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Heatmap: Cluster_273 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.38 -0.18 -0.69 -0.49 -0.61 0.14 0.54 -0.41 0.5 0.53 1.05 0.6 -0.46 -0.63 -0.79 -0.63
-0.17 -0.29 -1.06 -0.98 -0.13 -1.04 1.42 1.24 0.14 0.18 0.72 1.24 -3.04 -3.59 -3.82 -1.52
-2.16 -3.86 -0.82 -0.45 -0.45 -0.17 0.91 -0.04 1.45 1.18 1.53 0.69 -3.06 -3.15 -3.94 -2.83
-0.41 -0.2 -1.55 -1.35 -0.68 -0.53 1.32 -0.23 1.05 1.2 0.53 0.67 -1.53 -1.34 -1.39 -1.14
-1.82 -3.01 -1.43 -1.61 -1.46 -0.98 1.19 -0.38 1.57 1.13 1.56 0.54 -2.26 -0.69 - -0.8
-0.84 -0.22 -0.9 -0.1 -0.58 0.16 0.7 -0.52 1.02 1.05 0.71 0.23 -0.89 -1.01 -0.93 -0.87
0.13 -0.98 -0.52 -0.66 -0.57 -0.61 0.47 0.04 0.84 0.44 0.15 0.59 -0.33 -0.24 -0.24 0.09
-0.37 -0.58 -0.98 -0.84 -0.77 -0.2 0.55 0.08 0.52 0.24 0.54 0.2 0.26 0.07 -0.07 0.15
-1.33 -1.75 -1.25 -1.94 -0.78 -1.09 0.8 -0.09 0.6 0.25 0.34 0.39 0.66 0.48 0.54 0.25
-1.5 0.08 -0.66 -0.81 -0.35 -1.29 0.24 0.08 0.6 0.51 0.87 1.28 -0.43 -0.77 -1.21 -0.0
-3.79 -0.72 -1.44 -0.46 -1.22 -0.53 1.15 0.13 0.98 1.32 1.28 1.42 -4.17 -4.47 -5.11 -3.47
-0.5 -0.33 -0.97 -0.76 -0.44 -0.15 0.72 -0.58 0.77 0.78 0.37 -0.04 0.16 -0.31 -0.75 0.3
-0.55 -0.85 -1.01 -0.42 -1.29 -0.57 0.62 -0.49 0.16 0.54 0.67 -0.05 0.67 0.15 -0.33 0.64
-3.07 -2.07 -1.11 -0.36 -1.09 -0.42 1.34 0.01 1.09 0.88 1.53 0.59 -1.05 -1.8 -3.12 -1.38
-1.06 -0.57 -0.99 -0.72 0.17 -0.14 0.07 -0.52 0.61 0.86 0.82 1.34 -0.5 -1.01 -1.2 -0.56
-0.31 -0.59 -0.95 -1.1 -0.2 -0.39 0.78 -0.28 0.35 0.57 0.56 1.14 -0.6 -0.63 -0.39 -0.19
-1.9 -1.39 -1.7 -2.6 -0.47 -1.72 -0.11 -1.1 -0.42 0.05 -0.38 0.24 1.74 1.11 -0.07 1.19
-0.29 -0.05 -1.77 -1.57 -1.27 -0.96 1.07 0.87 0.28 0.18 0.84 0.51 -0.26 -0.56 -0.57 -0.04
-0.28 -2.02 -0.94 -0.75 -0.66 -0.49 0.35 0.01 0.01 0.12 0.37 0.29 0.76 0.52 0.14 0.44
-3.98 -1.05 -1.51 -0.18 -0.53 -0.01 0.39 -0.06 1.39 1.27 1.69 0.84 -4.14 -4.85 -4.28 -3.88
