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Heatmap: Cluster_151 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.33 -2.68 -1.43 -2.76 -1.32 0.27 0.6 0.31 -2.0 -2.27 -1.02 -0.75 1.69 0.74 -0.09 1.66
- - -4.73 -9.1 -0.79 -0.71 1.46 1.57 - - - - 1.38 1.43 0.86 0.98
- - -4.3 - -0.68 -0.74 0.25 0.42 - - - - 1.95 1.67 1.36 1.37
-2.94 -4.64 -3.03 - -1.02 -0.39 0.56 0.56 - -5.9 -4.3 -4.97 1.74 1.41 1.15 1.67
-0.48 -1.4 -0.74 -1.61 -0.34 -0.47 0.46 0.46 -3.64 -5.39 -1.45 -0.33 0.86 1.16 1.1 1.17
-2.54 -0.54 -1.03 -1.82 -1.0 -1.19 -0.41 0.4 -2.3 -6.33 -2.39 -1.88 1.81 1.32 0.45 1.72
-5.62 - -6.97 - -7.84 -5.68 -4.18 -4.65 - -7.32 -7.29 -5.81 1.87 1.98 2.66 0.93
- - -2.42 - 1.28 0.71 1.83 2.43 - - - - -0.31 -1.16 -0.75 -0.04
- - -1.7 -0.88 1.42 1.65 2.03 1.65 -3.59 - -0.85 0.59 - - - -
- - -4.96 -7.21 0.53 1.38 0.65 0.26 -4.27 -3.39 -4.42 -6.39 0.97 0.59 0.13 2.14
-1.17 -1.58 -2.63 -4.3 -0.69 -1.35 0.87 1.7 -4.07 -4.0 - -1.08 1.6 0.71 -1.74 1.74
-1.55 -0.35 0.51 -0.79 0.54 0.36 1.0 0.76 -0.32 -0.75 -0.22 -0.17 0.06 -0.45 -1.29 0.17
-4.27 -0.26 -0.4 -0.06 0.77 0.37 1.36 1.5 -0.07 -0.05 0.35 0.43 -3.44 -3.25 -3.2 -2.71
-2.3 -1.63 -3.65 -5.63 -3.55 -2.41 -1.01 -1.95 - - - - 2.01 2.26 1.6 1.33
-2.12 -1.76 -0.74 -0.43 1.63 -0.01 1.84 2.04 - -4.92 -1.98 0.08 -2.63 -5.73 -2.66 -0.59
-2.41 -4.53 -2.26 -3.63 -1.82 -0.67 -0.32 -0.43 -6.72 -7.98 -2.95 -1.85 1.91 2.0 0.79 1.63
-2.68 -2.13 0.05 -0.09 0.69 1.04 1.47 1.66 -0.26 -1.02 0.24 0.51 -4.64 -6.96 - -3.87
- - -3.85 - -1.19 -0.57 1.05 0.88 - - - - 1.47 0.99 0.45 2.26
-2.82 -4.9 -0.72 -1.94 1.14 0.35 2.0 1.54 -2.02 - -1.55 0.82 -0.13 -1.73 -4.24 -0.06
-2.62 -4.64 -1.54 -1.49 0.74 0.15 1.7 1.87 -1.7 -5.34 -2.17 0.76 -0.01 -0.6 -2.12 0.37
-5.0 - -1.82 -2.76 -1.4 -0.42 0.05 -0.26 - - -7.18 -3.48 1.98 1.91 -0.41 2.0
-5.54 - -0.51 -1.06 1.16 0.14 2.25 2.41 -7.12 - -1.89 0.16 - - - -
-7.58 -5.16 0.19 -0.2 0.37 0.23 2.19 2.02 -4.42 -5.16 0.83 -0.01 -5.88 - - -
