -0.56 -0.62
-0.18 0.51 -0.8 -0.52 -0.12 -0.68 0.24 -0.49 0.15 -0.27 -0.53 -0.47 0.62 0.26 0.22 0.79
-1.16 -0.1 -0.85 -0.27 0.31 0.4 1.05 -0.3 0.71 1.21 0.9 0.77 -4.66 -4.27 -2.84 -4.18
-0.51 0.93 -2.43 -2.5 -1.23 -0.37 -0.18 0.17 0.79 -1.07 0.13 -0.3 0.81 1.21 -0.52 -0.09
-2.1 0.25 -1.25 -0.36 0.11 0.39 0.89 -1.23 1.13 0.6 1.22 0.79 -1.97 -2.14 -3.29 -1.47
-1.48 0.65 -1.08 -0.44 -0.29 -0.1 1.41 -1.39 0.41 1.1 1.01 0.55 -1.8 -1.67 -2.2 -1.73
-0.07 0.95 -1.46 -1.81 -0.63 -0.55 0.53 0.49 0.11 0.1 -0.08 -0.08 0.12 0.2 0.27 -0.3
-0.39 0.3 -0.9 -1.29 -0.32 -0.3 0.07 -0.02 0.31 0.14 0.12 0.28 0.37 0.13 0.11 0.38
0.18 0.26 -0.33 -0.64 0.15 0.03 0.58 -0.06 0.59 -0.03 0.29 0.62 -0.8 -0.75 -0.48 -0.98
-1.68 0.6 -0.74 -0.75 0.11 0.17 0.52 0.29 0.28 0.67 1.19 0.83 -1.51 -1.87 -2.54 -1.11
-0.13 0.96 -0.81 -0.74 0.05 0.05 0.36 -0.16 0.96 0.35 0.28 0.09 -0.82 -0.78 -1.18 -0.64
-1.46 1.32 -1.54 -1.79 -1.0 0.43 0.02 0.71 1.37 0.89 0.63 0.81 -3.79 -3.88 -4.58 -3.19
-0.59 0.45 -0.69 -0.64 -0.02 -0.09 -0.08 0.13 -1.0 0.41 0.83 0.81 -0.02 -0.27 -0.97 0.08
-0.12 -0.15 -0.72 -0.5 -0.24 -0.31 -0.06 -0.21 0.14 0.24 0.03 0.26 0.22 0.21 0.08 0.58
-0.26 1.38 -1.37 -1.38 -1.14 0.32 0.78 -0.22 0.82 -0.06 -0.29 -0.02 -0.28 -0.45 -1.6 0.13
-0.12 -0.14 -0.42 -0.85 -0.06 -0.34 -0.13 -0.66 0.29 0.46 -0.11 0.33 0.25 -0.09 0.06 0.69
-0.15 0.7 -0.7 -0.49 0.2 0.02 0.53 -0.14 0.32 -0.15 0.4 0.74 -0.53 -0.74 -1.16 -0.39
-0.85 1.36 -2.1 -1.88 -0.04 -1.06 0.8 0.18 0.59 0.77 -0.0 -0.21 0.41 -0.65 -2.79 -0.24
- 1.46 -0.29 - -0.17 - 1.03 0.05 0.29 - - 0.27 - - 2.59 -
-0.83 0.15 -0.49 -0.04 0.03 0.46 0.26 -0.28 0.81 0.91 0.64 0.69 -1.61 -1.55 -1.45 -1.38
-1.05 0.41 - -1.44 -1.66 - 0.25 -0.7 -0.19 -0.55 -1.1 - 0.71 1.73 1.69 0.59
-1.15 0.56 -2.55 -3.55 -2.23 -0.75 -0.62 -1.12 -0.04 -1.38 -1.3 -1.34 1.44 1.61 0.46 1.37
- 1.43 -2.93 - -0.33 -0.8 1.16 -1.41 -0.78 1.51 0.82 0.72 -0.01 -2.11 - 0.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.