-0.32 -0.33 -0.81 -0.5 -0.45 -0.34 0.93 0.62 0.29 0.49 0.56 0.54 -0.84 -0.86 -0.61 -0.26
-1.24 -1.72 -2.17 -2.47 -2.35 -1.23 -0.74 0.01 -0.39 -0.38 0.19 0.46 1.25 1.01 0.61 1.43
-3.05 -1.31 -0.22 0.23 0.07 -0.9 1.43 0.04 0.97 0.89 1.2 0.84 -3.92 -4.23 -4.76 -3.62
-0.19 -0.79 -0.61 -0.43 -0.86 -0.4 0.4 -0.3 0.16 0.28 0.36 -0.18 0.72 0.03 -0.16 0.73
-0.36 -2.23 -2.68 -2.35 -1.37 -0.78 0.2 -1.43 0.68 0.35 0.82 -0.51 1.06 0.86 0.4 0.69
-1.87 0.1 -0.17 -0.04 -0.56 -0.53 0.6 0.13 0.97 0.76 0.92 1.23 -2.2 -2.58 -2.33 -1.56
-0.62 -0.25 -0.86 -0.3 -0.29 0.1 0.3 -0.41 0.77 0.93 0.97 0.58 -0.68 -1.17 -1.89 -0.23
-1.02 -3.13 -2.6 -2.12 -1.28 -1.39 0.36 0.65 0.24 0.07 0.57 0.68 0.96 0.77 -0.08 0.51
0.03 -1.3 -1.68 -1.19 -1.14 -0.58 0.12 -0.4 0.82 0.46 0.71 0.16 0.24 0.31 -0.18 0.73
-7.28 - -1.88 -2.84 -2.11 -1.43 -0.97 -2.42 0.02 0.02 0.03 -1.05 1.84 1.49 0.61 1.5
-0.57 -0.65 -0.83 -0.84 -0.52 -1.13 0.24 0.04 0.25 -0.2 -0.09 -0.09 0.96 0.22 0.26 0.97
-0.61 -1.05 -0.47 0.1 -0.26 -0.14 1.05 -0.51 0.65 1.0 1.12 0.77 -1.78 -2.26 -1.95 -1.57
-2.32 -0.32 -0.98 -0.27 -0.52 -0.56 1.53 0.03 0.55 0.64 1.51 0.81 -2.36 -2.68 -2.81 -1.95
-0.37 -1.01 -0.36 -0.65 -0.56 -0.42 0.42 -0.48 0.14 0.22 0.35 0.03 0.68 0.01 0.01 0.73
-3.59 -2.86 -1.91 -1.77 -1.26 -0.0 1.07 1.19 1.16 1.13 1.23 1.32 -4.85 -5.57 -7.2 -3.13
- -2.53 -1.92 0.5 -3.06 0.21 1.01 -1.76 1.62 1.08 1.47 1.37 - -5.19 - -
-2.59 -1.5 -1.28 -0.83 0.23 -0.1 0.65 -0.42 0.82 0.89 1.55 1.37 -2.16 -2.07 -2.36 -1.81
-0.73 -1.04 -0.4 -0.29 -0.24 -0.17 0.26 -0.13 0.85 0.56 0.41 0.29 0.19 -0.12 -0.4 -0.26
-6.67 -7.22 -1.61 -0.97 -3.35 -0.5 0.48 0.31 1.49 1.87 1.67 0.94 -5.2 -6.78 - -3.52
-0.27 -0.59 -0.55 -0.59 -0.39 -0.25 0.61 0.43 0.46 0.22 0.49 0.39 -0.2 -0.29 -0.59 0.09
0.18 0.04 -0.98 -0.3 0.05 -0.01 0.61 -0.53 0.36 0.59 0.9 0.79 -0.97 -1.45 -1.43 -0.65
-6.18 -7.52 -1.27 -0.68 -1.24 0.49 0.84 -0.32 1.75 1.12 1.36 1.04 -2.85 -5.12 -4.05 -2.98