-4.65 -6.09 -1.18 -0.59 -0.86 -0.68 -0.04 0.53 -4.71 -3.27 -2.24 -2.34 1.82 1.13 -0.7 2.12
- -4.4 -2.31 -1.57 0.56 -0.03 2.23 2.76 - - -1.66 -2.35 - -1.07 -1.0 -
-0.9 -0.82 -1.2 -1.29 -0.48 -0.31 0.02 -0.12 -1.65 -1.41 -0.74 -0.61 0.72 0.99 1.43 1.21
-2.4 -6.1 -0.2 -0.41 0.44 1.33 1.22 1.62 -5.01 -3.95 -0.87 -1.38 0.58 -0.3 -1.1 0.12
-3.51 -2.15 -2.26 -1.45 -1.29 -1.3 -1.0 -0.23 -1.86 -3.86 -2.83 -1.76 1.58 1.7 1.38 1.74
-1.98 -0.8 -1.73 -1.66 -0.47 -1.2 0.07 -1.09 -2.4 -3.26 -1.59 -1.56 1.56 1.46 1.08 1.63
-3.68 -3.19 -3.33 -5.32 0.02 -0.05 0.81 1.12 - - - - 1.74 1.05 0.93 1.3
-3.85 - -2.79 -1.64 0.13 0.91 2.29 1.8 - - -0.4 0.88 -0.71 -1.28 - -1.01
-0.74 -0.32 0.1 -0.66 0.09 0.36 0.9 0.9 -0.38 -1.6 0.04 0.08 0.14 -0.11 -0.9 0.08
-4.19 -5.15 -4.72 -6.74 -1.19 -2.76 0.76 0.43 - - -4.79 - 1.69 1.54 1.36 1.81
-3.54 -2.42 -1.26 -1.9 -0.57 0.56 0.92 0.41 -5.36 -5.3 -0.41 -0.65 1.71 0.84 -1.23 1.46
-2.29 - - -3.15 -0.03 -0.71 1.85 1.91 -2.91 -2.85 -2.81 - -1.57 1.42 1.73 -
-1.15 -4.18 -2.37 -2.81 -1.83 -0.97 0.61 1.01 -6.19 -7.45 -2.51 -0.74 1.76 1.39 -0.53 1.75
-0.47 -0.08 0.26 0.2 0.23 1.15 1.11 1.09 -2.34 -2.02 -1.64 -1.04 -0.08 -0.57 -1.21 0.0
0.8 -0.86 -0.71 -1.68 0.16 0.18 1.35 1.18 -1.8 -1.74 -0.81 0.81 -3.26 -0.36 -2.29 0.78
- -1.9 0.55 -0.22 1.02 -0.77 0.93 1.29 - - -0.69 0.01 - 2.16 - -1.57
0.01 -3.48 -0.39 -0.42 -0.27 -0.04 1.6 1.51 -2.31 -1.81 -0.98 0.29 -0.49 -0.89 -5.3 1.16
-0.34 -1.1 0.05 -0.58 0.19 0.06 0.77 0.89 -1.02 -1.88 -0.99 -0.18 0.62 0.46 -0.38 0.55
-0.03 -1.79 -0.06 -0.16 0.16 0.42 0.7 1.33 -0.65 -0.5 -0.26 -0.87 -0.08 -0.2 -0.37 -0.05
- - -1.29 -0.69 -0.79 -1.02 1.09 1.52 - - - - 1.64 0.66 0.33 1.56
-2.13 -2.88 -1.18 -1.14 0.4 0.72 1.01 0.95 - - -2.38 -0.37 0.08 -0.5 0.83 1.73
-1.37 - -0.38 -0.18 0.19 -0.7 1.37 1.9 - - -2.16 -1.26 0.06 -0.71 - 1.85
0.09 - -0.26 -0.23 -0.04 0.16 1.74 1.06 - - -2.02 0.88 -0.76 1.6 - -
-0.69 0.44 -0.76 -2.0 -0.19 -0.46 0.7 0.64 -2.14 -4.77 -3.79 -3.4 0.91 0.93 0.21 1.59
