Heatmap: Cluster_386 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- 3.98 - - - - -2.3 - - - - - - - - -
- 3.95 - - - -3.35 -2.4 - - - - - - -4.08 -2.01 -
- 3.98 - - - - -2.23 - - - - - - - - -
- 3.98 -5.91 -6.58 - - -3.05 -7.53 -6.34 - -5.24 - - - - -
- 3.99 - - - - -3.64 - - - - - - - - -
- 3.82 -7.22 -5.3 -5.5 -4.26 -3.5 -5.34 - - -4.24 -3.66 -0.72 -1.65 -2.74 -1.18
-8.17 3.57 -8.97 - - -5.84 -4.6 -4.95 - - -8.31 -8.41 -0.23 -1.08 -2.18 1.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.