-0.77 -1.32 -0.67 -0.22 -0.07 -0.29 0.48 0.34 0.71 1.04 1.09 0.39 -0.69 -1.46 -2.69 -0.29
-1.44 -2.29 -2.97 -2.38 -1.4 -1.06 -0.22 -1.38 -0.07 -0.77 0.27 -0.41 -0.07 -0.09 2.51 0.92
-0.2 -0.23 -0.4 -0.35 0.04 -0.18 0.26 -0.52 0.83 0.73 0.5 0.77 -0.54 -0.82 -1.27 -0.5
-0.64 0.69 -2.35 -2.55 -0.73 -0.45 0.97 -1.26 0.98 1.18 1.44 1.05 -2.45 -2.32 -3.61 -2.65
-1.25 -3.23 -1.31 -0.92 -0.31 -0.63 0.85 -0.43 1.29 1.15 1.11 -0.11 0.28 -0.88 -1.86 -0.42
-1.43 -2.4 -1.69 -2.07 -0.56 0.31 0.59 0.28 1.28 0.85 1.1 0.97 -0.69 -1.79 -2.88 -0.19
- - - -3.13 -2.32 0.59 -0.2 0.24 1.27 1.97 1.66 0.67 - - 0.08 -
-1.41 -5.15 -2.88 -3.1 -2.22 -1.52 0.45 0.15 0.9 1.63 1.35 0.25 0.36 -0.86 -1.16 0.39
-0.51 -0.74 -1.01 -0.59 -0.41 -0.42 0.59 -0.37 0.93 0.63 0.28 0.88 -0.6 -0.31 -0.21 -0.14
-0.84 -2.25 -2.78 -2.43 -2.13 -0.98 0.71 0.84 0.99 1.19 1.51 1.47 -1.75 -2.89 -3.73 -1.46
-12.6 -4.16 -0.53 -0.03 -0.57 -0.11 1.39 0.71 1.24 -0.01 1.23 1.44 -9.89 -10.99 - -
-0.74 -0.47 -0.98 -0.52 -1.34 -0.69 0.16 -0.81 1.13 0.39 0.63 0.12 0.42 -0.41 -0.43 0.87
-0.38 -0.8 -1.91 -1.58 -1.14 0.01 0.59 0.01 1.3 0.62 1.22 0.53 -0.85 -0.93 -1.6 -0.18
-0.4 -0.52 -0.41 -0.1 -0.74 -0.05 0.52 -0.64 0.93 0.37 1.19 0.97 -1.16 -1.01 -1.1 -1.41
-0.49 -1.32 -1.51 -1.29 -0.84 -0.65 0.55 -0.39 0.64 0.41 0.23 -0.0 0.69 0.75 0.08 0.37
-1.56 -1.84 -1.33 -0.63 -0.05 -0.61 0.89 -0.26 0.94 0.88 1.01 0.99 0.08 -1.4 -2.76 -0.58
-0.08 -0.66 -1.29 -0.46 -0.35 -0.11 0.3 -0.63 0.69 0.57 0.69 0.46 -0.14 -0.26 -0.44 0.18
0.08 -1.34 -0.74 -0.26 -0.87 -1.01 0.61 -0.47 0.28 0.64 0.68 0.25 0.33 -0.18 -0.64 0.55
-1.79 -3.11 -1.31 -0.75 -1.09 -0.64 1.62 0.12 0.3 0.82 1.66 0.88 -1.34 -1.68 -2.29 -1.33
-0.38 -0.74 -0.36 -0.21 0.29 0.15 0.45 -0.11 0.66 0.42 1.06 1.24 -1.71 -2.03 -2.87 -1.65
-0.69 -1.18 -0.4 -0.17 -0.57 0.01 0.41 -0.03 0.51 -0.02 0.58 0.4 0.12 0.17 -0.37 0.12
- - -1.86 0.08 0.62 -1.49 0.62 -0.99 0.23 0.12 1.81 1.76 -0.31 -2.04 -2.43 -1.53
-8.34 - -1.19 -0.33 -1.68 -1.9 1.65 -3.93 1.33 1.76 1.6 1.02 - - -6.26 -