-2.44 -7.34 -2.9 -3.19 -1.29 -2.54 -0.68 -0.77 -5.29 - -5.19 -3.12 1.78 2.06 1.51 1.66
-0.37 0.07 -1.21 -0.64 -0.0 -0.08 0.97 0.56 -1.07 -1.17 -0.26 -0.69 0.59 0.35 -0.61 0.94
- - -1.68 - -0.97 -0.12 2.24 2.43 -0.49 - - -0.09 -0.77 -0.28 - 0.11
-1.03 -1.18 -1.42 -1.08 -0.78 -0.17 0.73 1.16 -1.65 -1.15 -0.45 -0.65 1.21 0.43 -0.48 1.23
-2.19 -8.09 -0.25 -0.08 -0.32 -0.39 0.55 0.88 -1.55 -1.41 -1.11 -0.48 1.36 0.7 -0.18 1.1
-1.29 -0.83 -0.9 -0.57 -0.68 -1.65 0.27 0.21 -2.07 -1.79 -1.67 -1.54 1.43 1.03 1.46 0.9
-0.99 -2.1 -1.4 -2.39 -0.68 -0.7 1.28 1.4 -3.65 -3.65 -2.97 -1.14 1.48 0.46 -1.87 1.69
-1.41 -0.39 -0.09 -0.3 0.64 0.68 1.94 2.25 -2.17 -0.37 - -4.76 -3.43 -3.2 - -2.97
- - 0.76 0.48 0.9 0.51 1.47 1.58 -5.02 - -0.53 -0.03 0.37 -3.22 - -0.38
-1.13 -0.44 1.4 -0.31 1.64 -0.31 2.07 1.25 - - -2.77 -1.0 - - -2.16 -
-0.95 -0.33 -0.59 -0.08 -0.1 -0.05 1.31 1.44 -3.3 -3.54 -3.6 -4.12 0.46 0.51 0.23 0.75
- -1.7 - - 1.01 - 1.17 1.98 - - - - - 0.11 - 2.68
-0.22 0.26 0.15 0.29 0.51 0.6 0.92 1.56 -2.32 -4.48 0.16 0.58 -2.16 -2.9 -2.23 -1.32
-4.32 - -4.28 -7.27 -3.77 -5.31 -2.1 -2.48 - - -4.93 -4.23 2.31 2.11 1.19 1.89
-1.41 -2.19 -0.74 -0.43 -0.64 0.87 1.71 2.12 -0.23 -0.63 0.15 -0.65 -5.27 -1.84 -2.71 -1.94
-3.17 -3.4 0.33 0.38 1.81 0.36 1.55 1.94 -0.87 -1.16 -2.88 -2.49 -2.84 -4.03 -3.65 -3.69
0.32 -1.38 -1.14 -1.69 0.78 -0.18 1.49 1.07 -2.49 -2.49 -1.05 -0.29 0.38 -0.15 0.11 0.22
-0.54 -2.62 -0.42 -0.47 0.37 -0.66 1.11 1.27 -2.55 -2.2 -0.8 -0.76 0.84 0.46 -0.07 0.6
-1.49 0.82 -4.41 -3.07 1.63 -0.27 2.25 1.21 - -2.19 -0.57 -3.85 -2.49 0.11 -1.52 -2.62
-4.35 - -1.48 -1.43 1.72 2.41 2.04 0.83 -7.62 - -2.48 -1.22 - -7.4 -4.33 -5.42
-6.0 0.53 -3.57 -2.5 1.48 1.27 2.17 2.07 -3.57 - -3.48 -2.26 - - - -
-3.35 -3.44 0.65 -0.57 0.48 0.75 1.56 1.97 - - -0.66 0.68 -0.58 - - -0.44
- - - - 0.84 - 2.04 2.15 - - - - - - - 2.5
-0.25 0.02 -1.35 -1.12 -0.13 -0.0 0.21 0.17 -0.26 0.2 -0.64 -0.51 0.56 0.41 0.12 0.91