-1.58 -2.85 -1.6 -1.14 -1.34 -1.35 0.5 1.25 1.07 1.12 1.36 1.27 -2.21 -2.29 -2.58 -1.57
-1.11 -3.0 -1.89 -1.56 -0.8 -0.81 -0.13 -0.21 0.39 0.91 0.48 -0.05 1.41 0.22 -0.85 0.98
-3.64 -1.52 -1.7 -0.79 -0.9 -0.07 0.96 -0.49 1.57 1.05 1.24 0.5 -1.17 -1.24 -1.5 -1.01
-0.38 -0.19 -0.25 0.34 -0.14 -0.08 0.82 0.1 0.51 0.41 0.65 0.71 -1.31 -1.44 -1.64 -0.97
-3.39 -2.41 -0.58 -0.09 -0.83 -0.07 0.76 0.29 1.27 0.39 1.54 1.32 -2.93 -2.8 -4.35 -2.24
-1.13 -1.32 -1.61 -1.64 -0.43 -0.47 0.61 -0.18 0.06 0.08 0.65 0.37 0.91 -0.05 0.1 0.8
-1.46 -2.21 -1.09 -0.11 -0.71 -0.18 1.27 -0.3 0.58 0.91 1.44 0.55 -0.86 -1.21 -2.27 -0.83
-4.8 -3.0 - - -2.47 -2.52 0.83 0.17 0.02 -0.83 0.45 0.64 0.55 1.21 1.41 0.72
-0.82 -0.42 -0.88 -1.03 -0.16 -0.4 0.53 -0.63 0.39 0.24 1.02 0.87 -0.02 -0.4 -0.42 0.1
-1.75 -1.52 -3.92 -3.23 -4.24 -3.11 0.41 0.01 -0.83 -0.78 -0.38 -0.02 0.77 1.38 1.59 1.3
-3.84 -1.01 -1.32 -0.5 -0.6 -0.88 1.34 0.12 0.76 1.32 1.5 1.16 -4.21 -3.97 -3.77 -3.96
-1.45 -1.68 -0.84 -1.14 -0.62 -0.08 1.15 0.27 0.96 0.57 1.29 0.9 -1.16 -1.41 -1.84 -1.15
-2.3 -0.63 -0.74 -0.9 -1.23 -0.44 0.02 -0.07 0.54 0.97 0.87 0.25 0.9 0.34 -2.58 0.2
-2.98 -2.51 -5.18 - -5.69 -5.86 -0.02 -0.45 -0.64 -1.75 -0.95 -0.17 1.62 1.45 1.67 1.36
- - -1.3 -0.94 -1.09 -0.8 0.34 -0.25 0.73 0.9 1.08 0.55 0.37 0.38 -0.01 0.29
-1.37 -1.56 -0.84 -0.57 -0.23 -0.36 1.04 0.05 0.71 0.71 1.17 1.2 -1.14 -1.32 -2.36 -1.12
-1.54 -0.78 -0.59 0.06 -0.38 -0.28 0.76 -0.29 0.64 0.49 0.86 0.97 -0.98 -0.76 -0.66 -0.32
-1.6 -1.96 -1.77 -0.68 -0.85 0.2 1.16 -0.65 0.8 0.23 1.54 1.23 -0.83 -1.56 -3.29 -0.38
-4.39 -0.28 -0.72 -0.11 -0.75 -0.85 0.38 -0.22 0.66 0.84 0.97 0.83 -0.09 -0.21 -1.1 -0.13
-5.44 -4.21 -2.27 -3.25 -2.88 -3.62 0.96 -0.46 0.7 -0.94 -0.2 0.16 0.12 1.68 1.29 0.89
-6.75 -7.51 -5.24 -2.73 -1.56 -1.92 1.06 -3.08 2.3 0.99 1.55 0.98 -0.79 -3.13 -5.21 -1.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.