-0.74 0.33 0.17 0.4 0.43 -0.87 0.85 0.87 -0.37 -0.6 -0.55 -0.17 -0.36 -0.3 -0.11 -0.63
-3.17 -2.29 -1.23 -0.81 -0.6 0.4 0.22 0.6 -5.72 -4.55 -2.0 -2.81 1.66 1.14 1.1 1.06
-0.99 -0.92 -6.71 - -0.99 -0.79 1.06 1.42 -2.76 -3.54 -4.09 -4.39 1.27 1.23 0.69 1.27
-2.57 - -1.6 -2.7 0.25 -0.87 1.84 2.56 - -8.01 -3.42 -0.25 -0.29 -0.11 -1.81 0.25
- -4.73 -6.77 - -0.67 -0.42 1.16 1.26 - - -6.05 - 1.45 1.04 0.99 1.66
-8.0 - -0.51 -1.57 -0.14 -0.16 2.59 2.61 - - -3.47 -0.08 - - - -
-4.56 -5.12 -0.83 -0.12 0.37 0.21 2.27 1.56 -3.35 -2.71 0.24 1.15 -1.62 -4.71 - -2.16
-3.07 -6.82 -4.72 -2.52 -2.3 -1.92 -0.48 0.01 -3.93 - -2.06 -2.43 2.12 1.75 1.09 1.65
-0.92 -1.0 -0.71 0.1 1.65 -0.33 1.14 2.04 -1.1 0.58 -1.27 -1.01 -3.3 -5.98 - -5.01
-0.78 -2.29 -1.64 -1.65 -2.73 1.67 2.21 1.79 -2.07 - -0.53 -0.36 -1.53 -1.63 - -0.33
-7.25 -5.42 -3.44 -4.52 -1.45 -1.3 -0.86 -0.42 - - -3.76 -2.06 2.19 2.37 -0.38 1.56
-2.6 -3.77 -2.49 -5.28 -1.38 -1.28 -0.59 -0.62 - - - -3.6 2.14 2.04 -0.73 2.09
-11.11 -6.05 -6.46 -4.98 0.56 1.05 1.01 0.43 -8.68 - -9.57 -8.47 1.41 1.19 0.98 1.08
-8.47 -2.38 -4.66 -4.81 0.32 0.67 0.84 0.38 -7.96 -8.34 -7.36 -7.09 1.43 1.35 1.25 1.1
- - - - 1.82 - 2.15 2.38 - - - - - - 1.5 -
-0.38 -1.48 -0.89 -0.72 -0.99 -0.17 0.38 0.02 -0.53 -0.87 -0.43 -0.59 1.15 0.96 0.91 0.43
-0.41 0.54 -0.63 -0.49 0.29 -0.22 0.98 0.52 -0.81 0.21 -0.21 -0.29 0.27 -0.27 -1.1 0.05
- - -5.7 -4.63 -1.08 -1.34 0.04 -0.12 -4.39 -6.65 -6.62 -6.72 1.36 1.86 2.34 0.83
- - -0.83 - -0.34 - 2.56 2.89 - - - - -0.14 -2.82 - -1.85
- - -1.81 -1.57 0.68 1.01 1.96 1.79 -4.23 - 0.35 1.0 -1.57 -4.99 -1.34 -1.7
- - -6.21 -5.88 -1.32 -1.87 -0.15 0.04 - - - - 2.04 1.73 1.54 1.6
-2.2 - -0.99 -1.34 1.57 2.02 1.81 0.89 - - - - 0.24 -0.59 - -0.62
-5.08 - -0.1 -0.44 1.08 1.11 2.17 1.48 -2.89 -2.3 0.08 -0.11 -4.71 -2.35 -3.74 -3.25
-2.34 -1.42 -1.87 -0.63 1.35 -0.44 2.1 1.7 -4.3 - -0.88 0.34 -1.96 -4.05 0.02 -1.08
- -0.0 - - 0.25 -1.87 0.63 0.08 - - - - 2.63 0.94 - 1.5
-4.79 0.46 0.51 -0.08 0.9 0.58 1.11 1.9 -5.42 -5.36 -0.81 -0.49 -0.18 -3.59 -3.11 -0.88
- - -0.22 0.16 0.96 -0.49 1.75 1.73 - - - - 0.87 -0.11 -1.69 0.7
-0.82 -1.91 -1.17 -2.08 -0.09 -0.48 0.75 0.75 -6.09 - -3.68 -2.64 1.45 1.33 -0.19 1.62
-3.39 - -0.61 -1.28 -2.47 -0.06 1.11 1.4 - - - -2.05 0.89 -0.2 1.87 1.18
-7.51 - -3.4 -4.07 -2.07 -1.48 -1.43 -1.61 - - -6.06 -3.47 2.22 2.8 -0.59 1.1
-2.57 -4.68 -1.71 -1.7 -1.68 -1.24 0.14 0.68 -2.44 -2.46 -1.02 -1.64 2.25 0.78 -1.45 1.9
-3.1 -3.11 -2.69 -2.3 -2.47 -1.8 -1.01 -0.89 -2.37 -3.01 -3.71 -2.65 2.12 1.65 -1.06 2.43
-2.63 0.29 -1.85 -2.11 1.5 1.05 1.45 1.81 - - - 0.7 -1.52 - -0.55 -1.65
- -5.45 -1.0 -0.48 -0.96 -0.77 1.53 2.02 - - -3.23 -3.34 1.71 -0.38 -0.43 0.79
- -5.38 -0.46 -0.44 0.39 -0.11 1.99 2.52 -1.19 -1.54 -1.51 0.19 - - -1.89 -
-1.24 -2.37 -0.85 -1.37 -0.57 -0.58 0.97 0.62 -2.86 -3.89 0.01 0.02 1.3 0.84 0.23 0.97
-3.76 -6.79 -1.51 -1.4 0.17 -0.1 1.81 1.98 -0.6 -0.66 0.91 0.18 -1.39 -1.65 -4.37 -0.66
-6.06 -2.7 -0.38 -2.8 0.47 -1.12 2.15 2.17 -0.98 -3.03 0.34 1.06 -3.93 -3.44 - -
-2.98 -0.83 -1.24 -2.11 -0.82 -0.84 0.42 0.01 -3.01 -5.27 -3.92 -1.79 1.59 1.22 1.7 1.06
-0.73 -8.58 -0.77 -0.94 0.5 0.21 2.1 1.82 -4.68 -5.84 0.44 0.55 -2.05 -1.37 -2.35 -2.26
-1.24 1.46 -1.55 -4.03 0.58 0.56 1.49 1.47 - - -2.69 -3.8 -0.12 -0.22 - 0.89
-0.82 -0.79 -1.72 -1.83 -0.04 -0.79 0.67 0.55 - -6.81 -1.05 -0.31 1.12 1.31 0.57 1.16
-0.99 -0.67 -1.53 -1.19 -0.16 -0.95 0.76 -0.0 -0.92 -1.71 -0.45 -2.1 1.26 0.93 -0.03 1.54
-1.2 0.29 -2.57 -2.8 -1.1 -1.08 0.58 0.11 -2.82 -4.47 -1.26 -2.54 1.2 1.43 1.04 1.43
- - -2.94 -1.91 -1.51 -0.92 0.16 0.32 - - - - 2.13 1.37 0.16 2.09
-4.49 -1.88 -0.71 -1.63 -0.29 -1.94 1.59 1.42 -4.91 -4.85 -0.77 0.06 1.12 0.08 -2.02 1.49
-2.91 - -1.07 - 0.87 1.23 1.07 2.05 - - 0.2 -1.49 -0.16 - 0.82 -0.28
-1.08 -0.18 -0.09 -0.91 0.09 0.33 0.98 1.39 -0.67 -0.69 -1.43 -0.55 0.01 -0.18 0.32 -0.32
- - -2.29 -3.48 -1.2 -1.29 0.49 0.6 -2.39 -2.07 -1.77 -2.23 1.78 1.27 0.99 1.67
-0.73 -1.6 -0.71 -1.48 -0.71 -0.39 0.81 0.74 -6.09 -3.91 -1.15 -1.02 1.36 0.86 0.28 1.43
- - - - -1.0 -2.06 0.92 1.07 - - - - 1.98 0.69 1.07 1.85
-1.14 -0.93 -1.76 -1.11 -0.3 0.41 0.87 1.09 -4.65 -3.37 -3.34 -1.93 1.38 0.95 -1.32 1.45
-3.28 - -2.59 -2.48 -3.46 -1.39 -1.27 -0.67 - - - -3.84 2.37 0.91 -3.51 2.77
-1.49 -5.61 -2.09 -2.71 -1.63 -0.19 1.0 1.39 -7.33 -7.27 -1.56 -0.91 1.72 1.25 -0.61 1.14
- -2.29 0.06 0.4 1.29 0.03 2.08 2.05 - - -3.08 -3.18 - -1.93 0.14 -
- - -0.65 -0.98 0.42 -0.96 2.39 2.39 - - -0.93 0.48 - - -0.78 -
-2.68 -5.24 -3.08 -3.33 -1.29 -2.37 -0.23 -0.42 - -5.02 -1.4 -2.77 2.16 1.24 1.09 1.95
-1.41 -0.17 -0.36 -0.86 0.12 0.18 0.82 0.96 -0.45 -0.74 -0.61 -0.86 0.39 0.77 -0.06 -0.07
-4.35 -4.14 0.28 -1.08 1.12 1.13 1.91 2.1 - - -0.39 -0.65 - -1.3 - -
- - -1.78 0.3 -0.08 -0.39 1.17 1.36 -1.17 -2.7 -2.67 - 0.12 2.53 - -1.59
-3.93 - -0.29 -1.76 0.2 -0.67 2.15 2.78 - - - 0.8 - - - -
- -1.6 -1.24 -1.4 -1.48 -1.54 -0.17 -0.65 - - - - 1.6 1.91 1.64 1.44
- -5.3 -0.98 -0.9 2.02 -0.29 -0.52 2.6 0.27 1.0 -6.55 -3.27 - - - -
- - -0.96 -1.17 -0.22 -0.35 0.38 0.67 - - - - 1.16 1.28 1.5 1.58
-3.07 -7.11 -0.11 -0.93 1.32 -0.17 1.19 2.12 -0.07 0.94 -1.54 -0.88 -2.53 -3.84 -1.77 -3.21
-9.84 -4.83 -0.06 -0.03 1.59 0.62 1.12 2.03 -0.7 -0.1 -0.45 -0.14 -5.35 -7.45 -8.19 -7.7
-2.13 - -2.5 -2.38 -2.14 -0.88 -0.47 0.01 - -10.14 -4.32 -2.26 1.91 1.8 1.56 1.3
-1.44 -1.67 -0.12 0.2 -0.97 -0.17 1.77 1.92 -2.22 -1.57 -1.05 0.2 -0.24 -0.6 -1.43 -0.77
-4.51 -4.26 -1.04 -1.8 0.27 1.51 0.88 1.77 -3.88 - -2.57 -1.67 0.2 0.85 0.85 -0.93
-0.59 -4.34 -0.9 -0.78 0.65 -0.58 1.55 1.94 -3.82 -1.65 0.43 0.33 -0.52 -1.56 -2.11 -0.15
-0.65 0.98 -0.89 -0.47 0.23 0.52 1.38 1.12 -0.94 1.15 -0.26 -0.24 -3.02 -3.88 -5.4 -3.2
-0.6 -2.04 -1.59 -2.19 0.16 -0.31 1.06 1.21 - -5.58 -3.55 -0.44 -0.08 0.31 2.13 -0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.